REL RCSB RCSB RCSB 2011-03-15 2011-03-23 2012-06-27 2012-06-27 Three-dimensional structure of Dengue virus serotype 1 complexed with HMAb 14c10 Fab Teoh EP Kukkaro P Teo EW Lim A Tan TT Shi PY Yip A Schul W Leo S Chan SH Smith KGC Ooi EE Kemeny DM Ng G Ng ML Alonso S Fisher D Hanson B Lok SM MacAry PA virus, dengue, serotype 1, mature virus, human antibody, neutralizing, serotype specific, Fab Teoh EP Kukkaro P Teo EW Lim AP Tan TT Yip A Schul W Aung M Kostyuchenko VA Leo YS Chan SH Smith KG Chan AH Zou G Ooi EE Kemeny DM Tan GK Ng JK Ng ML Alonso S Fisher D Shi PY Hanson BJ Lok SM MacAry PA The structural basis for serotype-specific neutralization of dengue virus by a human antibody. SCI.TRANSL.MED. 4 139ra83 139ra83 2012 22723463 doi:10.1126/scitranslmed.3003888 3j05 FULLOVERLAP Dengue virus serotype 1 with Fab fragment of human monoclonal antibody 14c10 Dengue virus serotype 1 with Fab fragment of human monoclonal antibody 14c10 120 Fab molecules bind to one dengue virion 2 Dengue virus 1
strain PVP 159
Dengue virus 1 Aedes albopictus INVERTEBRATES 240 3 VIRION STRAIN true false Dengue 1 antibody Fab fragment Homo sapiens Human blood CD22plus B cells secreted 50 monomer true Homo sapiens pTT5 singleParticle particle 8.0
120 mM NaCl, 12 mM Tris-HCl, pH 8.0, 1mM EDTA
lacey carbon copper grid
 ETHANE 100 OTHER
Vitrification instrument: Vitrobot
1 second blotting FEI TITAN KRIOS SPOT SCAN BRIGHT FIELD FIELD EMISSION GUN 300 2.7 0.76 4.9 47000.0 OTHER 100 2010-09-27 GENERIC GATAN 15 341 16
4k x 4k Gatan CCD
16.
The particles were selected manually.
Each particle
 OTHER 7.0 FSC 0.5 CUT-OFF EMAN, MPSA 2129 emd_5268.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 500 500 500 -250 -250 -250 500 500 500 950.0 950.0 950.0 90.0 90.0 90.0 X Y Z -12.802399640000001 18.50806618 0.0 0.99999994 1.9 1.9 1.9 2.5 AUTHOR cryo-EM reconstruction of a complex of Dengue serotype 1 with 14C10 antibodies
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 3G7T RIGID BODY FIT Chimera
Protocol: rigid body. The domains were fitted separately using Fit In Map feature in Chimera
correlation REAL