2025-07-23 REL PDBe INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY DATABASE_REFERENCES citation citation_author em_admin _citation.country _citation.journal_abbrev _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_volume _citation.page_first _citation.page_last _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.title _citation.year _citation_author.identifier_ORCID _citation_author.name _em_admin.last_update PDBe PDBe 2025-02-27 2025-06-25 2025-06-25 2025-07-23 Agencia Estatal de Investigacion (AEI) PRE2020-096731 Spain Agencia Estatal de Investigacion (AEI) PID2019-107725RB-I00 Spain Agencia Estatal de Investigacion (AEI) RYC2020-029773-I Spain Cryo-EM structure of Thomasclavelia ramosa IgA peptidase (IgAse) active site mutant (S32-N876) Ramirez-Larrota JS Eckhard U Guerra P Juyoux P Gomis-Ruth FX Protease, Metallopeptidase, Metzincin, HYDROLASE Ramirez-Larrota JS Juyoux P Guerra P Eckhard U Gomis-Ruth FX Biochemical and structural characterization of the human gut microbiome metallopeptidase IgAse provides insight into its unique specificity for the Fab' region of IgA1 and IgA2. Plos Pathog. US 21 e1013292 e1013292 2025 40627637 doi:10.1371/journal.ppat.1013292 1553-7374 9qa6 FULLOVERLAP Monomeric IgA peptidase active site mutant - E540A including the N-terminal domain Monomeric IgA peptidase active site mutant - E540A including the N-terminal domain 0 1 Thomasclavelia ramosa IgA protease Thomasclavelia ramosa 0.12808224999999998 1 Escherichia coli BL21(DE3) LEVO MASKPDIKVGDYVKMGVYNNASILWRCVSIDNNGPLMLADKIVDTLAYDAKTNDNSNSKSHSRSYKRDDYGSNYWKDSNM RSWLNSTAAEGKVDWLCGNPPKDGYVSGVGAYNEKAGFLNAFSKSEIAAMKTVTQRSLVSHPEYNKGIVDGDANSDLLYY TDISEAVANYDSSYFETTTEKVFLLDVKQANAVWKNLKGYYVAYNNDGMAWPYWLRTPVTD(CME)NHDMRYISSSGQVG RYAPWYSDLGVRPAFYLDSEYFVTTSGSGSQSSPYIGSAPNKQEDDYTISEPAEDANPDWNVSTEQSIQLTLGPWYSNDG KYSNPTIPVYTIQKTRSDTENMVVVVCGEGYTKSQQGKFINDVKRLWQDAMKYEPYRSYADRFNVYALCTASESTFDNGG STFFDVIVDKYNSPVISNNLHGSQWKNHIFERCIGPEFIEKIHDAHIKKKCDPNTIPSGSEYEPYYYVHDYIAQFAMVVN TKSDFGGAYNNREYGFHYFISPSDSYRASKTFAHAFGHGLLGLGDEYSNGYLLDDKELKSLNLSSVEDPEKIKWRQLLGF RNTYTCRNAYGSKMLVSSYECIMRDTNYQFCEVCRLQGFKRMSQLVKDVDLYVATPEVKEYTGAYSKPSDFTDLETSSYY NYTYNRNDRLLSGNSKSRFNTNMNGKKIELRTVIQNISDKNARQLKFKMWIKHSDGSVATDSSGNPLQTVQTFDIPVWND KANFWPLGALDHIKSDFNSGLKSCSLIYQIPSDAQLKSGDTVAFQVLDENGNVLADDNTETQRYTTVSIQYKFEDGSEIP NTAGGTFTVPYGTKLDLTPAKTLYDYEFIKVDGLNKPIVSDGTVVTYYYKNKNEEHTHNLTLVAAKAATCTTAGNSAYYT CDGCDKWFADATGSVEITDKTSVKIPAPGHTAGTEWKSDDTNHWHECTVAGCGVIIESTKSAHTAGEWIVDTPATATTAG TKHKECTVCHRVLETQPIPSTGTELKIIAGDNQIYNKASGSDVTITCNGDFAKFTGIKVDGSVVDSSNYTAVSGSTVLTL KASYLGTLTDGSHTITFVYTDGEANANLTVRTAGSGHIHDYGTEWKSNADNHWHECNCGDKKDEAAHSFKWVVDKEATAT KKGSKHEECKICGYKRSAVEILEHHHHHH Q9AES2 ZINC ION 6.5409e-05 3 ZN GLYCEROL 9.209399999999999e-05 1 GOL AZIDE ION 4.202e-05 7 AZI water 1.8015e-05 151 HOH singleParticle particle 8.0 ETHANE TFS KRIOS OTHER OTHER FIELD EMISSION GUN 300 0.8 2.0 TFS FALCON 4i (4k x 4k) 60.0 1 NONE 2.81 FSC 0.143 CUT-OFF 312476 MAXIMUM LIKELIHOOD MAXIMUM LIKELIHOOD emd_52972.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 320 320 320 0 0 0 320 320 320 233.6 233.6 233.6 90.0 90.0 90.0 X Y Z -0.2222569 0.42293027 0.00019271745 0.010342039 0.73 0.73 0.73 0.029 AUTHOR emd_52972_additional_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 320 320 320 0 0 0 320 320 320 233.6 233.6 233.6 90.0 90.0 90.0 X Y Z -0.0018041129 2.0770164 0.0010500869 0.023412129 0.73 0.73 0.73 AUTHOR emd_52972_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 320 320 320 0 0 0 320 320 320 233.6 233.6 233.6 90.0 90.0 90.0 X Y Z -0.30368927 0.52427304 0.00029669874 0.022269716 0.73 0.73 0.73 AUTHOR emd_52972_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 320 320 320 0 0 0 320 320 320 233.6 233.6 233.6 90.0 90.0 90.0 X Y Z -0.28540742 0.5133394 0.00029536468 0.022207666 0.73 0.73 0.73 AUTHOR