2025-02-12 REL PDBe PDBe PDBe 2024-07-29 2025-01-15 2025-01-15 2025-02-12 Agence Nationale de la Recherche (ANR) ANR-23-CE11-01 France Grenoble Alliance for Integrated Structural Cell Biology (GRAL) ANR-17-EURE-0003 France Grenoble Instruct-ERIC Center (ISBG) ANR-10-INSB-0005-02 France CryoEM structure of the antiparallel double-stranded influenza A RNP-like particle with a 18-mer RNA. Chenavier F Ruigrok RWH Schoehn G Ballandras-Colas A Crepin T Nucleoprotein, RNA, complex, RNP-like, influenza virus, VIRAL PROTEIN Chenavier F Zarkadas E Freslon LL Stelfox AJ Schoehn G Ruigrok RWH Ballandras-Colas A Crepin T Influenza a virus antiparallel helical nucleocapsid-like pseudo-atomic structure. Nucleic Acids Res. UK 53 2025 39673795 doi:10.1093/nar/gkae1211 1362-4962 0389 NARHAD EMD-51187 other EM volume
focused map on Strand 2 of the double stranded antiparallel helical assembly with 18mer RNA
 EMD-51189 other EM volume
focused map on Strand 1 of the double stranded antiparallel helical assembly with 18mer RNA
 EMD-51186 other EM volume
map of the double stranded parallel helical assembly with 14mer RNA
 EMD-51185 other EM volume
map of the double stranded parallel helical assembly with 12mer RNA
 EMD-51184 other EM volume
map of the single stranded helical assembly with 12mer RNA
 9gat FULLOVERLAP complex NP-RNA complex NP-RNA 0 1 2 Nucleoprotein 1 1 Influenza A virus RNA 1 2 synthetic construct Nucleoprotein Influenza A virus 0.05615039499999999 8 Escherichia coli BL21(DE3) LEVO HMTDGERQNATEIRASVGKMIDGIGRFYIQMCTELKLSDYEGRLIQNSLTIERMVLSAFDERRNKYLEEHPSAGKDPKKT GGPIYRRVDGKWRRELILYDKEEIRRIWRQANNGDDATAGLTHMMIWHSNLNDATYQRTRALVRTGMDPRMCSLMQGSTL PRRSGAAGAAVKGVGTMVMELIRMIKRGINDRNFWRGENGRRTRIAYERMCNILKGKFQTAAQRTMVDQVRESRNPGNAE FEDLIFLARSALILRGSVAHKSCLPACVYGSAVASGYDFEREGYSLVGIDPFRLLQNSQVYSLIRPNENPAHKSQLVWMA CHSAAFEDLRVSSFIRGTKVVPRGKLSTRGVQIASNENMETMESSTLELRSRYWAIRTRSGGNTNQQRASSGQISIQPTF SVQRNLPFDRPTIMAAFTGNTEGRTSDMRTEIIRLMESARPEDVSFQGRGVFELSDEKATSPIVPSFDMSNEGSYFFGDN AEEYDNLEHHHHHH Q1K9H2 RNA (5'-P(UC)9-FAM3') synthetic construct 0.00545717 8 UCUCUCUCUCUCUCUCUC 2-[3,6-bis(oxidanylidene)-4,5-dihydroxanthen-9-yl]-4-[3-[(2R)-2-oxidanylpropoxy]propylcarbamoyl]benzoic acid 0.000493505 6 A1IJK helical filament 0.23 7.5 20.0 HEPES 150.0 NaCl NaCl 5.0 beta-mercaptoethanol 2.0 methyl-PEG8-NHS 4.0 RNA (5'P-(UC)6-FAM3')
20 mM HEPES 150 mM NaCl 5 mM beta-mercaptoethanol 2 mM methyl-PEG8-NHS
 ETHANE 98 298 FEI VITROBOT MARK IV
5 seconds blot at force 0.
20 mM HEPES 150 mM NaCl 5 mM betamercaptoethanol Incubation overnight with 0.004 uM RNA. Prior freezing, the sample was incubated with 2 mM methyl PEG8 N hydroxysuccinimide ester reagent.
 TFS GLACIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 200 2.7 0.5 2.0 36000.0 NITROGEN GATAN K2 SUMMIT (4k x 4k) COUNTING 53.0 1 27.3 56.13 C1 3.2 FSC 0.143 CUT-OFF cryoSPARC 343311 NOT APPLICABLE emd_51188.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 400 400 400 0 0 0 400 400 400 458.0 458.0 458.0 90.0 90.0 90.0 X Y Z -0.39950907 0.9524025 0.0002655868 0.01957747 1.145 1.145 1.145 0.153 AUTHOR EM map of the influenza A RNP-like particle antiparallel double-stranded assembled with a 18-mer RNA. emd_51188_msk_1.map emd_51188_additional_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 400 400 400 0 0 0 400 400 400 458.0 458.0 458.0 90.0 90.0 90.0 X Y Z -0.515157 32.601134999999999 0.0061617396 0.40373737 1.145 1.145 1.145 AUTHOR sharpened EM map with EMready emd_51188_additional_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 400 400 400 0 0 0 400 400 400 458.0 458.0 458.0 90.0 90.0 90.0 X Y Z -1.5643474 2.4977734 0.00026558683 0.041075915 1.145 1.145 1.145 AUTHOR B-factor sharpened EM map emd_51188_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 400 400 400 0 0 0 400 400 400 458.0 458.0 458.0 90.0 90.0 90.0 X Y Z -0.61455065 1.1806033 0.00055561453 0.0667845 1.145 1.145 1.145 AUTHOR half-map 1 emd_51188_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 400 400 400 0 0 0 400 400 400 458.0 458.0 458.0 90.0 90.0 90.0 X Y Z -0.6795323 1.2810098 0.00055943266 0.06696187 1.145 1.145 1.145 AUTHOR half-map 2