2026-04-08 REL PDBe INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY PDBe PDBe 2026-02-11 2026-04-08 2026-04-08 2026-04-08 German Research Foundation (DFG) SPP2416 project number BE 5417/2-1 Germany In situ ribosome structure from environmental sample of Pseudo-nitzschia Leisch N Pyle E Ribosome, Environmental Sample, Diatom, RIBOSOMAL PROTEIN Leisch N Baars S Beavis T Bertucci P Bhickta C Bonadonna M Brannon CM Burgues-Palau L Cherek P Chevalier F Decelle J Demulder M Dey G Dudin O Duke E Engel BD Flaum E Flori S Gallet B Guichard P Halavatyi A Hamel V Jacobovitz M Juery C Laporte M Mattei S Mikus F Mocaer K Moog K Olivetta M Pavie M Pepperkok R Perez-Boerema A Planat L Prakash M Pyle EW Rhodes CR Romero-Brey I Ronchi P Rosa H Ramos AR Saint-Donat C Schwab Y Shah H Steyer AM Svetlove A Toullec G Vincent F Wiegand T Wietrzynski W Yee D Zwahlen S An Advanced Mobile Laboratory to enable field-based microbial ecology and cell biology across scales. Biorxiv US 2026 41889812 doi:10.64898/2026.02.23.707475 2692-8205 EMDB EMD-56682 associated EM volume Pseudo-nitzschia sp. Pseudo-nitzschia sp. 0 Pseudo-nitzschia sp. subtomogramAveraging cell 7.5 ETHANE
Cell extracted from natural environment.
 TFS KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 2.0 7.0 FEI FALCON IV (4k x 4k) 2.24 1 C1 28.65 FSC 0.143 CUT-OFF Warp 388 2 643 Warp Warp PHASE FLIPPING AND AMPLITUDE CORRECTION MAXIMUM LIKELIHOOD RELION 4 emd_56682.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 84 84 84 0 0 0 84 84 84 679.392 679.392 679.392 90.0 90.0 90.0 X Y Z -0.022441559 0.047934942 0.00029944192 0.0044760727 8.088 8.088 8.088 0.0175 AUTHOR Filtered map after FSC estimation. emd_56682_msk_1.map emd_56682_additional_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 84 84 84 0 0 0 84 84 84 679.392 679.392 679.392 90.0 90.0 90.0 X Y Z -0.016981747 0.046617027 0.00028087955 0.004036039 8.088 8.088 8.088 AUTHOR Map denoised by M. emd_56682_additional_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 84 84 84 0 0 0 84 84 84 679.392 679.392 679.392 90.0 90.0 90.0 X Y Z -0.019224277 0.042039413 0.000316522 0.0037047996 8.088 8.088 8.088 AUTHOR Map filtered by local resolution. emd_56682_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 84 84 84 0 0 0 84 84 84 679.392 679.392 679.392 90.0 90.0 90.0 X Y Z -0.043250397 0.068148375 0.00033469146 0.0062519796 8.088 8.088 8.088 AUTHOR Unfiltered half map 2. emd_56682_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 84 84 84 0 0 0 84 84 84 679.392 679.392 679.392 90.0 90.0 90.0 X Y Z -0.042129863 0.06776297 0.0002641924 0.0062692636 8.088 8.088 8.088 AUTHOR Unfiltered half map 1.