2025-07-02 REL PDBe PDBe PDBe 2024-12-23 2025-02-05 2025-02-05 2025-07-02 Netherlands Organisation for Scientific Research (NWO) Netherlands Dynamic microtubule plus end architecture in presence of EB3. Hoogebeen RA Saunders HAJ Howes SC Akhmanova A microtubule, plus end, protofilaments, CYTOSOLIC PROTEIN Saunders HAJ van den Berg CM Hoogebeen RA Schweizer D Stecker KE Roepman R Howes SC Akhmanova A A network of interacting ciliary tip proteins with opposing activities imparts slow and processive microtubule growth. Nat.Struct.Mol.Biol. US 32 979 994 2025 39856351 doi:10.1038/s41594-025-01483-y 1545-9985 Microtubules with sub-stoichiometric EB3 Microtubules with sub-stoichiometric EB3 0 Sus scrofa domesticus brain EB3 1 Homo sapiens tubulin 1 Sus scrofa domesticus brain tomography filament 6.8
MRB80 buffer = 80 mM piperazine-N, N[prime]-bis (2-ethane sulfonic acid), pH 6.8, supplemented with 4 mM MgCl2, and 1 mM EGTA.
 Quantifoil R2/1 COPPER 200 CARBON HOLEY GLOW DISCHARGE 0.039 ETHANE 90 303.15 FEI VITROBOT MARK IV
Prior to vitrification, the sample was manually back-blotted inside the Vitrobot chamber..
Cell Microscopy Core, Utrecht University Medical Center (UMC) 5 NO SECTIONING FEI TALOS ARCTICA FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 200 70.0 2.0 4.0 63000.0 NITROGEN GIF Bioquantum 20 GATAN K2 SUMMIT (4k x 4k) COUNTING 3710 3838 1.6 1 BACK PROJECTION 61 NONE emd_52359.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 300 600 300 0 0 0 300 600 300 1302.0 2604.0 1302.0 90.0 90.0 90.0 X Y Z -0.7034308 0.48484677 -0.0036923431 0.047559988 4.34 4.34 4.34 AUTHOR Extracted subtomogram of microtubule control (free) plus end (bin 2, cryoCARE denoised). emd_52359_additional_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 300 600 300 0 0 0 300 600 300 1302.0 2604.0 1302.0 90.0 90.0 90.0 X Y Z -1.2555239 1.1583186 0.0030295493 0.041171722 4.34 4.34 4.34 AUTHOR emd_52359_additional_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 300 600 300 0 0 0 300 600 300 1302.0 2604.0 1302.0 90.0 90.0 90.0 X Y Z -1.2318575 1.1611243 0.0045119566 0.043734368 4.34 4.34 4.34 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1302.0 2604.0 1302.0 90.0 90.0 90.0 X Y Z -1.4674871 1.182148 0.006543412 0.041607108 4.34 4.34 4.34 AUTHOR emd_52359_additional_8.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 300 600 300 0 0 0 300 600 300 1302.0 2604.0 1302.0 90.0 90.0 90.0 X Y Z -1.4301629 1.0345613 0.008609934 0.039997395 4.34 4.34 4.34 AUTHOR emd_52359_additional_9.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 300 600 300 0 0 0 300 600 300 1302.0 2604.0 1302.0 90.0 90.0 90.0 X Y Z -0.8804257 0.9005765 -0.003291981 0.051288906 4.34 4.34 4.34 AUTHOR emd_52359_additional_10.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 300 600 300 0 0 0 300 600 300 1302.0 2604.0 1302.0 90.0 90.0 90.0 X Y Z -0.69617367 0.54878014 -0.0015992578 0.051556055 4.34 4.34 4.34 AUTHOR emd_52359_additional_11.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 300 600 300 0 0 0 300 600 300 1302.0 2604.0 1302.0 90.0 90.0 90.0 X Y Z -0.7968488 0.7020922 -0.0042566517 0.057638865 4.34 4.34 4.34 AUTHOR 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1302.0 2604.0 1302.0 90.0 90.0 90.0 X Y Z -4.637066 4.0576115 -0.0035855435 0.061569158 4.34 4.34 4.34 AUTHOR emd_52359_additional_17.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 300 600 300 0 0 0 300 600 300 1302.0 2604.0 1302.0 90.0 90.0 90.0 X Y Z -5.0984917 2.1536791 -0.004501474 0.06932739 4.34 4.34 4.34 AUTHOR emd_52359_additional_18.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 300 600 300 0 0 0 300 600 300 1302.0 2604.0 1302.0 90.0 90.0 90.0 X Y Z -5.500347 4.866227 -0.0024394013 0.076573536 4.34 4.34 4.34 AUTHOR emd_52359_additional_19.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 300 600 300 0 0 0 300 600 300 1302.0 2604.0 1302.0 90.0 90.0 90.0 X Y Z -0.7963934 0.55000126 0.0020212682 0.050180648 4.34 4.34 4.34 AUTHOR emd_52359_additional_20.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 300 600 300 0 0 0 300 600 300 1302.0 2604.0 1302.0 90.0 90.0 90.0 X Y Z -5.342804 4.1792507 0.0005448492 0.056825604 4.34 4.34 4.34 AUTHOR 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2604.0 1302.0 90.0 90.0 90.0 X Y Z -1.6155033 1.409281 -0.0033031495 0.056282062 4.34 4.34 4.34 AUTHOR emd_52359_additional_26.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 1854 1918 600 0 0 0 1854 1918 600 8046.3604 8324.12 2604.0 90.0 90.0 90.0 X Y Z -4.535807 3.8463182 -0.003459858 0.040212754 4.34 4.34 4.34 AUTHOR Full tomogram from which main map was extracted as a subtomogram (bin2, cryoCARE denoised).