2026-06-03 REL PDBe INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY PDBe PDBe 2026-05-15 2026-06-03 2026-06-03 2026-06-03 National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) NIH R35GM122588 United States In situ subtomogram average of a ribosome bound to ribosome associated vesicle in primary neurons expressing KDEL tagged with mNeonGreen (mNeon-KDEL) Carter SD Jensen GJ Freyberg Z In situ, RAV, Neuron, cryo-ET, STA, RIBOSOME Martin-Solana E Carter SD Donahue EKF Ning J Glausier JR Preisegger MA Eisenman L Joseph PN Bouchet-Marquis C Wu K Mobini CL Frantz AN Puig S Hampton CM Kabbani N Jensen GJ Watkins SC Deisseroth K Fenno LE Gold MS Wills ZP Burkewitz K Das S Freyberg Z Ribosome-Associated Vesicles promote activity-dependent local translation. bioRxiv US 2024 38895376 doi:10.1101/2024.06.07.598007 2692-8205 EMDB EMD-58124 associated EM volume Ribosome bound to ribosome associated vesicle Ribosome bound to ribosome associated vesicle 0
Freshly isolated neurons were plated onto sterile, poly-D-lysine/laminin-coated 200 mesh Quantifoil R2/2 gold NH2 London finder grids (200 mesh)
Rattus Brain Hippocampal neurons subtomogramAveraging cell 7.2
Neurons were maintained in neurobasal medium supplemented with B27 (2%), penicillin/streptomycin (100 mg/mL), and 2 mM glutamine with two-fifths of the media replaced every 4 days (37C, 5% CO2).
 Quantifoil R2/2 GOLD 200 CARBON HOLEY ARRAY 5.0 ETHANE-PROPANE
Freshly isolated hippocampal neurons were plated onto sterile, poly-D-lysine/laminin-coated 200 mesh Quantifoil R2/2 gold NH2 London finder grids (200 mesh), and transfected with KDEL tagged with mNeonGreen (mNeon-KDEL)
 TFS KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 2.0 7.0 FEI TITAN KRIOS AUTOGRID HOLDER VOLTA PHASE PLATE GATAN K3 (6k x 4k) 2.4 1 C1 22.0 FSC 0.143 CUT-OFF EMAN2 164 5 164 EMAN2 EMAN2 EMAN2 PHASE FLIPPING AND AMPLITUDE CORRECTION EMAN2 PROJECTION MATCHING emd_58124.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 168 168 168 35 35 35 168 168 168 445.2 445.2 445.2 90.0 90.0 90.0 X Y Z -6.4135127 5.4192586 0.024455456 0.5397118 2.65 2.65 2.65 0.703 AUTHOR In situ subtomogram average of a ribosome bound to a ribosome associated vesicle in primary neurons expressing KDEL tagged with mNeonGreen (mNeon-KDEL). emd_58124_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 168 168 168 35 35 35 168 168 168 445.2 445.2 445.2 90.0 90.0 90.0 X Y Z -48.942869999999999 39.286414999999998 0.000068961584 4.847969 2.65 2.65 2.65 AUTHOR Half map 1 (unmasked) of an in situ subtomogram average of a ribosome bound to a ribosome associated vesicle in primary neurons expressing KDEL tagged with mNeonGreen (mNeon-KDEL). emd_58124_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 168 168 168 35 35 35 168 168 168 445.2 445.2 445.2 90.0 90.0 90.0 X Y Z -42.023020000000002 39.264569999999999 -0.000055956643 4.843251 2.65 2.65 2.65 AUTHOR Half map 2 (unmasked) of an in situ subtomogram average of a ribosome bound to a ribosome associated vesicle in primary neurons expressing KDEL tagged with mNeonGreen (mNeon-KDEL).