2026-03-04 REL PDBe INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY DATA_COLLECTION em_admin _em_admin.last_update EXPERIMENTAL_SUMMARY em_admin _em_admin.last_update PDBe PDBe 2025-01-28 2025-08-20 2025-08-20 2026-03-04 Other private THE HELEN AND MILTON A. KIMMELMAN CENTER FOR BIOMOLECULAR STRUCTURE AND ASSEMBLY Israel Hiregange DG Bashan A Yonath A Antibiotic, Lefamulin, RIBOSOME Hiregange DG Samiya S Mizgalska D Ben-Zeev E Waghalter M Rivalta A Rajan KS Halfon Y Breiner-Goldstein E Kaczmarczyk I Sroka A Taoka M Nobe Y Isobe T Paukner S Zimmerman E Bashan A Potempa J Yonath A Nucleic Acids Res. UK 53 2025 40444637 doi:10.1093/nar/gkaf458 1362-4962 0389 NARHAD EMD-52769 consensus EM volume

70S P. gingivalis ribosome W83 strain consensus map

EMD-52767 focused EM volume

Focus refined 50S map of 70S P. gingivalis ribosome W83 strain

EMD-52768 focused EM volume

Focus refined 30S body map of 70S P. gingivalis ribosome W83 strain

EMD-52770 focused EM volume

Focus refined 30S head map of 70S P. gingivalis ribosome W83 strain

9i5x FULLOVERLAP EMDB EMD-52769 consensus EM volume

70S P. gingivalis ribosome W83 strain consensus map

EMDB EMD-52767 focused EM volume

Focus refined 50S map of 70S P. gingivalis ribosome W83 strain

EMDB EMD-52768 focused EM volume

Focus refined 30S body map of 70S P. gingivalis ribosome W83 strain

EMDB EMD-52770 focused EM volume

Focus refined 30S head map of 70S P. gingivalis ribosome W83 strain

EMDB EMD-52641 associated EM volume

Porphyromonas gingivalis 70S ribosome (W83 Strain)

Porphyromonas gingivalis 70S ribosome (W83 Strain) Porphyromonas gingivalis 70S ribosome (W83 Strain) 0 2 3 46 4 5 6 7 8 9 10 11 12 13 14 48 47 15 16 17 18 19 20 21 22 23 24 25 26 27 28 44 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 45 1

70S ribosome of W83 strain

Porphyromonas gingivalis Small ribosomal subunit protein uS19 Porphyromonas gingivalis 0.009929733 1 LEVO MSRSLKKGPYINLKLEKKVLAMNESGKKAVIKTWARASMISPDFVGHTIAVHNGNKFIPVFVTENMVGHKLGEFSPTRTF RGHAGNKKK B2RLY8 Large ribosomal subunit protein bL28 Porphyromonas gingivalis 0.009027753 1 LEVO MSKICQITGKKAMVGNNVSHSKRRTKRVFDVNLFRKKFYWVEQDCWVVLRISAAGLRLINKIGLDAAIKRAAEKGFLNA B2RM15 Large ribosomal subunit protein uL29 Porphyromonas gingivalis 0.007499825 1 LEVO MKIAEIKELATKELQERLDAEVAAYDQMRINHAVSPLDSPAKLKHQRRMIAQMKTVLRQRELNK B2RLY4 Large ribosomal subunit protein uL30 Porphyromonas gingivalis 0.006700087 1 LEVO MAKIKIQQVRSRIRCPKDQKRTLDALGLRKLNQIVEHEATPSILGMVNKVRHLVLIVE B2RLX4 Large ribosomal subunit protein bL32 Porphyromonas gingivalis 0.006958198999999999 1 LEVO MAHPKRRQSKTRTAKRRTHDKAVMPTLAKCPNCGAWHIYHTVCGDCGYYRGKLAIEKEVAV B2RH62 Large ribosomal subunit protein bL33 Porphyromonas gingivalis 0.007356796 1 LEVO MAKKVKGNRVQVILECTEHKESGMPGISRYITTKNRKNTTQRLELKKYNPILRRMTLHKEIK B2RM14 Large ribosomal subunit protein bL34 Porphyromonas gingivalis 0.005761748 1 LEVO MKRTYQPSNRKRLNKHGFRSRMATANGRRVLAARRAKGRAKLTVSDEFVG B2RIL8 Large ribosomal subunit protein bL35 Porphyromonas gingivalis 0.007518082 1 LEVO MPKLKTNSGAKKRFALTGTGKIKRKHAFKSHILTKKTKKQKRNLTYFSTVHKVDENAVKQLLCLR B2RJD8 Large ribosomal subunit protein bL36 Porphyromonas gingivalis 0.004601648 1 LEVO MKVRASVKKRTPECKIVRRKGRLYVINKKNPKYKQRQG B2RLW9 23S rRNA Porphyromonas gingivalis 0.936413062 1 UAAGGGCAGACGGUGGAUGCCUAGGCUCUCGGAGGCGAAGAAGGACGUGAUAAGCUGCGAAAAGCUGCGGGAAUCGGCAC AUACGAAUUGAUCCGCAGAUAUCCGAAUGGGGCAACCCGUCAGGCCAAGGCCUGACACAUGAAUUGAUUUCAUGAGCGAA CGCGGGGAACUGAAACAUCUCAUUACCCGUAGGAGAAGAAAACAAAAGUGAUUCCCUCAGUAGUGGCGAGCGAACGGGGA UUAGCCCAAACCGGCUUUGUUUCGGCAAAGUCGGGGUAAUAGGACUUCGACAAAAGUUUAAUGAUAGAUAUAGGAGAACC UACUGGAAAGUAUGGCCGAAGAGCAUGAAAGCUGCGUAUCCGACAUAUCGAACAAUAGACGACGGAGCACCUGAGUAGCG CGGGACACGAGACAUCCUGUGUGAAUUGGCGGGGCCCAUCCCGUAAGGCUAAAUACUCCCGAGAGACCGAUAGUGAACCA GUACCGUGAGGGAAAGGUGAAAAGAACCUCGAACAGAGGAGUGCAAUAGACCCUGAACCCGUCUGCCUACAAGCGGUAGG AGCGCCAUUAAGGUGUGACUGCGUGCCUUUUGCAUAAUGAACCUACGAGUUACUGUUUGUGGCAAGGUUAAUUGUUAUAA UCAAGACAAGGAGCCGAAGCGAAAGCGAGUCUUAAAAGGGCGCCCAUUUAGUCACGAGCAGUAGACGCGAAACCAAGUGA UCUACCCUUGGUCAGGUUGAAGGUUAGGUAACACUAACUGGAGGACCGAAUCGGUAAGCG(H2U)UGAAAAGCUUUCGAA UGAACUGAGGGUAGGGGUGAAAGGCUAAUCAAACUUGGAGAUAGCUCGUACUCCCCGAAAUGCAUUUAGGUGCAGCCUG (H2U)UGGAUGUUAUCAUGAGGUAGAGCGACUGAUUGGAUGCGAGGGUUUCACCGCCUAUCAAGUCCAGAUAAACUCCGA AUGCAUGAUAAUUGACCGAUGGAGUGAGGGCAUGGGUGCUAAGGUCCAUGUCCGAGAGGAGAAGAAUCCGGACCACCGGC UAAGGUCCCGAAAUAAUUGCUAAGUUGUAAAAACGAAGUCAAGAAGCAGAGACAGCUAGGAUGUUGGCUUGGAAGCAGCC AUUCAUUUAAAGAGUGCGUAACAGCUCACUAGUCGAGGAUUUUGGCAUGGAUAAUACACGGGCAUAAGCAAUUUACCGAA GCCGUGGGAUAUAGUUAAUAUAUCGGUAGGGGAGCAUUCCAGCGACGUAGAAGGGAAAAGGGCGACUUUUUCUGGAGUUU CUGGAAAAGCAAAUGUAGGUAUAAGUAACGAUAAAGGGGGCGAGAACCCCCCUCGCCGAAAGACCAAGGAUUCCUGAUCA ACGCUAAUCGGAUCAGGGUUAGUCGGGGCCUAAGGAUAAGCCGAAUGGCGAUUCCGAUGGAAGAACCGGUUAAUAUUCCG GUACUGAUACUAGAGGCGAUGUGGUGACGGAGAAGUGACAGUCCGGCCGUCUGACGGAUUAGGCGGUUAAAGGGUGUAGA UGUUAUUCGGGGUAGGCAAAUCCGCCCUCAGAGUCGAACCUGACAGUACCGGAGUACAAGUACGAAGGGAUAAAGGACGU AACCCGGCUCCCAAGAAAACCCGCUAAGAUAUUUCUUGUGUUACCCGUACCGUAAACCGACACAGGUGGUUGGGUUGAGU AUACUAAGGCGCUCGAGAGAUUCGCGGUUAAGGAACUAGGCAAAAUGGUCCUGUAACUUCGGGAGAAAGGACGCCUGUCC CGGGACAGGCCGCAGAAACCAGGCCCAGGCGACUGUUUAACAAAAACACAAGGCUAUGCAAAAAAGCAAUUUGAGGUAUA UAGUCUGACACCUGCCCGGUGCUGGAAGGUUAAGAGGAGGAGUCAUGUCAAGGAGAAGCUCUGAAUUGAAGCCCCAGUAA ACGGCGCCGUAACUAUAACGGUCCCUAAGGUAGCGAAA(5MU)UCCUUGUCGGGUAAGUUCCGAC(5MC)UGCACGAAUG GUGUAACGAUCUGGGCACUGUCUCAACCGCGAUCUCGGUGAAAUUGUAGUAUCGGUGAAGAUGCCGAUUACCCGCAACGG GACGAAAAGACCCCGUGAACCUUUACUAUAGCUUUACAUUGUAUUGGGCAUCAGAUGUGUAGGAUAGGCCGGAGGCAGAG AAGCGGGUACGCCAGUAUUCGUGGAGUCGAUGUUGAAAUACGGCCCUUUUGAUGUUUGGGAUACUAACUCGCGGGUGGCG AGGACACUGUAUGGUGGGUAGUUUGACUG(OMG)GGUGGUCGCCUCCAAAAGCGUAACGGAGGCUUCUAAAGGUACCCUC AGGCCGAUUGUAAACCGGUCGCAGAGUGUAAUGGCACAAGGGUGCUUGACUGGGAGACAAACAAGUCGCACAGGUAGGAA ACUAGAGCAUAGUGAUCCGGUGGUCCCGCAUGGAAGGGCCAUCGCUCAAAGGAUAAAAGGUACUCCG(2MG)GGA(OMU) AACAGGCUGAUCACUCCCAAGAGUCCAUAUCGACGGAGUGGUUUGGCACCU(5OC)G(2MA)UGUCGGCUCGUCACAUCC UGGGGCUGGAGAAGGUCCCAAGGGUUGGGCUGUUCGCCCAUUAAAGUGGCACGCGAGC(PSU)GGGUUCAGAACGUCGUG AGACAGU(PSU)CGGUCUCUAUCUG(H2U)UGUGGGCGCAGGAAAUUUGCGAGGGUCUGACACUAGUGGACGAGGACCGU GUUGGACAGACCCCUGGUUUACCGGUUGUACCGCCAGGUGCACCGCCGGGUAUCCACGUCUGGUAAGGAUAAGUGCUGAA AGCAUCUAAGCACGAAGCCGGCCUCAAGAUAAGAUUUCCAUAAAAAGGGUGGUUAAAGACUAUGACCUUGAUAGGCUGCA GGUGUAUGAUUGGUAACAAUUAAGCCGAGCAGUACUAAUAGCCCAAACUUUUGUGCAU 5S rRNA Porphyromonas gingivalis 0.035186926 1 UCAGGUGGUUAUAACGUUGGGGAUCCACCUCUUCCCAUUCCGAACAGAGAAGUUAAGCCCAACGGUGCCGAUGGUACUGC GUCACAGUGGGAGAGUAGGACGCCGCCGA Large ribosomal subunit protein uL2 Porphyromonas gingivalis 0.029778553 1 LEVO MGIRKLKPTTPGQRHKVIGAFDKITASTPEKSLVVGKKKTGGRNNTGKMTMRYIGGGHKQKYRFIDFKRTKDGIPATVKT IEYDPNRSSRIALLYYADGAKAYIIAPDGLEVGHTVMSGSEAAPEVGNALPLANIPVGTIIHNIELRPGQGAKMVRSAGS FAQLTSREGTYVVIKMPSGEVRRILSTCKATIGSVGNSDHALEKSGKAGRSRWLGRRPHNRGVVMNPVDHPMGGGEGRQS GGHPRSRKGLYAKGLKTRAPKKHSSKYIIERRKK B2RLY9 Large ribosomal subunit protein uL3 Porphyromonas gingivalis 0.021925488 1 LEVO MPGLLGKKIGMTSVFSAEGKNLPCTVIEVGPCVVTQVKTLEKDGYSALQLGFVDAKEKHTTKPLAGHFKKANVAPKRHLA EFKNFEGEHKLGDVLNVEFFSDADFVDVVGTSKGKGFQGVVKRHGFGGVGQATHGQHNRLRAPGAVGACSYPAKVFKGTR MAGQMGNERVTVQNLEVIKVMPEHNLLLVKGSVPGAKGSILLIEK B2RLZ2 Large ribosomal subunit protein uL4 Porphyromonas gingivalis 0.023247879 1 LEVO MELSVYNIKGEDTGKKVVLDDSIFAIEPNDHAIYLDVKQYMANQRQGTHKAKERSELSGSTRKLIRQKGSGGARRGDINS PLLSGGARVFGPRPRNYSFKLNKKLKALARRSALSYKAKNNEIIVVEDFNFDAPKTKAFKAISAALKVGEKKVLYVLPEV NKNVYLSARNLPNTNLILANLINTYTVLASKNLVLTERSVAVVNELFKA Q7MTL4 Small ribosomal subunit protein uS10 Porphyromonas gingivalis 0.011468562 1 LEVO MSQKIRIKLKSYDYMLVDKSAEKIVKTVKAAGAMVSGPIPLPTHKRIFTVNRSTFVNKKSREQFELSSYKRLIDIYNSTA KTVDALMKLELPSGVEVEIKV B2RLZ3 Small ribosomal subunit protein uS11 Porphyromonas gingivalis 0.013857208 1 LEVO MAKKAVAKKKVVRVEAVGQAHIHSSFNNIIISLANSEGQVISWSSAGKMGFRSSKKNTPYAAQMAAQDCAKVAYDMGLRK VTVYVKGPGNGRESAIRTIHGAGIEVMEIIDVTPMPHNGCRPPKKRRV B2RLW7 Large ribosomal subunit protein uL13 Porphyromonas gingivalis 0.017075833999999998 1 LEVO MDTLSFKTISANKATVTKEWVIVDAEGQTLGRMCAKVAKLLRGKYKPNFTPHVDCGDNVIVINADKIVLSGNKWDGRIYL RHTGYPGGQRQFTPRDFMNKGPEYLFRKVVKGMLPKNRLGAKIIGNLYVYAGTEHKHEAQQPRQLDINSLK Q7MX43 Large ribosomal subunit protein uL14 Porphyromonas gingivalis 0.013086285999999999 1 LEVO MIQQESRLVVADNSGAKEALCIRVLGGTRRRYASVGDIIVVSVKSVIPSSDIKKGAVSKAVIVRTKKEVRRPDGSYIRFD DNACVLLNAAGDIRGSRIFGPVARELRGTNMKIVSLAPEVL B2RLY2 Large ribosomal subunit protein uL15 Porphyromonas gingivalis 0.01561607 1 LEVO MNLSSLKPAEGAVKSRKRIGRGPGSGLGGTSTRGHKGAKSRSGYSKKIGFEGGQMPIQRRLPKFGFKNINRVEYKPINLS VLQTLSEANSLTKISVEDLIAAGLVSRNSLVKILANGTVTTALTVEAHAFSKTAEEAIVRAGGSVVKL Q7MTN2 Large ribosomal subunit protein uL16 Porphyromonas gingivalis 0.016344123 1 LEVO MLQPKKTKFRRQQKGRMKGFAQRGNQLSFGSFGIKSLQSKWITGRQIEAARIAVTRYMQRQGQVWVRIFPDKPITKKGEG VRMGKGKGAPEGFVAPITPGRIIFEVEGVPYEIAKEALRLAAQKLPVTTKFVVRHDYDIQNQNA B2RLY5 Large ribosomal subunit protein bL17 Porphyromonas gingivalis 0.018074081999999998 1 LEVO MRHNKKFNHLGRKAAHRKAMLSNMAASLILHKRIFTTVAKAKALRIYVEPLLTKTKEDTTHSRRIAFSYLQNKYALKELF GDVAAKIADRPGGYTRILKTGYRLGDNAAMCFIELVDYNENMLGEAAKKATKTRRSRKRKSADVVVEAAPAEETPKAAEE B2RLW4 Large ribosomal subunit protein uL18 Porphyromonas gingivalis 0.012560597 1 LEVO MVTKEQRRQKIKARVRGKISGTQEKPRLTVFRSNKQIYAQLIDDIAGRTLASASSLKLEMTGSKKEIAAKVGDEIAKAAT EAGISTVVFDRNGYLFHGRIKELADAARKGGLKF Q7MTM9 Large ribosomal subunit protein bL19 Porphyromonas gingivalis 0.014120454 1 LEVO MDFIKIVNEEFKSGKEHPKFNSGDTITVEYRIKEGNKERIQKYRGVVIRISGHGDKKRFTVRKISDGIGVERIFPIESPF IENITVEKYGKVRRAKLYYLRGLTGKKARIKERRVALSSKD B2RGQ9 Large ribosomal subunit protein bL20 Porphyromonas gingivalis 0.013324705 1 LEVO MPRSVNHVASRAKRKRILKLTRGYFGARKNVWTVAKNTWEKGLTYAYRDRKSKKRNFRALWIQRINAAARLEGMSYSRLM GALHANGIEINRKVLADLAMNHPEAFRAIVAKVKN Q7MVQ8 Large ribosomal subunit protein bL21 Porphyromonas gingivalis 0.011843913 1 LEVO MYVIVDIQGQQMKVEQGRRLFVHHIKDVESGASVEFDKVLLVDNNGAITVGSPLVEGAKVVCEVLTPLVKGDKVLIFHKK RRKGYRKLNGHRQQFTEILVKEVVA Q7MX95 Large ribosomal subunit protein uL22 Porphyromonas gingivalis 0.01535775 1 LEVO MGARKHNSAEARKEALKQMYFAKLRNVPTSPRKMRLVADMIRGMEVNRALGVLKFSNKEASARVEKLLRSAVANWEEKNE RKAEEGELFVSRICVDGASTLKRLRPAPQGRGYRIRKRSNHVTIYVDTLNNDNN B2RLY7 Large ribosomal subunit protein uL23 Porphyromonas gingivalis 0.011116101 1 LEVO MGIIIKPIISEKMTAVTEKMSERYGFRVSPNANKIEIKKAVEAMYNVKVEDVNTMRYDGKRKNRYTKSGLIRGKEASFKK AIVTLKKGETIDFFSNI A0A134DR82 Large ribosomal subunit protein uL24 Porphyromonas gingivalis 0.011627664 1 LEVO MSKLHIKKGDTVMVISGEDKGHSGRVLEVLVKEQRAIVEGLNMIKKHAKPSAKNPQGGIISKEAPIHISNLNVVDPKTGK ATRIGRRLNENGKLVRYAKKSGEEIK B2RLY1 Large ribosomal subunit protein bL27 Porphyromonas gingivalis 0.009244612999999999 1 LEVO MAHKKGVGSSKNGRESESKRLGVKVYGGEMAKAGNILVRQRGTVHHPGENVGIGKDHTLYALKSGVVVFTRKKNDRSYVS IKTES B2RLC1 16S rRNA Porphyromonas gingivalis 0.496728156 1 ACAGUGGAGAGUUUGAUCCUGGCUCAGGAUGAACGCUAGCGAUAGGCUUAACACAUGCAAGUCGAGGGGCAGCAUGAUCU UAGCUUGCUAAGGUUGAUGGCGACCGGCGCACGGGUGCGUAACGCGUAUGCAACUUGCCUUACAGAGGGGGAUAACCCGU UGAAAGACGGACUAAAACCGCAUACACUUGUAUUAUUGCAUGAUAUUACAAGGAAAUAUUUAUAGCUGUAAGAUAGGCAU GCGUCCCAUUAGCUUGUUGGUGAGGUAACGGCUCA(5OC)CAAGGCGACGAUGGGUAGGGGAACUGAGAGGUUUAUCCCC CACACUGGUACUGAGACACGGACCAGACUCCUACGGGAGGCAGCAGUGAGGAAUAUUGGUCAAUGGGCGAGAGCCUGAAC CAGCCAAGUCGCGUGAAGGAAGACAGUCCUAAGGAUUGUAAACUUCUUUUAUACGGGAAUAACGGGCGAUACGAGUAUUG CAUUGAAUGUACCGUAAGAAACAGCAUCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGAUGCGAGCGUUAUCC GGAUUUAUUGGGUUUAAAGGGUGCGUAGGUUGUUCGGUAAGUCAGCGGUGAAACCUGAGCGCUCAACGUUCAGCCUGCCG UUGAAACUGCCGGGCUUGAGUUCAGUGGCGGCAGGCGGAAUUCGUGGUGUAGCGGUGAAAUGCAUAGAUAUCACGAGGAA CUCCGAUUGCGAAGGCAGCUUGCCAUACUGCGACUGACACUGAAGCACGAAGGCGUGGGUAUCAAACAGGAUUAGAUACC CUGGUAGUCCACGCAGUAAACGAU(7MG)AUUACUAGGAGUUUGCGAUAUACCGUCAAGCUUCCACAGCGAAAGCGUUAA GUAAUCCACCUGGGGAGUACGCCGGCAACGGUGAAACUCAAAGGAAUUGACGGGGGCCCGCACAAGCGGAGGAACAUGUG GUUUAAUUCGAUGAUACGCGAGGAACCUCAUUUGGGAUUGAAAUGUGGAUGACGGAUGGUGAAAACCGUCUUCCCUUCGG GGCUUCUAUGUAAGGUGCUGCAUGGUUGUCGCCAGCUCGUGCCGUGAGGUUCGGCUUAAGUGCCAUAAACGAGCGAACCC CACAUCGGUAGUUACUACAGUUUUCCGCUGAGGACUCUACCGAGAUGCCGUCGUAAGGCGUGAGGAAGGUGGUGGAUGAC GUCAAAUCAGCACGGCCCUUACAUCCGGGGCGACACACGUGUUACAAUGGGAGGGACAAAGGGCAGCUACCGGGCGACCG GAUGCGAAUCUCUAAACCCUUCCCCAGUUCGGAUCGGAGUCUGCAACUCGACUCCGUGAAGCUGGAUUCGCUAGUAAUCG CGCAUCAGCCAUGGCGCGGUGAAUACGUCCCGGGGCCUUGUACACACCG(4OC)C(5MC)GUCAA(2MG)CCAUGGGAGU CGGGGGUACCUGAAGGGCGAACCGCAAGGGGGCGCACUAGGGUAAACCCGGUGACUGGGGCUAAGUCG(UR3)AACAAGG UAGCCGUACCGG(MA6)(MA6)GGUGCGGCUGGAACCCUCCUUUCU Small ribosomal subunit protein bS6 Porphyromonas gingivalis 0.013613593999999998 1 LEVO MNNYETVFILTPVLSDAQMKEAVDKFTGLLKQEGAVIVNEENWGLRKLAYPIQKKSTGFYQLVEFQANPDVIAKLETNFR RDERVIRFLTFRQDKFAAEYAAKRRSLKAKTEEVKEA B2RIG3 Small ribosomal subunit protein bS16 Porphyromonas gingivalis 0.020703471 1 LEVO MATKIRLQRHGRKGYAFYKIVVADSRAPRDGKFIERIGSYNPNTNPATIDLNFERALYWIGVGAQPTDTARNILSREGVL MMKHLLGGVKKGAFDQAAAENKFEAWLKGKKDALNNMKAKVKEAAVADDKVKLEAEKAVNKARAEAVAEKKAAEAKAKAE AEAAAAAEEAAETEETPVEAAAEEAPAAESAE Q7MT66 Small ribosomal subunit protein bS20 Porphyromonas gingivalis 0.009711351 1 LEVO MANHISSEKRIRQTNARRLHNRYYARTARNAVKAFRALTDRTEAEKKYPVLASMLDRLAGKNIIHKNKAANLKSKLARRI NTLA B2RHR8 Small ribosomal subunit protein uS17 Porphyromonas gingivalis 0.010020758 1 LEVO MERNLRKERVGVVSSNKMDKTITVAVKWKEKHPIYGKFVNKTKKYHAHDEKNECGIGDTVRIMETRPLSRTKRWRLTEII ERAK B2RLY3 Small ribosomal subunit protein uS15 Porphyromonas gingivalis 0.010584465 1 LEVO MYLDSAKKAELFEKYGKSVKDTGSPESQIALFTFRIAHLTEHLRQNKKDFATERSLKMLVGKRRRMLDYLIKVDIERYRA IIKELGIRR B2RLH2 Small ribosomal subunit protein uS14 Porphyromonas gingivalis 0.009970877 1 LEVO MAKESMKAREVKRAKLVAKYAAKRAALKAEGNYEALQLLPKNASPVRLHNRCSMTGRPKGYMRQFGISRIQFREMASAGL IPGVKKASW B2RLX9 Large ribosomal subunit protein bL9 Porphyromonas gingivalis 0.019356210999999998 1 LEVO MQVILKEDVVNLGYKDDIVTVKDGYGRNFLIPQGKAVIASESAKKVLAENLRQRAHKIAQIKKEAEEKAASMQGISLTIK AKTSSTGTIFGSVTNIQIAEELAKKGVEVDRKIIVLKPAVKEVGNYTAVVRLHKEVTVEIPFEVVSENETIIEAKPEGAP VPVAEEPAAEAEQAEVAAE B2RIG5 Small ribosomal subunit protein uS13 Porphyromonas gingivalis 0.014023416999999998 1 LEVO MAIRIVGVDLPQNKRGFIALTYIYGIGRSSAITILDKAGVDRDIKVKDWSDDQAAAIRDVIGAGYKVEGDLRSEVQLNIK RLMDIGCYRGIRHRIGLPLRGQSTKNNARTRKGKKKTVANKKKATK B2RLW8 Small ribosomal subunit protein uS12 Porphyromonas gingivalis 0.014802225 1 LEVO MPTIQQLVRKGRESFADKSKSPALNSCPQRRGVCVRVYTTTPKKPNSAMRKVARVRLTNSKEVNAYIPGEGHNLQEHSIV LVRGGRVKDLPGVRYHIVRGTLDTAGVNGRTQRRSKYGAKRPKPGQAPAAKGKK Q7MTK9 Small ribosomal subunit protein uS3 Porphyromonas gingivalis 0.027620191 1 LEVO MGQKINPVSNRLGIIRGWDSNWYGGRKYGETLLEDSRIRQYLNARLAKASVSRIVIERALKLVTITICTARPGMIIGKAG QEVDKLKEELKRITKKDVQINIYEIRKPELDAAIVAENIARQLEGKIAYRRAVKMAIASAMRMGAEGIKIQVSGRLNGAE MARSEMFKEGRTPLHTLRADIDYALAEALTKVGLLGIKVWICKGEVYEKRDLAPNFAVAKNQSRRPNAQGGNNRGGDRNR RRKGNR B2RLY6 Small ribosomal subunit protein uS4 Porphyromonas gingivalis 0.022969440999999997 1 LEVO MARYTGPKSKIARKFGDPIFGADKVLSKKNYPPGQHGNNRRRKTSEYGLQLREKQKAKYTYGVLEKQFRHLFHRAQRAKG VTGELLIQFLEARLDNVVFRLGIAPTRSAARQLVSHRHITVDGSVVNIPSYSVKPGQVIGVRERSKSLEVIADALTGFNH SKYPWMEWDQSSLSGKLLHMPDRTDIPENIKEQLIVELYSK B2RLW6 Small ribosomal subunit protein uS7 Porphyromonas gingivalis 0.01813408 1 LEVO MRKAKPKKRQILPDPVYGDVRVTKFVNHLMYDGKKNTAFSIFYGALDIVKTKHSNEEKSALEIWKAALDNITPQVEVKSR RIGGATFQVPTEIRPERKESISMKNLILYARKRGGKTMADKLAAEIVDAFNNQGAAFKRKEDMHRMAEANRAFAHFRF Q7MTL0 Small ribosomal subunit protein uS5 Porphyromonas gingivalis 0.017870742 1 LEVO MAIVYNRVKSTNDLELKDRLVAINRVTKVTKGGRTFTFAAIVVVGNEDGVIGWGLGKAGEVPAAIAKGVEAAKKNLIRVP VHNGTIPHEQAASYGGASVFLKPATTGTGVKAGGAMRAVLDSVGVTDVLAKSKGSSNPHNLVKATIQALAEMRSPLMVAQ NRGISVEKVFKG Q7MTN0 Large ribosomal subunit protein bL25 Porphyromonas gingivalis 0.021028605 1 LEVO MKTFQLTGTPRAEFGKKAAKAIRKEDQIPAVLYGGKGEGVNFIVSQDAVRNLIYSPEIFLVELTVEGSGSYKAILKEIQF HPVTDRIIHIDFLQVTDEKPVVMEVPVVLTGHAEGVKAGGKLSLEMRKLKVKALYSEIPEKLDIDVSDLQLGKTIQVGEL HFEGLTLMNAKNAVVCAVKLTRAARGAAVKKQ B2RHF3 Small ribosomal subunit protein uS8 Porphyromonas gingivalis 0.014823507 1 LEVO MTDPIADYLTRLRNAIMAGHRVVSVPASNIKKEITKILFDKGYILNYKFEENDSQGIIKVALKYDLAHKVNAIKKLKRVS RPGLRKYVGYRDMPRVLNGLGIAIVSTPRGVMTDKEARELKVGGEVLCYVY B2RLX8 AURKAIP1/COX24 domain-containing protein Porphyromonas gingivalis 0.0038278649999999997 1 LEVO MPNGKKRKRHKMATHKRKKRLKKNRHKKKK Q7MV43 Small ribosomal subunit protein uS9 Porphyromonas gingivalis 0.014556106 1 LEVO MDYINAIGRRKAAVARVYLSEGSGKIVINKREIEQYFPSSILQYIVKQPLLKLDVAAKYDIKINLRGGGFKGQSEAARLA IARALVKINPDDKPALRSEGFITRDPRVVERKKPGRPKARKRFQFSKR B2RL63 Small ribosomal subunit protein bS18 Porphyromonas gingivalis 0.010644671 1 LEVO MAANNQGEIRYLTPLSVDTKKKKYCRFKKSGIRYIDYKDPEFLKKFLNEQGKILPRRITGTSLKFQRRVAQAVKRARHLA LLPYVTDMMK B2RIG4 MAGNESIUM ION 2.4305e-05 128 MG ZINC ION 6.5409e-05 1 ZN POTASSIUM ION 3.9098e-05 43 K SODIUM ION 2.299e-05 14 NA water 1.8015e-05 855 HOH singleParticle particle 7.5 Quantifoil R2/2 COPPER 300 CARBON CONTINUOUS ETHANE 100 277 FEI VITROBOT MARK IV TFS KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 0.5 1.5 FEI TITAN KRIOS AUTOGRID HOLDER NITROGEN GATAN K3 BIOQUANTUM (6k x 4k) 1.0 1 PHASE FLIPPING AND AMPLITUDE CORRECTION 3.0 FSC 0.143 CUT-OFF RELION 129576 MAXIMUM LIKELIHOOD MAXIMUM LIKELIHOOD