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    <admin>
        <current_status>
            <date>2024-06-26</date>
            <code>REL</code>
            <processing_site>PDBe</processing_site>
        </current_status>
        <sites>
            <deposition>PDBe</deposition>
            <last_processing>PDBe</last_processing>
        </sites>
        <key_dates>
            <deposition>2024-04-16</deposition>
            <header_release>2024-06-19</header_release>
            <map_release>2024-06-19</map_release>
            <update>2024-06-26</update>
        </key_dates>
        <grant_support>
            <grant_reference>
                <funding_body>Vienna Science and Technology Fund (WWTF)</funding_body>
                <code>LS19-001</code>
                <country>Austria</country>
            </grant_reference>
            <grant_reference>
                <funding_body>Austrian Science Fund</funding_body>
                <code>P 36743-B</code>
                <country>Austria</country>
            </grant_reference>
        </grant_support>
        <title>Electron tomogram of ER-nuclear envelope junction of HeLa cell in early telophase</title>
        <authors_list>
            <author ORCID="0000-0003-3486-2285">Bragulat-Teixidor H</author>
            <author ORCID="0000-0003-3976-0843">Otsuka S</author>
        </authors_list>
        <keywords>Endoplasmic reticulum, Nuclear envelope, Organelle contact site, Membrane junction, CELL CYCLE</keywords>
    </admin>
    <crossreferences>
        <citation_list>
            <primary_citation>
                <journal_citation published="true">
                    <author ORCID="0000-0003-3486-2285" order="1">Bragulat-Teixidor H</author>
                    <author ORCID="0000-0002-8481-8680" order="2">Ishihara K</author>
                    <author ORCID="0000-0003-4842-2862" order="3">Szucs GM</author>
                    <author ORCID="0000-0003-3976-0843" order="4">Otsuka S</author>
                    <title>The endoplasmic reticulum connects to the nucleus by constricted junctions that mature after mitosis.</title>
                    <journal_abbreviation>Embo Rep.</journal_abbreviation>
                    <country>UK</country>
                    <year>2024</year>
                    <external_references type="PUBMED">38877171</external_references>
                    <external_references type="DOI">doi:10.1038/s44319-024-00175-w</external_references>
                    <external_references type="ISSN">1469-3178</external_references>
                </journal_citation>
            </primary_citation>
        </citation_list>
    </crossreferences>
    <sample>
        <name>HeLa Kyoto cell</name>
        <supramolecule_list>
            <cell_supramolecule supramolecule_id="1">
                <name>HeLa Kyoto cell</name>
                <parent>0</parent>
                <natural_source database="NCBI">
                    <organism ncbi="9606">Homo sapiens</organism>
                    <strain>HeLa</strain>
                </natural_source>
            </cell_supramolecule>
        </supramolecule_list>
    </sample>
    <structure_determination_list>
        <structure_determination structure_determination_id="1">
            <method>tomography</method>
            <aggregation_state>cell</aggregation_state>
            <specimen_preparation_list>
                <tomography_preparation preparation_id="1">
                    <buffer>
                        <ph>7.4</ph>
                        <details>DMEM without Riboflavin and Phenol Red, containing 10% FBS, 1% Pen/Strep, and 50 nM SiR-DNA</details>
                    </buffer>
                    <staining>
                        <type>NEGATIVE</type>
                        <material>Uranyl acetate and lead citrate</material>
                    </staining>
                    <sugar_embedding>
                        <material>Agar 100 Epoxy resin</material>
                        <details>Frozen cells were substituted in 0.1% uranyl acetate (UA), 2% Osmium tetroxide and 5% H2O in acetone following this temperature ramp: -90 C to -80 C for 10 hours, -80 C to -30 C for 10 hours, -30 C for 4 hours, -30 C to 0 C for 6 ours, 0 C to 20 C for 4 hours, 20 C for 5-6 hours.</details>
                    </sugar_embedding>
                    <vitrification>
                        <cryogen_name>NITROGEN</cryogen_name>
                    </vitrification>
                    <fiducial_markers_list>
                        <fiducial_marker>
                            <manufacturer>Cytodiagnostics</manufacturer>
                            <diameter units="nanometer">15</diameter>
                        </fiducial_marker>
                    </fiducial_markers_list>
                    <high_pressure_freezing>
                        <instrument>OTHER</instrument>
                        <details>High pressure freezing chamber was 1 mm thick, 6.0 mm diameter, with central cavities 5.0 mm x 5.0 mm x 25 um deep. The chamber had been in contact with 1-hexadecene.. The value given for _em_high_pressure_freezing.instrument is Leica EM ICE. This is not in a list of allowed values {'LEICA EM PACT', 'LEICA EM PACT2', 'BAL-TEC HPM 010', 'OTHER', 'LEICA EM HPM100', 'EMS-002 RAPID IMMERSION FREEZER'} so OTHER is written into the XML file.</details>
                    </high_pressure_freezing>
                    <cryo_protectant>20% Ficoll-PM400</cryo_protectant>
                    <sectioning>
                        <ultramicrotomy>
                            <instrument>Leica Ultracut UCT</instrument>
                            <temperature units="K">298</temperature>
                            <final_thickness>250</final_thickness>
                        </ultramicrotomy>
                    </sectioning>
                </tomography_preparation>
            </specimen_preparation_list>
            <microscopy_list>
                <tomography_microscopy microscopy_id="1">
                    <microscope>FEI TECNAI F20</microscope>
                    <illumination_mode>FLOOD BEAM</illumination_mode>
                    <imaging_mode>BRIGHT FIELD</imaging_mode>
                    <electron_source>FIELD EMISSION GUN</electron_source>
                    <acceleration_voltage units="kV">200</acceleration_voltage>
                    <nominal_defocus_min units="µm">0.2</nominal_defocus_min>
                    <nominal_defocus_max units="µm">0.5</nominal_defocus_max>
                    <image_recording_list>
                        <image_recording image_recording_id="1">
                            <film_or_detector_model>FEI EAGLE (4k x 4k)</film_or_detector_model>
                            <average_electron_dose_per_image units="e/Å^2">60.0</average_electron_dose_per_image>
                        </image_recording>
                    </image_recording_list>
                </tomography_microscopy>
            </microscopy_list>
            <tomography_processing image_processing_id="1">
                <image_recording_id>1</image_recording_id>
                <final_reconstruction>
                    <algorithm>BACK PROJECTION</algorithm>
                    <number_images_used>110</number_images_used>
                </final_reconstruction>
            </tomography_processing>
        </structure_determination>
    </structure_determination_list>
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        <file>emd_50110.map.gz</file>
        <symmetry>
            <space_group>1</space_group>
        </symmetry>
        <data_type>IMAGE STORED AS SIGNED INTEGER (2 BYTES)</data_type>
        <dimensions>
            <col>4096</col>
            <row>4096</row>
            <sec>660</sec>
        </dimensions>
        <origin>
            <col>0</col>
            <row>0</row>
            <sec>-310</sec>
        </origin>
        <spacing>
            <x>4096</x>
            <y>4096</y>
            <z>660</z>
        </spacing>
        <cell>
            <a units="Å">18472.96</a>
            <b units="Å">18472.96</b>
            <c units="Å">2976.6</c>
            <alpha units="deg">90.0</alpha>
            <beta units="deg">90.0</beta>
            <gamma units="deg">90.0</gamma>
        </cell>
        <axis_order>
            <fast>X</fast>
            <medium>Y</medium>
            <slow>Z</slow>
        </axis_order>
        <statistics>
            <minimum>-1808.0</minimum>
            <maximum>1291.0</maximum>
            <average>211.203519999999997</average>
            <std>152.433690000000013</std>
        </statistics>
        <pixel_spacing>
            <x units="Å">4.51</x>
            <y units="Å">4.51</y>
            <z units="Å">4.51</z>
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            <contour primary="true">
                <source>AUTHOR</source>
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