<?xml version="1.0" encoding="UTF-8"?>
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    <admin>
        <current_status>
            <date>2019-11-27</date>
            <code>REL</code>
            <processing_site>PDBe</processing_site>
        </current_status>
        <sites>
            <deposition>PDBe</deposition>
            <last_processing>PDBe</last_processing>
        </sites>
        <key_dates>
            <deposition>2019-05-10</deposition>
            <header_release>2019-10-16</header_release>
            <map_release>2019-10-16</map_release>
            <update>2019-11-27</update>
        </key_dates>
        <grant_support>
            <grant_reference>
                <funding_body>Medical Research Council (United Kingdom)</funding_body>
                <code>MC_UP_1201/6</code>
                <country>United Kingdom</country>
            </grant_reference>
            <grant_reference>
                <funding_body>European Commission</funding_body>
                <code>INFRAIA project Epic-XS (Project 823839)</code>
            </grant_reference>
            <grant_reference>
                <funding_body>Cancer Research UK</funding_body>
                <code>C576/A14109</code>
                <country>United Kingdom</country>
            </grant_reference>
        </grant_support>
        <title>Structure of inner kinetochore CCAN complex</title>
        <authors_list>
            <author>Yan K</author>
            <author>Yang J</author>
            <author>Zhang Z</author>
            <author>McLaughlin SH</author>
            <author>Chang L</author>
            <author>Fasci D</author>
            <author>Heck AJR</author>
            <author>Barford D</author>
        </authors_list>
    </admin>
    <crossreferences>
        <citation_list>
            <primary_citation>
                <journal_citation published="true">
                    <author order="1">Yan K</author>
                    <author order="2">Yang J</author>
                    <author order="3">Zhang Z</author>
                    <author order="4">McLaughlin SH</author>
                    <author order="5">Chang L</author>
                    <author order="6">Fasci D</author>
                    <author order="7">Ehrenhofer-Murray AE</author>
                    <author order="8">Heck AJR</author>
                    <author order="9">Barford D</author>
                    <title>Structure of the inner kinetochore CCAN complex assembled onto a centromeric nucleosome.</title>
                    <journal_abbreviation>Nature</journal_abbreviation>
                    <country>UK</country>
                    <volume>574</volume>
                    <first_page>278</first_page>
                    <last_page>282</last_page>
                    <year>2019</year>
                    <external_references type="PUBMED">31578520</external_references>
                    <external_references type="DOI">doi:10.1038/s41586-019-1609-1</external_references>
                    <external_references type="ISSN">1476-4687</external_references>
                    <external_references type="CSD">0006</external_references>
                    <external_references type="ASTM">NATUAS</external_references>
                </journal_citation>
            </primary_citation>
        </citation_list>
        <emdb_list>
            <emdb_reference>
                <emdb_id>EMD-4971</emdb_id>
                <relationship>
                    <other>associated EM volume</other>
                </relationship>
            </emdb_reference>
        </emdb_list>
    </crossreferences>
    <sample>
        <name>Inner kinetochore CCAN complex</name>
        <supramolecule_list>
            <complex_supramolecule supramolecule_id="1">
                <name>Inner kinetochore CCAN complex</name>
                <parent>0</parent>
                <macromolecule_list>
                    <macromolecule>
                        <macromolecule_id>1</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>2</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>3</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>4</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>5</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>6</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>7</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>8</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>9</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>10</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>11</macromolecule_id>
                    </macromolecule>
                </macromolecule_list>
                <natural_source database="NCBI">
                    <organism ncbi="4932">Saccharomyces cerevisiae</organism>
                </natural_source>
                <recombinant_expression database="NCBI">
                    <recombinant_organism ncbi="10469">unidentified baculovirus</recombinant_organism>
                    <recombinant_cell>High Five</recombinant_cell>
                </recombinant_expression>
            </complex_supramolecule>
        </supramolecule_list>
    </sample>
    <structure_determination_list>
        <structure_determination structure_determination_id="1">
            <method>singleParticle</method>
            <aggregation_state>particle</aggregation_state>
            <specimen_preparation_list>
                <single_particle_preparation preparation_id="1">
                    <buffer>
                        <ph>8</ph>
                    </buffer>
                    <vitrification>
                        <cryogen_name>ETHANE</cryogen_name>
                        <details></details>
                    </vitrification>
                </single_particle_preparation>
            </specimen_preparation_list>
            <microscopy_list>
                <single_particle_microscopy microscopy_id="1">
                    <microscope>FEI TITAN KRIOS</microscope>
                    <illumination_mode>FLOOD BEAM</illumination_mode>
                    <imaging_mode>BRIGHT FIELD</imaging_mode>
                    <electron_source>FIELD EMISSION GUN</electron_source>
                    <acceleration_voltage units="kV">300</acceleration_voltage>
                    <image_recording_list>
                        <image_recording image_recording_id="1">
                            <film_or_detector_model>FEI FALCON III (4k x 4k)</film_or_detector_model>
                            <detector_mode>COUNTING</detector_mode>
                            <average_electron_dose_per_image units="e/Å^2">32.0</average_electron_dose_per_image>
                        </image_recording>
                    </image_recording_list>
                </single_particle_microscopy>
            </microscopy_list>
            <singleparticle_processing image_processing_id="1">
                <image_recording_id>1</image_recording_id>
                <startup_model type_of_model="NONE">
                    <details>Reconstruction using SIMPLE_prime</details>
                </startup_model>
                <final_reconstruction>
                    <resolution units="Å" res_type="BY AUTHOR">3.8</resolution>
                    <resolution_method>FSC 0.143 CUT-OFF</resolution_method>
                    <number_images_used>618459</number_images_used>
                </final_reconstruction>
                <initial_angle_assignment>
                    <type>MAXIMUM LIKELIHOOD</type>
                </initial_angle_assignment>
                <final_angle_assignment>
                    <type>MAXIMUM LIKELIHOOD</type>
                </final_angle_assignment>
            </singleparticle_processing>
        </structure_determination>
    </structure_determination_list>
    <map format="CCP4" size_kbytes="131073">
        <file>emd_4971.map.gz</file>
        <symmetry>
            <space_group>1</space_group>
        </symmetry>
        <data_type>IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)</data_type>
        <dimensions>
            <col>320</col>
            <row>320</row>
            <sec>320</sec>
        </dimensions>
        <origin>
            <col>0</col>
            <row>0</row>
            <sec>0</sec>
        </origin>
        <spacing>
            <x>320</x>
            <y>320</y>
            <z>320</z>
        </spacing>
        <cell>
            <a units="Å">348.80002</a>
            <b units="Å">348.80002</b>
            <c units="Å">348.80002</c>
            <alpha units="deg">90.0</alpha>
            <beta units="deg">90.0</beta>
            <gamma units="deg">90.0</gamma>
        </cell>
        <axis_order>
            <fast>X</fast>
            <medium>Y</medium>
            <slow>Z</slow>
        </axis_order>
        <statistics>
            <minimum>-0.07099126</minimum>
            <maximum>0.13693564</maximum>
            <average>0.0000904514</average>
            <std>0.0020800189</std>
        </statistics>
        <pixel_spacing>
            <x units="Å">1.09</x>
            <y units="Å">1.09</y>
            <z units="Å">1.09</z>
        </pixel_spacing>
        <contour_list>
            <contour primary="true">
                <level>0.017</level>
                <source>AUTHOR</source>
            </contour>
        </contour_list>
        <label>::::EMDATABANK.org::::EMD-4971::::</label>
        <annotation_details>The map of CCAN complex with mask3.</annotation_details>
    </map>
</emd>
