2026-02-18 REL PDBe INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY PDBe PDBe 2025-04-09 2026-02-18 2026-02-18 2026-02-18 Swedish Research Council 2024-04107 Sweden Other government HORIZON-MSCA-2023-DN-01 action (project: TargetRNA, n. 101168667) Agence Nationale de la Recherche (ANR) ANR-10-INBS-0005-02 France Agence Nationale de la Recherche (ANR) ANR-17-EURE-0003 France Structure of Oceanobacillus iheyensis group II intron domains D1-D6 Jadhav SS Nigro M Marcia M Protein-free RNA cryo-EM, Ribozyme, Metalloenzymes, Splicing, RNA Kretsch RC Albrecht R Andersen ES Chen HA Chiu W Das R Gezelle JG Hartmann MD Hobartner C Hu Y Jadhav S Johnson PE Jones CP Koirala D Kristoffersen EL Largy E Lewicka A Mackereth CD Marcia M Nigro M Ojha M Piccirilli JA Rice PA Shin H Steckelberg AL Su Z Srivastava Y Wang L Wu Y Xie J Zwergius NH Moult J Kryshtafovych A Functional Relevance of CASP16 Nucleic Acid Predictions as Evaluated by Structure Providers. Proteins US 94 51 78 2026 40905273 doi:10.1002/prot.70043 1097-0134 0867 PSFGEY 9qtj FULLOVERLAP EMDB EMD-53353 associated EM volume
Structure of Oceanobacillus iheyensis group II intron domains D1-D6
 Group IIC Intron Group IIC Intron 0 1 Oceanobacillus iheyensis 0.156 RNA (461-MER) Oceanobacillus iheyensis 0.155816406
Group IIC intron
1 GUGUGCCCGGCAUGGGUGCAGUCUAUAGGGUGAGAGUCCCGAACUGUGAAGGCAGAAGUAACAGUUAGCCUAACGCAAGG GUGUCCGUGGCGACAUGGAAUCUGAAGGAAGCGGACGGCAAACCUUCGGUCUGAGGAACACGAACUUCAUAUGAGGCUAG GUAUCAAUGGAUGAGUUUGCAUAACAAAACAAAGUCCUUUCUGCCAAAGUUGGUACAGAGUAAAUGAAGCAGAUUGAUGA AGGGAAAGACUGCAUUCUUACCCGGGGAGGUCUGAUCGAAACGCCAAGCACUCUUGGUAACCCAUUCAGCAAUGGAUGGC UGAACGGUCAGAAGUCAGCAGAAGUCAUAGUACCCUGCAUACUCGAGAAUGUAAGGGGAAGGACGGAACAAUUAAGUUCG CUUAAUUGAACCGCCGUAUACCGAACGGUACGUACGGUGGUGUGAGAGGACGGGGGUUAGUCGCUCCCUUCUACUCUAUU A singleParticle particle 6.5
10 mM MgCl2, 150 mM KCl, 5 mM Na-MES pH 6.5
 Quantifoil R1.2/1.3 COPPER 300 CARBON HOLEY GLOW DISCHARGE AIR 0.00045000000000000004 ETHANE 100 295.15 FEI VITROBOT MARK IV TFS KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 0.8 2.4 GATAN K3 (6k x 4k) 36.0 1 PHASE FLIPPING AND AMPLITUDE CORRECTION 4FAQ 3.79 FSC 0.143 CUT-OFF cryoSPARC 71128 MAXIMUM LIKELIHOOD MAXIMUM LIKELIHOOD emd_53353.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 300 300 300 0 0 0 300 300 300 251.7 251.7 251.7 90.0 90.0 90.0 X Y Z -0.045260333 0.34352267 0.0013687059 0.013608527 0.839 0.839 0.839 0.0847 AUTHOR Wilt type full length self-splicing group IIC intron from Oceanobacillus iheyensis emd_53353_msk_1.map emd_53353_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 300 300 300 0 0 0 300 300 300 251.7 251.7 251.7 90.0 90.0 90.0 X Y Z -0.44557637 0.4915366 0.0010684992 0.05595802 0.839 0.839 0.839 AUTHOR emd_53353_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 300 300 300 0 0 0 300 300 300 251.7 251.7 251.7 90.0 90.0 90.0 X Y Z -0.4143817 0.47431454 0.0010511859 0.05554429 0.839 0.839 0.839 AUTHOR