REL RCSB RCSB RCSB 2014-03-24 2014-07-30 2015-03-04 2015-03-04 Cryo-EM structure of Dengue serotype 3 virus at 28 degrees C Fibriansah G Tan JL Smith SA de Alwis R Ng T-S Kostyuchenko VA Kukkaro P de Silva AM Crowe Jr JE Lok S-M dengue virus Fibriansah G Tan JL Smith SA de Alwis R Ng TS Kostyuchenko VA Jadi RS Kukkaro P de Silva AM Crowe JE Lok SM A highly potent human antibody neutralizes dengue virus serotype 3 by binding across three surface proteins. Nat. Commun. 6 6341 6341 2015 25698059 doi:10.1038/ncomms7341 3j6s FULLOVERLAP Dengue virus serotype 3 Dengue virus serotype 3 1 Dengue virus 3 Dengue virus 3 D3/SG/05K863DK1/2005 Homo sapiens VERTEBRATES Aedes albopictus C6/36 VIRION STRAIN true false singleParticle particle 8.0
10 mM Tris-HCl, pH 8.0, 120 mM NaCl, 1 mM EDTA
ultra-thin carbon-coated lacey carbon grid
 ETHANE 100 100 FEI VITROBOT MARK IV Blotted with filter paper for 2 seconds prior to snap freezing FEI TITAN KRIOS SPOT SCAN BRIGHT FIELD FIELD EMISSION GUN 300 2.7 1.1 3.5 75000.0 FEI TITAN KRIOS AUTOGRID HOLDER 100 2011-10-27 GATAN K2 (4k x 4k) 836 20.4
The particles were manually selected.
each particle
 OTHER 6.0 OTHER MPSA, EMAN, EMAN2 6800 emd_5933.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 576 576 576 -288 -288 -288 576 576 576 668.16 668.16 668.16 90.0 90.0 90.0 X Y Z -11.46402168 10.51379395 -0.02014503 0.82981664 1.16 1.16 1.16 2.0 AUTHOR Cryo-EM reconstruction of Dengue serotype 3 incubated at 28 degrees C
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 3J27 A B FLEXIBLE FIT Chimera, Coot, NAMD/MDFF
Initially fitted in Chimera, model rebuilt in Coot, refined in NAMD/MDFF
real space correlation REAL
emd_5933.png