2025-11-19 REL RCSB INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY RCSB RCSB 2025-02-18 2025-11-19 2025-11-19 2025-11-19 Ministry of Agriculture, Forestry and Fisheries (MAFF) GD0696J004 Japan Japan Society for the Promotion of Science (JSPS) 21K20645 Japan Composite baseplate asymmetric unit of JohannRWettstein (Bas63) Hodgkinson-Bean J baseplate, wedge, hub, puncture apparatus, sheath initiator, tube initiator, tape measure protein, LTF-platform, spacer, phage, bacteriophage, VIRAL PROTEIN Hodgkinson-Bean J Ayala R McJarrow-Keller K Cassin L Rutter GL Crowe AJM Wolf M Bostina M Icosahedral capsid assembly of phage JohannRWettstein (Bas63) To Be Published 0353 EMD-48573 focused EM volume
C6 focused connecter map
 EMD-48572 focused EM volume
C12 focused connecter map
 EMD-48599 other EM volume
merged connecter map
 EMD-48600 consensus EM volume
Helical tail map
 EMD-49251 consensus EM volume
Capsid map
 EMD-49262 consensus EM volume
C3 baseplate consensus reconstruction of JohannRWettstein (Bas63)
 EMD-49263 consensus EM volume
C6 baseplate consensus reconstruction of JohannRWettstein (Bas63)
 EMD-49264 focused EM volume
C3 baseplate puncture appratus focussed reconstruction of JohannRWettstein (Bas63)
 EMD-49265 focused EM volume
C3 baseplate wedge focussed reconstruction of JohannRWettstein (Bas63)
 EMD-49270 focused EM volume
C3 baseplate/tail contiguous subunit 2 of JohannRWettstein (Bas63)
 EMD-49271 focused EM volume
C3 baseplate/tail contiguous subunit 3 of JohannRWettstein (Bas63)
 9ndy FULLOVERLAP EMDB EMD-48573 focused EM volume
C6 focused connecter map
 EMDB EMD-48572 focused EM volume
C12 focused connecter map
 EMDB EMD-48599 other EM volume
merged connecter map
 EMDB EMD-48600 consensus EM volume
Helical tail map
 EMDB EMD-49251 consensus EM volume
Capsid map
 EMDB EMD-49262 consensus EM volume
C3 baseplate consensus reconstruction of JohannRWettstein (Bas63)
 EMDB EMD-49263 consensus EM volume
C6 baseplate consensus reconstruction of JohannRWettstein (Bas63)
 EMDB EMD-49264 focused EM volume
C3 baseplate puncture appratus focussed reconstruction of JohannRWettstein (Bas63)
 EMDB EMD-49265 focused EM volume
C3 baseplate wedge focussed reconstruction of JohannRWettstein (Bas63)
 EMDB EMD-49270 focused EM volume
C3 baseplate/tail contiguous subunit 2 of JohannRWettstein (Bas63)
 EMDB EMD-49271 focused EM volume
C3 baseplate/tail contiguous subunit 3 of JohannRWettstein (Bas63)
 EMDB EMD-49281 associated EM volume
Composite baseplate asymmetric unit of JohannRWettstein (Bas63)
 PDB 9MT4 unspecified
merged connecter model
 PDB 9MT5 unspecified
Helical tail model
 PDB 9NCF unspecified
Capsid model
 Escherichia phage JohannRWettstein Escherichia phage JohannRWettstein 0 3 9 8 4 6 Escherichia phage JohannRWettstein VIRION SPECIES false false Tube initiator protein (gp018) Escherichia phage JohannRWettstein 0.028593939 2 LEVO MLWDSNMQIKYSGKDGIYFHLRDNVDAFLTLSATENMEFDSPMQVTTQNMQSGQTVTDNVQRAPRTITISGVVVVGYEGS LLLTRQGQLVENFIDTLESWRDQKQIISVICKDGIKIDDSIITSFKASKDVGISNGLRVQLTFQEINFKAIVGQTDVSAA TGKTATTNDGGATSKKNTGNTTTSLGNGKLNCQLLFDLDANGVRELTSAEDNALAKCSMSAKTRKGVTTFSDEAERNAGA ALNSTAGNGKALQKHSVNPNKKGTY A0AAE7VVH7 Sheath initiator (gp022) Escherichia phage JohannRWettstein 0.015632561 2 LEVO MKTDFALNLGGDYVATLGSDSVYVAHGDLKITGNQIRIIPEDDKATQVAQRLHIRCLLRSGEVFFNTSAGFPYLQLAKFK QKTSIFDNYMKAYLVETRDVSNIYNYSSSMDNAQRKVTVNFDATTTTDILTDITQEVNI A0AAE8B0J9 Hub protein (gp020) Escherichia phage JohannRWettstein 0.037204171999999994 1 LEVO MSVKDSTAGASFRCYQLAVGSETTAFNDKPTSHAKDSMQMDYFDNLQFTCNVSYTSQKNKVTSDDTTFEIYNLNKEMRAK FKTVGATVMLRAGYTTGFKRDANGDLIIEYDNLPLIYLGTIEYAYTYKRGVDMITKVICSNDKMERTTIKTSISYKAGTT RKNVIRDLVNRLGFSLIDEDLSSIDGYTYKNGFSVWGSVAEALTKVCEESSLRWYTFNKQIRVVPFNAKARQLSWEIYPY NVIDSLQGYYRRTRKVLKKENKTVIKVKTGVRCKIHLDGRIKMGDNVTIRESEDFEGQYRVKGLSHNLDFTGGAWTTELD LEKVE A0AAE7VWE1 Tape measure protein (gp017) Escherichia phage JohannRWettstein 0.08034058599999999 1 LEVO MAQYTVDSFIVELGFSEKVVKGLQRVEKMSMQAAQRIERNINKAFDVKPNKSSQEALNRIVKNAQSASGRINKALNSSLN LDSQGVKSLKKLETQAKKTAKGINKSLRDAMKVDGKITIKTGRGRGGQSIPPVGGGAPRGPRVDVAQRQMERMFNNNFYS GLTRRLETIGGQGNQMAASFRGSLQGIYNKYKGTGKVGEYEMEVKKLIDVTKRWVIAENARLKSVKEAAWLQDRANSSLR QLVGGFVSAYALLELSQKTIEAGVKRQSAQLASTAIFGADTQQARMFAASFAHQIGQNYTDTMKQYSNFAAGAQPTLGFQ GTQEFYKNAAMFARIRGATDEDLKGIMVAFQQMASKGKVQAEELRGQLGDRLAGAVQLFADAIGKTPQELDKMMQDGKLL AQDVLPKVSERMAELVKQAGGMNAVSKQTATSMGQAKAMWDNTLVALFNNSSEGISQLSNSVAMFLQGSLGSTQALGVVI GNLLKGASNLLDFVTDFMYRTSALYYYARAWYKDLDNSQQKLIKSAGEFLGTVVTIGGVVAVVSKAVKLLSGLVGGGIFG KILQRLGVSAAGTAAAGEAAAAAGGVTATRMALGTVGSALMLRGSTDPNAAKNYSEVTLPKPFENAVANITNPKRPMFFD ENGQLQFAQYTQDVEGNRKLIDNGLSNWEIIMDKLSTSIDNFANKFNQTPMMMTPSGLPMQTKQTLNVTFNLDGKQIATK MVDITDKNQEDILLSSSYPEEE A0AAE7VV46 Puncture apparatus (gp021) Escherichia phage JohannRWettstein 0.023186848 1 LEVO MKSPVTRMSGYVSECLDEFRKELYTGLPAIIQSFDSKTQTATVKPLYSINGLPMPEITGVPVQFPSGGGASLTFPVKTND RCWLAFSMLPLDDFVVNDKNTQMETNMRRTHDISDCVAFVGICTRTQNFKPDPTAVRLHFGDSVLRVTDDGNFYFEGDVH ISKNLYVKEEVHGSDFISDTTGVSFNEHTHHYYWTDPAGEADTTEAQ A0AAE8B143 Wedge protein 2 (gp023) Escherichia phage JohannRWettstein 0.053139953 4 LEVO MAGLTTTGLQTLRYQEIFDNIKSRLLRDISPNLDVSEDSQLGLFLASIARSLADTHEVLSEIYDGGTIDKAEGFNLDDIT ALNAVYRYVAQATRGQVEFTGTTGATIPSTTRLRSTAGNIFYPVSGITLTPSYCVEAVLEVNSLRTDANYVIIIDNVIFS YQPKSSDTITVLLTELADAINGGIVAKAEVINDGSALRVYKDEGDIIARTNPMVVTATTFLTFTKITTIHDVVAEEVGAI PALAGTLIEIETTVDGLDSVYNRYDLTTGRNEETDTELRQRYLESLAVTGVGTLDAIVAAVKRVQGVSDASGVENDTEET SSEGLPPKSFKIVVVGGQNDNVAQAIWDTKPAGIRAYGAIFGTAYDLGNLAHNVYFSRPTPKYAFVKVSYSLYDEESLTI PEEDIRDSIVQGINAYGRTLKVGNDVIPNRIYGYIYDVIKGVEINEIKVALSNNQSVPPSDGQYTTARITVDGDQYTVWE SSQYTIAKE A0AAE8B2A9 Wedge protein 1 (gp024) Escherichia phage JohannRWettstein 0.031622605 2 LEVO MFQKIDNVYYKTLDERTVTQFKDKFIYTSLLKAVTDELQTLEDVSWQMHTERNIRKAVGQQLDNIGSLIKVPRPLGADDE TYRAMLYIQIFLRRSDTTPTFLQNAIMTLYNATFSQIFEHITPMTAGIVVRVNTRNNVIDTAYTLAKIAATTIGSAVILR DVTLNGTAWTPVEVADSALAIVDDKDNWFVTDANKGLVTNNTGGSLEKNLLGSLADAGVRDAYFKVDRTANSGSVDYLKV NKNYNATDNYIVGKETVAGGDYGVMAEVAQIIKGRKDKSQQEGSS A0AAE8B2H1 Spacer protein (gp019) Escherichia phage JohannRWettstein 0.013209922 2 LEVO MSQYIPVPDTEWSTQTVTLDGTVFVIELKYKERLDRWFLTLSDVDGNVLLSEKKCLADQSITGRYVIPSLAGELFVERMY GTDLQPTRNNFGREKAFELNYYTQEDMRLMENL A0AAE7VUR9 LTF platform protein (gp025) Escherichia phage JohannRWettstein 0.011093397999999999 6 LEVO MAFLNWSTDEVDADGNQLKVLPPPEIQATGLLRGEPMGRQWFNYILNYLLKKANGTVGEVRSFATEQPDLVANGWNLIKT ETGTASTSTKNLYTYEFVGA A0AAE8B758 singleParticle particle 7.4 ETHANE-PROPANE TFS KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 1.0 4.0 FEI FALCON III (4k x 4k) 49.6 1 PHASE FLIPPING AND AMPLITUDE CORRECTION 3.83 FSC 0.143 CUT-OFF cryoSPARC
The final reconstruction is a composite reconstruction of maps under accessions:EMD-49262, EMD-49264 and EMD-49265. Particle number and resolution are reported from the consensus reconstruction used (EMD-49262).
14390 MAXIMUM LIKELIHOOD MAXIMUM LIKELIHOOD emd_49281.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 400 400 400 0 0 0 400 400 400 554.8 554.8 554.8 90.0 90.0 90.0 Z Y X -8.973017 31.048459999999999 0.01499121 1.0438957 1.387 1.387 1.387 4.78 AUTHOR The final reconstruction is a composite reconstruction of maps under accessions:EMD-49262, EMD-49264 and EMD-49265. Particle number and resolution are reported from the consensus reconstruction used (