REL RCSB RCSB RCSB 2010-02-03 2010-02-23 2010-02-23 2011-09-23 3D reconstruction of a microtubule decorated with monomeric human kinesin (K349 construct) having AMPPNP bound in the nucleotide pocket. Sindelar CV Downing KH kinesin,microtubule,atpase,molecular motor,myosin,mechanism,motility,cytoskeleton Sindelar CV Downing KH An atomic-level mechanism for activation of the kinesin molecular motors. PROC.NAT.ACAD.SCI.USA 107 4111 4116 2010 20160108 doi:10.1073/pnas.0911208107 Microtubule decorated with monomeric human kinesin (K349 construct) having AMPPNP bound in the nucleotide pocket. Microtubule decorated with monomeric human kinesin (K349 construct) having AMPPNP bound in the nucleotide pocket. 2 K349 unidentified true Microtubule unidentified true helical filament 6.8
25mM Pipes, 25mM NaCl, 2mM MgCl2, 1mM EGTA
300 mesh copper grid with homemade holey carbon
 ETHANE HOMEMADE PLUNGER
Vitrification instrument: Homemade
 JEOL 4000EX FLOOD BEAM BRIGHT FIELD LAB6 400 4.1 0.7 1.6 60000.0 GATAN LIQUID NITROGEN 105 2008-01-21 KODAK SO-163 FILM NIKON SUPER COOLSCAN 9000 6.35 98 15 16. Eucentric OTHER 9.1 FSC 0.5 CUT-OFF SPIDER,FREALIGN
Approximately 190,000 asymmetric units were averaged in the final reconstruction.
done within FREALIGN
 emd_5166.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 35 35 35 49 -15 7 35 35 35 74.0845 74.0845 74.0845 90 90 90 X Y Z -0.0604785 0.171181 0.0121831 0.0332382 2.1167 2.1167 2.1167 0.051 AUTHOR 3D reconstruction of a microtubule decorated with monomeric human kinesin (K349 construct) with AMPPNP bound in the nucleotide pocket.
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 1mkj RIGID BODY FIT UCSF Chimera
Protocol: Rigid Body. Regions in the crystal structure whose structure were found to differ from the EM map were excluded from the fitting procedure. These regions corresponded to the switch loops, helices alpha 3 and alpha 4 (switch II helix), and the neck linker.
Cross correlation REAL
emd_5166.jpg