REL RCSB RCSB RCSB 2014-07-29 2014-08-06 2014-08-06 2014-09-03 Cryo-electron tomography of full-length glycoprotein from Ebola virus-like particles Tran EEH Simmons JA Bartesaghi A Shoemaker CJ Nelson E White JM Subramaniam S Ebola, glycoprotein, mucin-like domain Tran EEH Simmons JA Bartesaghi A Shoemaker CJ Nelson E White JM Subramaniam S Spatial localization of the Ebola glycoprotein mucin-like domain using cryo-electron tomography. J.VIROL. 88 10958 10962 2014 25008940 doi:10.1128/JVI.00870-14 Molecular structure of Ebola VLP full-length glycoprotein trimer Molecular structure of Ebola VLP full-length glycoprotein trimer trimer 1 Envelope glycoprotein Zaire ebolavirus Ebola
Envelope glycoproteins present on the surface of intact virus-like particles
3 trimer true Homo sapiens HEK 293T pVP40, pBeta-Lactamase-VP40, pmCherry-VP40, pEbola Zaire GP subtomogramAveraging particle 7.4
130 mM NaCl, 20 mM HEPES, 10% sucrose
200 mesh Quantifoil Multi-A
 ETHANE 100 77 FEI VITROBOT MARK III Blot for 6 seconds at 22 degrees C, 100% humidity, blot offset -2, plunge into an ethane slurry cooled by liquid nitrogen. FEI POLARA 300 FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 200 2.5 2.5 34000.0 GATAN LIQUID NITROGEN 81 GATAN GIF 0.0 20.0 2013-03-05 GATAN ULTRASCAN 4000 (4k x 4k) 37 150 -60 60
Subtomogram density was selected using an automatic selection program.
IMOD 5298 emd_6003.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 55 55 99 0 0 0 55 55 99 225.5 225.5 405.9 90.0 90.0 90.0 X Y Z -0.67349398 1.2895354 -0.00107782 0.12826303 4.1 4.1 4.1 0.217 AUTHOR Molecular structure of Ebola VLP full-length glycoprotein trimer, including the mucin-like domain
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 3CSY I K M O RIGID BODY FIT Chimera
Protocol: rigid body, automated fitting procedures
REAL
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