Structure of the Chlamydomonas reinhardtii chlororibosome with factor pY

2026-06-24 REL PDBe INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY DATABASE_REFERENCES atom_site chem_comp_atom chem_comp_bond em_admin struct_ref _atom_site.auth_atom_id _atom_site.label_atom_id _chem_comp_atom.atom_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _em_admin.last_update _struct_ref.pdbx_seq_one_letter_code EXPERIMENTAL_SUMMARY em_admin struct_ref _em_admin.last_update _struct_ref.pdbx_seq_one_letter_code PDBe PDBe 2026-02-05 2026-04-01 2026-04-01 2026-06-24 Swiss National Science Foundation 216094 Switzerland Swiss State Secretariat for Education, Research and Innovation M822.00045 Switzerland Structure of the Chlamydomonas reinhardtii chlororibosome with factor pY Waltz F Kater L Engel BD chloroplast, ribosome, translation, chlororibosome Waltz F Lehner PA Van der Stappen P Kater L Pfeffer S Engel BD Chloroplast-encoded small subunit extensions reshape the Chlamydomonas chlororibosome. Biorxiv US 2026 41727112 doi:10.64898/2026.02.07.704542 2692-8205 EMD-56560 consensus EM volume

consensus map

EMD-56564 focused EM volume

SSU focus

EMD-56563 focused EM volume

LSU focus

28lu FULLOVERLAP EMDB EMD-56560 consensus EM volume

consensus map

EMDB EMD-56564 focused EM volume

SSU focus

EMDB EMD-56563 focused EM volume

LSU focus

EMDB EMD-56602 associated EM volume

Structure of the Chlamydomonas reinhardtii chlororibosome with factor pY

Chloroplast ribosome Chloroplast ribosome 0 Chlamydomonas reinhardtii mat3-4 Ribosomal protein S1 homologue Chlamydomonas reinhardtii 0.048345176 1 LEVO MRLSARTLAQRASLPARSTGVVSRRSLVAPAPARKANLATRVAAIEEQQTSFQGDEQPVEAALDPASILDVDPAAVEEMD LHELDQAQEDLLKWMMLDEATQEEDLDEMVDYDDFGDEEYADMYEEVEEMLEAVDYEFKVGDKVSGTVIEVDDDGAYVEI GAKAIAFCPVTECSFARLKTPLEALRPGMKRDFMVVEDEEEYGQVIVSLAAMEATTFWQRIRQLQEEDITVTVSVESVNK GGMLVKFGIYDGFIPVSQFGPSITPDNMESLVGFELQVKFLEVDEEAERLVFSHKRASSTVSNDIQGFKVGDVVAGVVQS VKPYGAFIDLGGVTGLLHVSQISHDRVLVLDKILQEGDKIKVMILSQDRERGRVTLSTKKLEPTPGDMLRDPQLVYEKAE EMAEQFRKRVEQAAQSAAEPQPDTLGAAPEGQPFVY Q70DX8 Small ribosomal subunit protein uS4c Chlamydomonas reinhardtii 0.030082120999999996 1 LEVO MSRYLGPRLRVIRRIGKLRGFTRKKPFRRVFKGFGGFKGKVIPPGQHGLTKLLKTRPYDSSESDYLIRLKVKQRLRFNYG ITERQLVNYVRKAKKIKESTGQVLLQFLEMRLDNIVFRLNMAPTIPAARQLISHGHIRVNNKKVNIPSYMCKPKDVISVA MKQRSLQLVNKNLQEYYRRMRFYKKRLEKTLPFILLKIKPLGLTSVTAAVELITKGNVRVNNKSVKTPNYICRPRDTVSL RTKQGIKKVFLKNYLKG P48270 bS6c Chlamydomonas reinhardtii 0.019096979 1 LEVO MATMQKSSVAVRSSSSANLVAARPIAQRLCFQPVVRQSAQQQRSSVGRAMPKVVAAAVAADAAAETVKLPAGYHWYETMI ILKPTLSDEERDRELAKFEAYLNKEECFNINALVRGRSKLAYPIKKEWEGIYVLYSYLARRQTARAVQQLLSNPEAGAED TVLRHITLCKQ A8J5Y7 Small ribosomal subunit protein uS7c Chlamydomonas reinhardtii 0.019163799 1 LEVO MPRRPINKKRTLLPDPVYNSVSVHMLVNRVLKSGKKSVAYRIVYNALKEIGDVTQKNPVEVFEKALDNVTPRVEVKPRRR AGAIQMVPRVLRLGDRARANSLRWIMEACDKRSGQPMVTKLKSEILDAYKKTGFAIRKKEELHKIAIANAMYAKKPQVII NAINLLVD P48267 Small ribosomal subunit protein uS8c Chlamydomonas reinhardtii 0.015916647 1 LEVO MKSHGLINDSIGDMLTRIRNACLAKKSSVSIPFTRLNQNIAQILEQEGFIQTYQVSLDSQDLTIRLKYRSKKIYRGKKKE SCITNLKRISKPGLRIYSNHKDILRILGGTGIVIVSTPEGLMTDREARLRGIGGELLCSVW P59775 Small ribosomal subunit protein uS10 domain-containing protein Chlamydomonas reinhardtii 0.018736728999999997 1 LEVO MAALTCRVRAFTTSRPQAARPQVGARPAVRRPVSIVRAVAESAVDVESYVDELDVPMAESTPLAAAGEKVRLRIRMRSYE KQLLEDCVAQIQAVAEATGAVFKGPVMLPTKRRIYCVLRSPHVNSNSREHFEIRSHHRLVDLKNLSAETVSMMMQWVPPS GVEVECSIA A8IWQ1 Small ribosomal subunit protein uS11c Chlamydomonas reinhardtii 0.014260867 1 LEVO MAKQTRKLTTNKTKKKIFRGVVHIQAGHHNTIVTITNIRGEVLCWSSAGACGFRGKRKSTSFAAKKAAETVARKSRDFTM KAAKILVTGPGQGRESAIREIFKAGIKVSVIREKTGIPHNGCRPPKKRSV Q7YKX3 Small ribosomal subunit protein uS12c Chlamydomonas reinhardtii 0.014637428999999999 1 LEVO MPTIQQLIRSARKKITKKTKSPALKSCPQRRGICLRVYTVTPKKPNSALRKVARVRLTTGFEVTAYIPGVGHNLQEHAVV LVRGGRVKDLPGVRYHIVRGSLDTAGVKNRVQSRSKYGVKMGSKTAAKTAGKK P14149 uS13c Chlamydomonas reinhardtii 0.018561682 1 LEVO MQTLSACRCVAGARPFTAVRPLPAARPMQAAAPRRAPLHIMNLRVNNVEIPNSKRIEVSLQYIFGIGETTAQTILRDTGV ENKKTYELNEEEINKLRSEVEKYTTEADLRRVVAQNIKRLKDIGCYRGRRHIMGLPVRGQRTKTNARTRKGKAKTVANKK KATK A8JDP6 Small ribosomal subunit protein uS14c Chlamydomonas reinhardtii 0.011776143 1 LEVO MAKKSMIQRELKRQKLVMKYATKRAALKEQIKQTTFLKEKLSLHRKLQQLPRNSSAVRLHNRCMITGRPKGYFRDFGLSR HVLREMAHQGLLPGVCKSSW Q9GGE2 30S ribosomal protein S15 Chlamydomonas reinhardtii 0.015817261 1 LEVO MQALQCKSGVFGKAAVARPVRVAAPSRARLAVCASYKNQENINLEKVPAFKRHDADVGSSEVQVARLSARIMQISAHLAQ NKKDFAARRGLEAILSQRKSLLQYMYKTDRDMYDRMVSEYKIRSVIVGDTRGAARKSEERS A8HWZ8 30S ribosomal protein S16, chloroplastic Chlamydomonas reinhardtii 0.014474052 1 LEVO MQALSAKRSLGSIQPFTSSRVAVARPARVATVIENRVALRFQRFGRKKLPFYRLVAIDSKKRRDGEPLEYLGWYDPLKKE TNLNAPAIKEWLAKGALPSETVENLLRKAYVMEPKVAKVVVPKDAVKV A8JDN8 Small ribosomal subunit protein uS17c Chlamydomonas reinhardtii 0.011767698 1 LEVO MQSATMRTSAFRPAAVSRRSAVTVRAVQEVKGVVVSTKMNKTVVVEAERLATDVTYQKRKKVTKRYMAHDESGALRVGDF VRLDGTRPLSKTKRFSVTEVLRKAD A8JGS2 Small ribosomal subunit protein bS18c Chlamydomonas reinhardtii 0.016315781999999997 1 LEVO MRGLKSNKPKPRIQKVSVRKFRRKVLSLSQILSRLRQKRNQKIEQQKRNKPIKPLIPPKTLVIVLKEKPEKTLYNRRYID YKHSGLLQRYIGLGGKILPRRQTRLTAKQQRFVAKTIKTARVMGLLPFVSKERSFFK O20032 Small ribosomal subunit protein uS19c Chlamydomonas reinhardtii 0.010463467 1 LEVO MSRSLKKGPFVADHLLKKIEKLNAKGKKVVIKTWSRSSMIVPPMIGHTIGVYNGREHIPVFVSDQMVGHRLGEFSPTRTY RGHAKKDKKAKR P59776 bS20c Chlamydomonas reinhardtii 0.018285581999999998 1 LEVO MQSTMLRAASAVRAFQPAKPTFAPVSRPAVERGALVVMAAEGKDAQKKKMPSPVKRALLSEERRVYNKSHKSACATRVKK VVKLAETLVAAPSKTEEEVKNLEKLISEAYTEIDKAVVKGILHENTAARKKARCARWKKTVLMAAGLYKPAADSPDFARY QKLVKA A8JDN4 bS21c Chlamydomonas reinhardtii 0.020793336 1 LEVO MLSTVTRQALAAKPFGTVQPRVAPRLAKCQMARKDSYMVEVEVAEDEPEDVAVRRYMKLVMQSRVVEKLRARRTKETKIE EYKRRFRERVEMRKAGIVDPTYDELYSAELDPKPFEDFFQLRRDEDPEGAYDGAGAGSDDIFGSFAGGTYTDTTRWGSGY PGGGYMNTSNSFGAQGGYMGGYMQ A8HPN4 30S ribosomal protein 3, chloroplastic Chlamydomonas reinhardtii 0.033397237999999996 1 LEVO MMLVRQVPCLAQRASARSAVRSRPAPFTPARRVFARAQADAALLEDDEVAYEVTNEDFELDENDPDLLLGLEAVELMGSD VDAMTAAAVAAEMESAEDKEEAARAVEDVMASKLAAGELSEAELSKVAAAVGDLEGAELDDFVPALASDRYAEAAVSSDD KALMEPLKLSKGELRNLLPQDWDQINVDFFSNKKDENIPLPEYRLNVLWTDKNLAVAIDQVYSRGQVSPLTEYYFWPRQD AWEELRINLESRPWISERDRIILLNRLTQLINFWQDEEVKHTVEEARAEFPDCAFAIA A8I8A3 cS26/PSRP8 Chlamydomonas reinhardtii 0.012985022 1 LEVO MLATPRASARPFTSARPAAKAPICPRRVTVRAAEEAVEAAPEAFEESMESGPRGRRSSVEKGMELKHFLPLPKPAHLVFI KPTVAVVAGTASRSSVGVKMSAGDQQLERYVVEYFARSVK A8I8A6 Plastid-specific ribosomal protein-7 Chlamydomonas reinhardtii 0.06013686299999999 1 LEVO MLRELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAF VNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLELKSAVAAEASAEESDDIITEPDREGADAT DDDEDVEVELEDGQVEVRADLPGFEDIPFVMEEADMDAEMSEAAIAALEADLDGAEIRYELEAPAYMEEVTGKVARIEDY GVFLEFEWNGKTLTGLLAKDEMKVPSSALSAEAQAALRAEWADTGFEMPAFVELPDDELDVKKYYQPGESVPAFVLESSL VDGRGISLTHFTDKEVSAEAVAAYEELEDDEDEELDKMMADAAGLEDEVLAFDPEALMEEDEGEEAGAAADAGDDAEYEG VSADGLEGANGNYALGATRSGLIKGKNGYQVAPMGLPSRPLNDAVTSSGLAILGTSEVDFDGDEVQLVDYWTSEAFDNIP KDVLKKLGLKMSYTEAGEAEFEERADFEATDVPFYLYGGDVESRAKEFVADLLSDDVDEAELPARAGRAPIVLAAAVQSQ Q5QEB1 16S rRNA Chlamydomonas reinhardtii 0.47637256199999994 1 CCAUGGAGAGUUUGAUCCUGGCUCAGGACGAACGCUGGCGGCAUGCUUAACACAUGCAAGUCGAACGAGCAAAGAUUUGU GUAGUGGCGAACGGGUGCGUAACGCGUAAGAACCUACCUAUCGGAGGGGGAUAACAUUGGGAAACUGUUGCUAAUACCCC AUACAGCUGAGGAGUGAAAGGUGAAAAACCGCCGAUAGAGGGGCUUGCGUCUGAUUAGCUAGUUGGUGGGGGUAACGGCC UCCCAAGGCCACGAGCAGUAGCUGGUCUGAGAGGAUGAUCAGCCACACUGGGACUGAGACACGGCCCAGACUCCUACGGG AGGCAGCAGUGAGGAAUUUUUCGCAAUGGGCGCAAGCGACGGAGCAAAGUGCCGCGUGCAGGAAGAAGGCCUGUGGGUCG UAAACUGCUUUUCUCAGAGAAGAAGUUCUGACGGUAUCUGAGGAAUAAGCACCGGCUAACUCUGUGCCAGCAGCC(G7M) CGGUAAUACAGAGGGUGCAAGCGUUGUCCGCAAUGAUUGGGCGUAAAGCGUCUGUAGGUGGCUCGUAAAGUCUAAUGUCA AAUACCAGGGCUCAACCUUGGACCGGCAUUGGAGUACUCACGAGCUUGAGUACGGUAGGGGCAGAGGGAAUUCCAUGUGG AGCGGUGAAAUGCGUAGAGAUAUGGAGGAACACCAGUGGCGAAGGCGCUCUGCUGGGCCGAAACUGACACUGAGAGACGA AAGCUGGGGGAGCGAAUAGGAUUAGAUACCCUAGUAGUCCCAGCCGUAAACUAUGGAGACUAAGUGCUGCCGCAAGCAGU GCUGUAGCUAACGCGUUAAGUCUCCCGCCUGGGGAGUAUGCUCGCAAGAGUGAAACUCAAAGGAAUUGACGGGGGACCGC ACAAGCGGUGGAUUAUGUGGAUUAAUUCGAU(2MG)(5MC)AACGCGAAGAACCUUACCAGGGUUUGACAUGUCAAGAAC CUCUCAGAAAUGGGAGGGUGCCCUAACGGACACUUGAACACAGGUGGUGCAUGGCUGUCGUCAGCUCGUGCUGUGAAGUG UAUAGUUAAGUCUCAUAACGAGCGCAACCCUCGUCUUUAGUUGCCAUUUGGUUCUCUAAAGAGACUGCCAGUGUAAGCUG GAGGAAGGUGAGGAUGACGUCAAGUCAGCAUGCCCCUUACAUCCUGGGCUUCACACGUAAUACAAUGGUUGGGACAAUCA GAAGCGACCUCGUGAGAGCUAGCGGAUCUGUUAAACCCAACCUCAGUUCGGAUUGUAGGCUGCAACUCGCCUACAUGAAG CCGGAAUCGCUAGUAAUCGCCAGUCAGCUAUAUGGCGGUGAAUACGUUCCCGGGUCUUGUACACACCG(4OC)CCGUCAC ACCAUGGAAGCUGGUUCUGCUCCAAGUCGUUACCCUAACCUUCGGGAGGGGGGCGCCUAAAGCAGGGCUAGUGACUAGGG UGAAGUCG(UR3)AACAAGGUAGGGCUACU(2MG)G(MA6)(MA6)GGUGGCCCUGGCUCAC NC_005353.1 Small ribosomal subunit protein uS2c Chlamydomonas reinhardtii 0.102698477 1 LEVO MLNKKPPYLILSLIMIKTQKSKQTAVRKLIPGNVISLKITAMGANNVGINEFTFGIPVLVPNAKLGETVQAKVLKILASK KIAIAKLIKVVTKTNATETNNLAALTPGATLDVTITKLGPNSTGIADLGNNYNNVNKLIVKKSAITIGEKVTVLVTRVKN GYAFGVATVSTQRLNQVSTSLTQNSFKGTKFTVVLPKNAKRYLKHLVFKVTTATAQNLSVNGFEQTLFKKGAVGLDTRIN NQNGSAGNLTTVPTNTILFVKPNLGAKLGDKVQIQIIKFASIENGTLTYNVAIAKIIKLNPLSTPQKKAFVRSSLRQMLK SGMHYGEKAIKCNARMKNYVWTRKKGTDTKVEARPLIKKGRNLINLLKTRRCLTKALAQLTKYAAKGKTFLFVGTKKAAS GLVARAALFSKKAFFVNTRWLGGMLTNWKTILKSISKIRPILKEKQMIIKDILEKRQTIKARLIQKALLLRKKSKLMLKK GRLLIQMLKQNNSNSTSGKQAVRFLFTEKTNLLNTKRKEFVSKGILLLEKRQQLVVKRQELITQSQTLKSKAIQLTNTYR NLLNNLICSRKKLRELKALLLVSHELYLFKQQAKQDNQNLYMVSYNKFKTLNSDYILSNPPKEILNKMVSIIKGQGLVIK NNNLNLKTANNAKTLILSQLLSKFSLFVPTIKTSINNLQNYISTQKTALNKVLALLNVVKTKMNVYVTLKTKLVAELRQI KQTLQTERNIIRVLRRKLKQIAAQKRFIKFLPKLRYLPTPVTKIEQTARFLVKKFVDPKMKYPMDSIYDKKLSRQSKKVA ASRKKKWQRLEKYLGGISNMTKIKEKQIANNVAIIIGQQEEMNAVRECQKLGIKMFHIVDTNCNPGLADHFIPANDDARN SIKFILGKFLTRIRLAHKIKVKFKKTSLKK A0A218N8X3 Small ribosomal subunit protein uS3c Chlamydomonas reinhardtii 0.082015938 1 LEVO MGQKVHPLGFRVGITKKHQSQWFARFQKYAYSQSVFEDHMLRTTLVNLFSNLEKESALATKQSKNRGATQPKAPKITQIK IERGLIPYEIGIQIHSNDCLSITKAIDNIKVSKDLVTNLQKTRKYLFKAGTQLKNASMQVSDNLNVAEGENSTMLKTKTS ASGTSVLKKRTFKIQTQKPTKGKFVFKGKRKQKKKLSKAVFMRLKNIKRRFKKRQTIKKRYLNIISKGLLIRKKGNLIIR NVKIKRKNKTARLTSRKSQPTLRSGSNLRDNLAPVKSKMQRFNNRMSKKFANLFLTKLNKQFLVRLKAIMKFWHNQNVTK APLGYNKKWSLAKSYALINNLKAKYLAKDILSLGSLRVQKLRKLISILEKKSLVKMETLRKDFITFGTLSKTRAFGYYQM ITFLKQLKELVTKIKKQTIANVTTKQELCCYNKLALNKTKIQNLIRAKSKQTKSITQKVVNNFVKLVDDNQAMANESRKI KWISYLKDLVNKHRTENIFYYLATIATARKDLNALKRYTKQHANFLFGVNVENAKENPNALLQRVTKTLTQYSKNPLVNN DFENAEGLTKLQTAFLTQIESQRKMYKANLALTPKISIKFFSVKTTNLLEKASTVADSIVDALEKRKAFRGVIKKAKEDL MLRSRVTRVKGVKIQVAGRLNGAEIARSEWVRAGRVPLQTLRANIDYAYRTANTIYGIIGVKVWIFKGYSKI Q08365 uS5c Chlamydomonas reinhardtii 0.072090727 1 LEVO MATIQSGVARAASRPQPKVAAGSISSLRVKPFTRATRSVLGAAPRQNVVPRAAEPEAVATEADDFTFSLSDAKKGNEYTA GDVEAALRFYSGEASAVGATNDEFVENVFGIEDADFFGDLDNNEAYDDEFIAAGIPEAAPKQRQGGKRGGEGEGAEDSDD IAAAKEAEAMKQIEEQMVLEAELQETGLDQEEEGTYKAVGPAVWDWMSDIAAEDDDEEISAVAAGGARSMAADVMAALPS DEEVFADLRNANLQDVDVETRDTIEFLLEDFDIENEVKAIPDNVEEVFSVPEFAGLGDADVARIDALLGEDISLPELDLS GLDFADIEDDGLEMSEEAVQKYVASLKSATGAELSEEQIKEIFADEPVQLVDVAAEAAVTMDGVDLTEPAIEALAESELV FNSVEDKLEDVDDVEEFRTELLALRAMPEANLEAPPEEEVEVLDQYLSASEQFIAAEEARKAQLAEKVIKGELSADVLEE EDGEYVDLEKELLMPDDMDDLVDADDFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVAT AVKRALVDAKKSVVRVPLVGAGTIPHRVEAKFNAARCVMVPAADGTGVLAGSSIRSVLELAGVQNVLAKRIGCRSLLNNA RCAVAALEQLRTLQEVSKARGVPMDRLLLPSSK A8J8M5 Small ribosomal subunit protein uS9c Chlamydomonas reinhardtii 0.021062168 1 LEVO MAILAKAVGRRKEAVAQVQIKEGNGLFIINNKSAQEYLHNDFYSLLAVKAPFDVLSTSKKADMVSPDLSLTNLESTFTNL MQFSGGENAVKFDTIVKVKGGGLMGQTEAIRLGISRALCLLSTNTNPSANQNNLPNIYIPEGEGEALAIPNASDIRKQLK DKGYLTQDSRVKERRKYGLKKARKASQYHKR O20029 Sigma 54 modulation/S30EA ribosomal protein C-terminal domain-containing protein Chlamydomonas reinhardtii 0.031825562

The proper sequence is A8J8B2, but in Uniparc

1 LEVO MALTLHQQRMAQIACRQQASGRVSVRPVLQLASTRVPVPYGPNMAVVATRPARSGLVVRAQSAKAAAGTVRIIIQGRKLP VTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAIDLVCDKI RAKLQKIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLFDKEEQLQRQFAELNRIYPANVMRSKTVVLADPIT VEEAIDALEAVGHSFYVFREMTTDTVQIVYKRESGGYGVIVPQMRD A0A2K3DSW0 cL38/PSRP6 Chlamydomonas reinhardtii 0.00721533

Proper ID is A8IMN3 but sent to Uniparc

1 LEVO MFALSAVSSRNVACQASQPRHKGAKHHARSRPIKYNRADKNHGPAKYEPLPTPPPALIVVSKAESK A0A835SZL0 5S rRNA Chlamydomonas reinhardtii 0.038858949 1 CCUUGGUGCUCUUUGCUCAGUUGGACCCACACCAAUCCAUCCCGAACUUGGUUGUGAAAAAGCUGAGGGGACUGAAGAAC UUUACGGGUCGCCGUCUGGAAUCUCAGUUCUAGUGCUAGGG X03271.1 3S rRNA Chlamydomonas reinhardtii 0.015149069 1 UACGAAGCAGCUGAAUCCUGCACCAUAGAUGGUGAAAGUCCAGUAGU bL33c Chlamydomonas reinhardtii 0.01143135 1 LEVO MQSVLRSSASALTNPMMGNKMSYRVSAAPVPTTTAFREVTTMAKKKGVRLIVTIECTESKGEGATPSRYCTQKNRKNTPE RLELMKYNPNLRRYTLHKEVK A8I1D3 bL34c Chlamydomonas reinhardtii 0.012987529 1 LEVO MASMLMSRVAAAPVKAVACMRSAMTTRAIAPITARPATSSFMGGSFAGSSMTRVAPARGGLVVMANAKKSIACTKEGTNR KRRRTSGFKARMATKNGRKVIKARRAKGRHSLCPASEGKSGGKK A8HQG3 50S ribosomal protein L35 Chlamydomonas reinhardtii 0.012106230999999999 1 LEVO MASLCMRSSLAPKVASRSSAFLASPVAPVRSVAPVKAAPTTVVVEAKLKTRKSAAKRFKVTGSGKVTARHAGKQHFNEKM TRDHIRDSSKMFVLSPANIYNATKCLPNSGVGGK A8JEP1 Large ribosomal subunit protein bL36c Chlamydomonas reinhardtii 0.004273327 1 LEVO MKVRASVKKMCDNCRVIKRKGKVMVICSNAKHKQRQG P59774 Large ribosomal subunit protein uL2c Chlamydomonas reinhardtii 0.03095577 1 LEVO MGIRFLQAYTPGTRNRSVSDFSELTDKNSTPEKALTVSLHRAKGRNNRGIITCRHRGGGHKRLYRQIDFRRDKIGVTAKV VRIEYDPNRNARIALLRYEDGEKRYIIHPRGLNIGDIIQSDLNAPILIGNSLPLRNIPLGAEVHNVEFQPGSGGQLARSA GAMVEILAKEGNFVTIRLPSKEIRLVSKNCWATVGQVGNIEAYNLTIGKAGRTRWLGKRPTVRGSVMNPVDHPHGGGEGR APIGRSRPVTPWGRPALGQLTRKPKKYSNTLIVKKRKK Q8HTL2 Large ribosomal subunit protein uL3c Chlamydomonas reinhardtii 0.027878425999999998 1 LEVO MALQQTRAFSGRMSLKSAAAPVRVSRASRARTVLVEARQFRKAMGVLGTKAGMMSYFTEDGLCVPATVIALEEGNVVTQV KTQDTDGYNAVQIGYKATAEKRVTKPELGHLKKAGVPPMRHLVEFKLKDRAAVEAYQPGQALDVAALLKEGEPVDIAGIT VGKGFQGTIKRWHHKRGAMSHGSKSHREHGSIGSATTPSRVFPGLKMAGQMGNVRMTVKNQSLLKVDTERHALVVKGSVP GKVGNVVEITPAKLVGVNW A8JE35 Large ribosomal subunit protein uL4c Chlamydomonas reinhardtii 0.025659525 1 LEVO MQTMRVAFRPAATSRSTVVTRASAVAAPASIPYKAADGSSKGTQQLALKVAEDSAKGLVHRYLVMVQQNARQGTASTLTR SEVRGGGKKPYAQKGTGNARRGSSVSPLFPGGGVTFGPKPKDWSISMNKKERRLALATALQSATADMIVVESLAGKLQDT KTKSMVALLEKLGANAMERKVLLITKEERPDVTLAGRNIAKLTMNTASAISVFDVLNADHIIIEDEALAHVQSFYGAAAP ASA Q84U22 Large ribosomal subunit protein uL5c Chlamydomonas reinhardtii 0.020267668 1 LEVO MTQRLKNLYTKTIVPKLTTNFNYSNMHEVPKIEKIVINRGIGDASQNQKIVESSLKELAMIAGQKGVVTRSKKAIAGFKL RQQMPVGVTVTLRGDRMYGFLDRLIHLALPRVRDFQGISSKSFDKKGNYSLGLEEQLMFPEIEYDKIDQVRGMDISIVTT AKTQEEGLALLKEFGLPFK Q8HTL1 Plastid ribosomal protein L6 Chlamydomonas reinhardtii 0.022275267999999997 1 LEVO MLTTRVKPFRAAAVSRSSRLCVVAKDSRIGRAPITVPKGVTVTLEGQLVRVKGPNGTLEQTLSPLVKIEQADGKLKLFKL ADDRVAMSQHGLNRSLVNNLVVGVSTGFEKRMEMVGTGYRAAVAGKDLTLNVGYSKPRVLAIPEGLKVVVEKNTTLVISG ADKVKVGDFCATIRRQRPPEPYKGKGIRYAGEVIKLKEGKGAGGKKK A8J503 Large ribosomal subunit protein bL9c Chlamydomonas reinhardtii 0.022043705 1 LEVO MRGAPVSRAAFKAAPVRAASSRTALVVEANKKVAKKTKIILISDIPNVGKEGEIKTVPVGYWRNFLLPNGMAKIASEGIL NQIRAKKEDEIRKKLEEKAQAQAFANALTTIGKFLLKKKTGEKDQIYGSVQVQEIADAIYQQTGRNVSDCEITVPEIKSV GTYECTIRLHPEVVGTFSVVIQKEKNQIKVTTTEPKKAKK A0A2K3D5T7 uL10c Chlamydomonas reinhardtii 0.025941159999999998 1 LEVO MQSSTMTLRGQRSQFGAKAFTSARVQRASLQVTNAITRQKKEQVVEVLKGKLEKSTVVFGLRFKGLDVPTVQKFRKILPA NTSVYVTKNSLMKVAVSQTKGWEALADKGCTGENAWVFVNEEEIAETVKAYFKFEEDLFVEAKKQAAKNVEVKRPTEVSC AVMSGQYLSPAELKRCENLPTKDQLYATIARLAKQPAQKLAVGIKAVPNKLAIAIKKVSELDDDKTKTVASVAKA A8HVP7 Large ribosomal subunit protein uL11c Chlamydomonas reinhardtii 0.018562955000000003 1 LEVO MAAVMPRSGVCLPTRSARLAFAPARVATANRKVTTMAAKVTGKIKLALPAGKANPAPPVGPALGSKGVNIMAFCKEYNAQ TSKMIGDIIPVEITVYEDRSFTFVLKTSPASILLKKAAGIDRGASKPNKENVGQVTRKQVAEIAAKKLVDTNATKVESVV RMIEGTAKNMGIKIVD A8ICE4 uL13c Chlamydomonas reinhardtii 0.024590453 1 LEVO MALTASKLSGRTAFTTERRVAVRAAFQSTRVAARVAPVSRVQSVVCKASATEFKGDLLNKSYYPTSADASNVNKRWYVID AEGQTLGRLASLAALYIRGKHLPTYTPSMDMGAYVIVINADKVTVSGKKPAAKTYFRHVTGRPGSWTIESFNELQARLPE RIIERAVKGMLPKGALGRDIKLHLKVYKGTKHDHEAQQPQDITKEISIKPKNGPGAAVLKAAKAQ A8HWZ6 Large ribosomal subunit protein uL14c Chlamydomonas reinhardtii 0.013466754999999999 1 LEVO MIKPLSYLNVADNSGARELMCIRALGGSYRESANIGDVIIAVVKDALPNMPVKRSDIVRAVIVRTRKGIRRENGMAIRFD DNAAVIINKEGNPRGTRVFGPIARELRDKNFTKIVSLAPEVL P11094 uL15c Chlamydomonas reinhardtii 0.025570533

Proper UNIPROT ID is A8JAL6 that has been sent to UniParc.

1 LEVO MQVASRASVRPFTAARQPRSLVVVNASSDARLRLHNLSPEPGSRRDEKRKGRGYAAGQGGTCGFGNRGQKARSGPSVRPG FEGGQTPLYRRLPKLRGIAGGMSAGLPDFVVVNLDDLEKHFNAGEDVTLAAVKEKVKSISGRDASLPLKVLGTGSLSKSL NVHATAFSESAKAAIEAAGGKAEVLAAKTKWTKKVADMAAKGMDYEKEKLKKRIDNLKAKGMFEERVPKAKPAAAAAGKK K Large ribosomal subunit protein uL16c Chlamydomonas reinhardtii 0.015500424999999998 1 LEVO MLSPKRTKFRKPHRGHLRGKATRGNKIVFGDFALQAQEPCWITSRQIEAGRRVLTRYVRRGGKLWIRIFPDKAVTMRPAG TRMGSGKGAPDYWVAVVHPGKILYEMQGVSETIARQAMRIAAYKMPVKTKFLTKTV P05726 Large ribosomal subunit protein bL17c Chlamydomonas reinhardtii 0.019188451 1 LEVO MATLQMARSGVFTSRASAPRAVVRAVVPVAPRSAQTSSFLGEATLVAPSSGMKWTMMRHGNRVKHLGRPADQRKALIRSL VTEVIRHGAIRTTKVKAMVIRKYVDHMITLAKDGSLHARRQAMAFLYDKDLVGNLFENAPERYAERPGGYTRVKTEPVLR RGDATEMAVIELV A8I3M4 Large ribosomal subunit protein uL18c Chlamydomonas reinhardtii 0.015818282 1 LEVO MQSTMFKATLAPTRPVSRAFTPVVCKAANKKASTQARHARLRKKLSGTTERPRMAVYKSNEHIYVQVIDDSKGHTLVSAS TVMKDLKESLESGANINAATAVGKKVAELCKAHNIEKVCFDRGGFQYHGRIQAVAEAAREGGLVF A8HNJ8 bL19c Chlamydomonas reinhardtii 0.016626418 1 LEVO MLASRSAVRPFVAGRRPTVACSAKLSLHTLRQDMARSQLKTNLPAVVVGDNVKVGLAVQEGNGKTRTQTLDGVIIAAHGA DSSRTLTFRRVFQGVGVELVMPVHSPAVQQIEFVRRGRVRRAKLFYLRERVGKSARLKEVVGVRAADVAAGKQ A8IW44 Large ribosomal subunit protein bL20c Chlamydomonas reinhardtii 0.013578073 1 LEVO MTRVKRGNVSRKRHKKILNMSKGFRGAASTLFRTANQQNMKALRYSYRNRRQKKRDFRRMWITRVNSAVRRYGLNYSEFM NYLKTHKIQLNRKVIAQLSICDPEAFMQLLLF P26565 bL21c Chlamydomonas reinhardtii 0.019516861 1 LEVO MALANMLSRKAGFATSRTSAPFVASRVSPVAAKARVSSAAPSFSRQQQSIVCQAAATAEVAEKKVHPSPLTIAAPATYAI VEIGGTQMFVEPGKWYTCNRLKVDVGSKIKFGRVLALKHEGKLTVGKPYLENVAVEAEVIEELRGPKVIVYKMRPKKHYR KKQGHRQDLSKFMVTSISA A8IP00 Large ribosomal subunit protein uL22c Chlamydomonas reinhardtii 0.018959348 1 LEVO MALRACSSSLVARSAARSVQPFRPAAVRPARIAPVARKTATVVCSAATDAPAAPVAEAVVGEVKSGVAHLKFQRGSADKI RRVLDVIRGRSYEEALVLCEYMPYRACEKIIKCLMSAAANAKHNKGALKTKLVVSECFADEGPVLKRARPRAQGRANLIM KPTFHMTIRVEERAQ Q84U21 uL23c,Large ribosomal subunit protein uL23c Chlamydomonas reinhardtii 0.012565778

N-ter extension present in the structure but not in the Uniprot sequence,N-ter extension present in the structure but not in the Uniprot sequence

1 LEVO (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) MLDLVKYPVITQKTYIALFKDRQYTFDVDLRLTKPQIKKVFETLFNVDVISVNTHIPPRQKIRVGLAQGYRPRYKRAIIT LKEGQSINYSLKNDN Q8HTL3 KOW domain-containing protein Chlamydomonas reinhardtii 0.018307616999999998 1 LEVO MATMLSARTSAFSGATLGRSVAPRAPISSRTTVCAPVAAYGDLPKIGGGRKWEHLELGPGGKALRVPMHVKKGDTVQIIA GKDKGKVGTIIKVLAKKGKVVVEGVNQGQKHLKPKMENETGQIKTLEFPIHHSNVMLYSKEKGVRSRVGHKVLETGKKVR YLVKTGEIID A8J9D9 bL27c Chlamydomonas reinhardtii 0.017208759999999997 1 LEVO MLASTIQSSVLRSSVRAAPAPKRALVIQNAHKKGSGSTKNGRDSNAKRRGVKVYGGQPVKAGGIIVRQCGSTWNAGDNCM LGRDFTVFSTVEGVVVFDKKRVKPEIHVYPADHPKAVAALAKTHTKQPAEGQQSRAERRKATYTSRKATLSVAQVAAPTT P A8INR7 Large ribosomal subunit protein bL28c Chlamydomonas reinhardtii 0.021945557 1 LEVO MSLSMRSSIVGQSLAFKPATAQVRVARVLTVDAKKVCDLTGKKRNKANSVCFSNKKSRKWQEPNLQNKKVFWEEGQRWVK LRICTKAIKTLENKGIATMAAEAGIDLWKLPFEDARPQRKAYLAENAGKVPVGSNPRAMKNAEKLASSKKQPKYPVYEEG GRIVFIRPGMEDLIFGKKEQQAAPEDQELKITLSE A8HWS8 uL29c Chlamydomonas reinhardtii 0.014965353999999998 1 LEVO MQVARAFTAVRPARSVAAPAQQRVSVVAMAKPTKLADFTGLSNEELVNKSNLLKRELAQTKWLQRTRGVGELKPGENQPQ PDPEKVPKGHLNKHIRRQIAQCLTLLRQRQAAEGVDRKEARRIEKRAALANGTM A8HXM1 bL32c Chlamydomonas reinhardtii 0.010639327999999998 1 LEVO MLALSSSRSAAFSATVRVQPARQVALAPSRSSLIVEAAVPKKKTSKSKTAIRKAAWKKEVLPYVEQALFKAKLALKEGSR DSADKDMVVSTQTEEKSE A8IUC3 50S ribosomal protein L31 Chlamydomonas reinhardtii 0.014777945999999998 1 LEVO MATLTSSRVTAFSGSRLGNVRIGQARRGVTAARMAKEGIHPQWFEEAKVICNGVEVMTVGGTKATYNVDIYSGNHPFYQG NRTTMVLDDGQLNKFKKRFAELEELAVVPILQAGKAEDPSAKEKPAAAANKKGKKK A8J3Z3 23S rRNA Chlamydomonas reinhardtii 0.769308625 1 CCCCGAGUAGCAUGGGGCACGUGAAAUCCCGUGUGAAUCAGCGAGGACCACCUCGUAAGGCUAAAUACUCCUGAGUGACC GAUAGCGAAAUAGUACCACGAGGGAAAGGUGAAAAGAACCCCUGUUGGGGAGUGAAAUAGAACAUGAAACCGUAUGCUGA CAAGCAGUGGGAGCAAGAGCUUGUGACCGCGUGCCUGUUGAAGAAUGAGCCGGCGACUUAUAGGGAGUGGCUGGGUUAAG GAGUAAAAUCCGGAGCCCAAGCGAAAGCGAGUCUGAAUAGGGCGCAAGUCACUUCUUAUGGACCCGAACCCGGGUGAUCU AUUCAUGGCCAGGAUGAAGCUUGGGUAACACCAAGUGGAGGUCCGAACCGACCGAUGU(5MU)GAAAAAUCGGCGGAUGA GCUGUGAAUAGGGGAGAAAUUCCAAUCGAACUCGGAGCUAGCUGGAUCUCCCCGAAAUGCGUUGAGGCGCAGCGGUAACG AGAACUGUCUUGGGGUAAAGCUACUGUUUCGAUGAGGGGGUCAUCCCGACUUACCAACUCGUGGCAAACUCAGAAUACAA GACAUGUCCGUAAACCAGUGAGACAGUGGGGGAUAAGCUUCAUUGUCAAGAGGGAAACAGCCCAGAUCACCAGCUAAGGC CCCUAAAUGGUCACUAAGUGGAAAAGGAUGUGAGAAUGCUGAAACAACCAGGAGGUUUGCUUAGAAGCAGCCACCCUUCA AAGAGUGCGUAAUAGCUCACUGGUAAAGCGUUCUUGCGCCGAUAAUGGCCGGGACUAAGUGACCUGCCGAAGCUGUGAUA UAAUUUAUAGGUAGGGGAGCGUUCCGCUCUCGGGUGAAGUUUUCACGUAAGUGGGGAUGGACGAAGCGGAAGUGAGAAUG UCGGCUUGAGUAACGAAAACAUUGGUGAGAAUCCAAUGCCCCGAAAACCUAAGGGUUCCUCCACUAGGUUCGUCCAUGGG GGGUUAGUCAGGACCUAAGACUAGGCCAAACGGCGUCGUCGAUGGAAAACAGGUUAAUAUUCCUGUACGAGUUAAAUUAU GAUCUGAGGGACGAAGGAGGCUAAGCUAGAACUGUUUUUGGAUUGCAGUGGAAGCGUUUAGACGUUGAGAGAUAGAAAAA AAGCUAUCUUGAGUGGAGACGUGAUCCCUAUUUGAUCGAGUAGCUAGUGAUGUCAUACUUCCAAGAAAAGCUCAUACAUC UUAUAAUUUAAUGACCUGUACCUGAAACCGACACAGGUAGGUUGGUAGAGAAUACCAAGGGGCGCGAGAGAACUCUCUCU AAGGAACUCGGCAAACUGGCCCCGUAACUUCGGAAGAAGGGGCACCCAUCCGUAACAAGGUGGGUCGCAGUGACCAGGCC CAGGCGACUGUUUACCAAAAACACAGGUCUCCGCAAAGUCGUAAGACAAUAUAUGGGGGCUGACGCCU(2MG)CCCAGUG CCGGAAGGUUAAGGAAGUUGGUUAUUUCGAAAAAAGCUGACGACCGAAGCCCCGGUGAACGGCGGUCGUAACUAUAACGA UCCUAAGGUAGCGAAA(5MU)UCAUUGUCGAGUAAGUUUCGAC(5MC)UGCACGAAAGGCGUAACGAUCUGGGCGCUGUC UCGGAGAGAGGCUCGGUGAAAUAGACUUGUCCCGUG(6MZ)AGAUGCGGACUACCUACACCUGGACAGAAAGACCCUAUG AAGCUUGACUGUAUCUUGGAAUUGGGUUUGGAAUCCUAAUGGGGAUCCUUGAAUCAGGACCCUUGACAGUUUCAGGUGGG CAGUUUAUUUG(OMG)GGCGAAUGCCUCCUAAAAGGUAACGGAGGCGUGCAAAGGUUCCCUCAGUCUGGACGGAAAUCAG ACAUUGAGUGUAAAGGCAAAAGGGAGCUUGACUGCAAGACCUACAAGUCGAGCAGGGGCGAAAGCCGGCCUUAGUGAUCC GACGGUGCCGCGUGGAAGGGCCGUCGCUCAACGGAUAAAAGUUACUCUA(2MG)GGA(H2U)AACAGGCUGAUCUUCCCC AAGAGUUCACAUCGACGGGAAGGUUUGGCA(OMC)CUCG(2MA)UGUCGGCUCAUCACAUCCUCGGUCUGUAGUAGGUCC GAAGGGUUGGGC(OMU)GUUCGCCCAUUAAAGUGGUACGUGAGCUGGGUUCAAAACGUCGUGAGACAGUUUGGUCCAUAU CCGGUGUAGGCGUUAGAGCAUUGAGAGUAGCCUUUCAUAGUACGAGAGGACCUGAAAGGACAUGCCAAUUGUGUACCAGU UCUCAUUCCAAUGGGAAACGCUGGGUAGCUACGCAUGGAUAGAUAACUGCUGAAAGCAUCUAAGUAGGAAGCUAAACUCA AGAUGAGUGCUCUCUAAGGCCGCGGCUAGACAAGCCGUUAUAUAGGUAUCAGGUGUACAGUCAGCAAUGGCUUUAGCCGA GAUAUACUAAAGGCCGUUU 7S rRNA Chlamydomonas reinhardtii 0.088325664 1 AAGGCGUACGGUGGAGACCUAGGCACUCAGAGACGAAGAAGGGCGCAGAUACCGGCGAUACGCUUCGGGGAGCUGGCAAC AAGCUUUGAUCCGAAGAUUCCCGAAUAGGGCAACCUCAUAGAACUACCUAUAUAAUUCAUAGUUAGGUAAGAGGCAACCC AGUGAACUGAAACAUCUAAGUAGCUGGAGGAAAAGAAAGCAAACGCGAUUCCCGUAGUAGCGGCGAGCGAACCGGGAACA GCCUAAACCUAUGUAUGUAGGGGUCGUGGGAA POTASSIUM ION 3.9098e-05 138 K MAGNESIUM ION 2.4305e-05 322 MG singleParticle particle 2.5 7.5 Quantifoil R2/1 COPPER CARBON HOLEY GLOW DISCHARGE 20 ETHANE 100 FEI VITROBOT MARK IV TFS KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 0.8 2.0 75000.0 TFS FALCON 4i (4k x 4k) 40.0 1 cryoSPARC PHASE FLIPPING AND AMPLITUDE CORRECTION BACK PROJECTION 2.6 FSC 0.143 CUT-OFF cryoSPARC 175058 MAXIMUM LIKELIHOOD cryoSPARC MAXIMUM LIKELIHOOD cryoSPARC emd_56602.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 512 512 512 0 0 0 512 512 512 544.3072 544.3072 544.3072 90.0 90.0 90.0 X Y Z -0.28945732 1.5380076 0.002138761 0.023718912 1.0631 1.0631 1.0631 0.107 AUTHOR ::::EMDATABANK.org::::EMD-56602::::