2025-12-24 REL PDBe INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY EXPERIMENTAL_SUMMARY citation citation_author em_admin _citation.journal_volume _citation.page_first _citation.page_last _citation_author.identifier_ORCID _em_admin.last_update DATABASE_REFERENCES citation citation_author em_admin _citation.journal_volume _citation.page_first _citation.page_last _citation_author.identifier_ORCID _em_admin.last_update PDBe PDBe 2025-05-27 2025-09-03 2025-09-03 2025-12-24 Swedish Research Council Sweden PrPfr hybrid state of the Pseudomonas aeruginosa bacteriophytochrome / PaBphP Bodizs S Westenhoff S Phytochrome, Bacteriophytochrome, Photoreceptor, Histidine kinase, CYTOSOLIC PROTEIN Bodizs S Fischer AM Cervenak M Prodhan S Maj M Westenhoff S Chemical Mechanism of Allosteric and Asymmetric Dark Reversion in a Bacterial Phytochrome Uncovered by Cryo-EM. J.Am.Chem.Soc. US 147 45701 45711 2025 41317121 doi:10.1021/jacs.5c17531 1520-5126 JACSAT Bodizs SA Fischer ALM Cervenak M Prodhan S Maj M Westenhoff S Chemical mechanism of allosteric and asymmetric dark reversion in a bacterial phytochrome uncovered by cryo-EM. Biorxiv US 2025 doi:10.1101/2025.08.21.671592 2692-8205 EMD-53913 consensus EM volume EMD-53914 focused EM volume EMD-53915 focused EM volume 9rcc FULLOVERLAP EMDB EMD-53913 consensus EM volume EMDB EMD-53914 focused EM volume EMDB EMD-53915 focused EM volume EMDB EMD-53916 associated EM volume
PrPfr hybrid state of the Pseudomonas aeruginosa bacteriophytochrome / PaBphP
 Photochromic heterodimerimer of the bacterial phytochrome PaBphP Photochromic heterodimerimer of the bacterial phytochrome PaBphP 0 1 Pseudomonas aeruginosa 0.16 Bacteriophytochrome Pseudomonas aeruginosa 0.08102370299999999 2 Escherichia coli BL21 LEVO MTSITPVTLANCEDEPIHVPGAIQPHGALVTLRADGMVLAASENIQALLGFVASPGSYLTQEQVGPEVLRMLEEGLTGNG PWSNSVETRIGEHLFDVIGHSYKEVFYLEFEIRTADTLSITSFTLNAQRIIAQVQLHNDTASLLSNVTDELRRMTGYDRV MAYRFRHDDSGEVVAESRREDLESYLGQRYPASDIPAQARRLYIQNPIRLIADVAYTPMRVFPALNPETNESFDLSYSVL RSVSPIHCEYLTNMGVRASMSISIVVGGKLWGLFSCHHMSPKLIPYPVRMSFQIFSQVCSAIVERLEQGRIAELLRVSTE RRLALARRARDADDLFGALAHPDDGIAALIPCDGALVMLGGRTLSIRGDFERQAGNVLQRLQRDPERDIYHTDNWPQPSE DSPDGGDCCGVLAIRFHRQESGWIFWFRHEEVHRIRWGGKPEKLLTIGPSGPRLTPRGSFEAWEEVVRGHSTPWSETDLA IAEKLRLDLMELCLNHAAEVDRMRQRLIAVLGHDLRNPLQSISMAAALLSSSDTRTTELRQHISASSSRMERLVSQILDM SRLQSGIGLTVNPVDTDVSQLVRQIVCETDVAYPGLVIEIAIDPQVRAVVDPDRYAQVAANLLSNARHHGLPGRPVLVTL TRQGDEVCLSVLNETSGLSEAQLANLFEPFKRESADNQRNRNGLGIGLYISQAIAQAHQGRIDVDCRDDVITFCLRLPVR QAETGSSS Q9HWR3 2.7.13.3 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid 0.0005856699999999999 2 LBV singleParticle particle 1.5 7.8 80.0 C4H11NO3 Tris 10.0 MgCl2 Magnesium chloride 150.0 CH3CO2K Potassium acetate UltrAuFoil R1.2/1.3 GOLD 300 GOLD HOLEY GLOW DISCHARGE AIR 40.0 ETHANE 100 277 FEI VITROBOT MARK IV TFS KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 50.0 2.7 0.8 2.0 105000.0 FEI TITAN KRIOS AUTOGRID HOLDER NITROGEN GIF Bioquantum 20 GATAN K3 BIOQUANTUM (6k x 4k) 5760 4092 1 14573 1.8 50.0 1 cryoSPARC 4.6 NONE 1 C1 2.8 FSC 0.143 CUT-OFF cryoSPARC 4.6 488190 NOT APPLICABLE cryoSPARC 4.6 NOT APPLICABLE cryoSPARC 4.6 emd_53916.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 400 400 400 0 0 0 400 400 400 331.2 331.2 331.2 90.0 90.0 90.0 X Y Z -53.038933 95.410870000000003 -0.00027775366 1.1529282 0.828 0.828 0.828 18.0 AUTHOR