2025-02-05 REL PDBe PDBe PDBe 2024-10-02 2025-02-05 2025-02-05 2025-02-05 Aligning Science Across Parkinsons (ASAP) ASAP-000282 United States In situ cryo-electron tomogram of a multi-lamellar vesicle in a NPC2-/- HeLa cell. #2 Kraus F He Y Swarup S Overmyer KA Jiang Y Brenner J Capitanio C Bieber A Jen A Nightingale NM Anderson BJ Lee C Paulo JA Smith IR Plitzko JM Gygi SP Schulman BA Wilfling F Coon JJ Harper JW Lysosomal storage disorders, autophagy, Multi-lamellar vesicle, cholesterol export, endocytosis, cargo delivery, LIPID TRANSPORT Kraus F He Y Swarup S Overmyer KA Jiang Y Brenner J Capitanio C Bieber A Jen A Nightingale NM Anderson BJ Lee C Paulo JA Smith IR Plitzko JM Gygi SP Schulman BA Wilfling F Coon JJ Harper JW Global cellular proteo-lipidomic profiling of diverse lysosomal storage disease mutants using nMOST. Sci Adv US 11 eadu5787 eadu5787 2025 39841834 doi:10.1126/sciadv.adu5787 2375-2548 EMD-51701 other EM volume
Tomogram of the same cell line and MLV structure
 HeLa TMEM192-3xHA NPC2-/- HeLa TMEM192-3xHA NPC2-/- 0
Modified with CRISPR/CAS9 with target sites determined using CHOPCHOP.
Homo sapiens tomography cell 7.0 Quantifoil R1/4 GOLD 200 HOLEY 10.0 GLOW DISCHARGE AIR ETHANE-PROPANE 70 298 FEI VITROBOT MARK IV
HeLa (TMEM192-HA) NPC2-/- cells were cultured on Poly-L-Lysine coated gold grids over night. The next day, cells were starved for 6h in EBSS. 10% glycerol was added shortly before plunging.
10% glycerol OTHER OTHER 30 3 120 80 1000 130
The value given for _em_focused_ion_beam.instrument is Thermo Fisher Arctis PFIB. This is not in a list of allowed values {'DB235', 'OTHER'} so OTHER is written into the XML file.
 TFS KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 3.5 5.5 42000.0 FEI TITAN KRIOS AUTOGRID HOLDER NITROGEN TFS Selectris X 10 FEI FALCON IV (4k x 4k) 4096 4096 2.0 1 BACK PROJECTION 1.3 Aretomo 34 emd_51702.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 1024 1024 131 0 0 17 1024 1024 131 12001.28 12001.28 1535.3201 90.0 90.0 90.0 X Y Z -382.636000000000024 247.746800000000007 1.4198321 10.422770999999999 11.72 11.72 11.72 AUTHOR