REL RCSB RCSB RCSB 2010-05-13 2010-12-08 2010-12-16 2014-07-23 Atomic model of an infectious rotavirus particle Settembre EC Chen JZ Dormitzer PR Grigorieff N Harrison SC Rotavirus, Triple Layered Particle, Near Atomic Resolution, VP4, VP7, Double layered particle, de novo, Infectious, Virus Settembre EC Chen JZ Dormitzer PR Grigorieff N Harrison SC Atomic model of an infectious rotavirus particle. EMBO J. 30 408 416 2011 21157433 doi:10.1038/emboj.2010.322 4v7q FULLOVERLAP Rotavirus Triple Layered Particle Rotavirus Triple Layered Particle
The sample was monodisperse
Full icosahedral Infectious Particle 1 100 100 Calculation of Protein Mass alone, no genome included. Rhesus Rotavirus (RRV)
The entire particle with genome was measured (the molecular weight is based on protein alone).
Rhesus Rotavirus (RRV) Homo sapiens VERTEBRATES 100 100 VP7 800 13 VIRION STRAIN false false Rotavirus singleParticle particle 1 7.5
10 mM Tris-HCL
200 mesh Carbon
 ETHANE 90 90 HOMEMADE PLUNGER
Vitrification instrument: manual plunger. in normal coldroom environment
front blotting for 3s before plunging FEI TECNAI F30 FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 2.0 1.2 3.0 59000.0 56772.0 GATAN LIQUID NITROGEN 90 90 90
Cut-plate film holders to reduce electron back-scattering
2008-03-01 KODAK SO-163 FILM ZEISS SCAI 7.0 110 20 800
4,187 particles in the dataset
1.2 8. Eucentric
The particles were selected with SIGNATURE.
individual particle
 OTHER 3.8 FSC 0.143 CUT-OFF frealign
icosahedral (I2)averaging
4187
full coverage
 10 emd_5199.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 500 500 500 0 0 0 500 500 500 615.0 615.0 615.0 90.0 90.0 90.0 X Y Z -0.32338911 0.48633468 -0.01312456 0.04130446 1.23 1.23 1.23 0.12 EMDB Infectious rotavirus particle. Center of the virus is at 0,0,0 and the map is a quadrant of the actual map.
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