2025-10-22 REL PDBe INITIAL_RELEASE REPOSITORY STRUCTURE_SUMMARY citation em_admin pdbx_entry_details _citation.country _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.pdbx_database_id_DOI _citation.year _em_admin.last_update DATABASE_REFERENCES citation citation_author em_admin _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_volume _citation.page_first _citation.page_last _citation.pdbx_database_id_PubMed _citation.title _em_admin.last_update DATABASE_REFERENCES citation citation_author em_admin _citation.page_first _citation.page_last _citation_author.identifier_ORCID _em_admin.last_update PDBe PDBe 2024-05-15 2024-05-29 2024-05-29 2025-10-22 German Research Foundation (DFG) Germany P116 (amino acids 246-818) dimer in the full state Mager S Lipid Transfer Protein, Mycoplasma pneumoniae, LIPID BINDING PROTEIN Manger S Arghittu SM Sprankel L Meier-Credo J Wieland K Bublak D Langer J Covino R Frangakis AS How does Mycoplasma pneumoniae scavenge lipids from its host membranes? Sci Adv US 11 eady4746 eady4746 2025 41032592 doi:10.1126/sciadv.ady4746 2375-2548 Sprankel L Vizarraga D Martin J Manger S Meier-Credo J Marcos M Julve J Rotllan N Scheffer MP Escola-Gil JC Langer JD Pinol J Fita I Frangakis AS Essential protein P116 extracts cholesterol and other indispensable lipids for Mycoplasmas. Nat Struct Mol Biol US 30 321 329 2023 36782049 doi:10.1093/nar/gky1106 1545-9985 EMD-18478 other EM volume
P116; aa 246-818; empty; monomer
 9fch FULLOVERLAP PDB 8a9a unspecified
P116; aa 60-868; full; dimer
 PDB 8a9b unspecified
P116; aa 60-868; empty; monomer
 EMDB EMD-18478 other EM volume
P116; aa 246-818; empty; monomer
 EMDB EMD-50314 associated EM volume
P116 dimer in the full state (PDB structure of the full-length ectodomain truncated to amino acids 246-818)
 P116 from Mycoplasma pneumoniae (aa 246-818; full state) P116 from Mycoplasma pneumoniae (aa 246-818; full state) 0 1 Mycoplasmoides pneumoniae M129 Uncharacterized protein MG075 homolog Mycoplasmoides pneumoniae M129 0.06438674999999999 2 Escherichia coli LEVO GVDVFEAQKNLVGKGKYLNTHVKAEDVKKDVNANIKNQFDIAKIIAELMGKALKEFGNQQEGQPLSFLKVMDKVKEDFEK LFNLVRPGLGKFVKDLIQSSSQAENKITVYKLIFDNKKTILNLLKELSIPELNSSLGLVDVLFDGITDSDGLYERLQSFK DLIVPAVKTNEKTAALSPLIEELLTQKDTYVFDLIQKHKGILTNLLKNFLADFQKSTPFMADQVAIFTELFDNEGAFDLF GEADFVDKIAELFLTKRTVKNGEKIETKDSLLVTSLKSLLGEKVAALGDLLDSYIFKNELLNRSVEVAKAEAKDTKGATD YKKEQAKALKKLFKHIGENTLSKTNLDKITLKEVKNTENVELEETETTLKVKKLDVEYKVELGNFEIKNGLIKAMLEFLP DTKDLETTLDKLLFKGESYKAMKDKYIKEGFPGYGWAKGVVPGAFESIENTFKSAIDKTKSIRDLFGDMLFGNDLSSVKE TDSFITLGGSFDIKYGGENLNVLPAYYSLINSEIGYQIIGVDTTIDATKVKVELKNKEYKGKSPAINGQVKLSQSFFNVW TNMFDSITKQIFQ P75556 singleParticle particle 3 7.4
20 mM Tris-HCl
 C-flat-1.2/1.3 ETHANE 100 4 FEI VITROBOT MARK IV FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 70.0 2.7 0.8 3.5 GATAN K3 BIOQUANTUM (6k x 4k) 50.0 1 PHASE FLIPPING AND AMPLITUDE CORRECTION 6.52 FSC 0.143 CUT-OFF 145945 MAXIMUM LIKELIHOOD MAXIMUM LIKELIHOOD emd_50314.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 256 256 256 0 0 0 256 256 256 419.328 419.328 419.328 90.0 90.0 90.0 X Y Z -0.16132881 0.77959734 0.00004181397 0.016118696 1.638 1.638 1.638 0.226 AUTHOR emd_50314_msk_1.map emd_50314_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 256 256 256 0 0 0 256 256 256 419.328 419.328 419.328 90.0 90.0 90.0 X Y Z -0.29076827 0.8652368 0.00028355684 0.023807038 1.638 1.638 1.638 AUTHOR emd_50314_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 256 256 256 0 0 0 256 256 256 419.328 419.328 419.328 90.0 90.0 90.0 X Y Z -0.21968792 0.885408 0.00027882066 0.023814064 1.638 1.638 1.638 AUTHOR