2025-05-28 REL RCSB INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY DATA_COLLECTION em_admin em_software _em_admin.last_update _em_software.name EXPERIMENTAL_SUMMARY em_admin em_software _em_admin.last_update _em_software.name RCSB RCSB 2024-09-24 2024-12-11 2024-12-11 2025-05-28 National Institutes of Health/National Institute of Diabetes and Digestive and Kidney Disease (NIH/NIDDK) R01DA055656 United States National Institutes of Health/National Institute of Diabetes and Digestive and Kidney Disease (NIH/NIDDK) U24DK116195 United States CryoEM structure of Gq-coupled MRGPRD with a new agonist EP-2825 Cao C Wang C Liu Y Fay JF Roth BL GPCR, SIGNALING PROTEIN Wang C Liu Y Lanier M Yeager A Singh I Gumpper RH Krumm BE DeLeon C Zhang S Boehm M Pittner R Baron A Dvorak L Bacon C Shoichet BK Martinborough E Fay JF Cao C Roth BL High-affinity agonists reveal recognition motifs for the MRGPRD GPCR. Cell Rep US 43 114942 114942 2024 39580805 doi:10.1016/j.celrep.2024.114942 2211-1247 9dqh FULLOVERLAP EP-2825-bound MRGPRD-Gq complex EP-2825-bound MRGPRD-Gq complex 0 1 2 3 4 5 0.137 Mas-related G-protein coupled receptor member D Homo sapiens 0.036171523 1 Spodoptera frugiperda LEVO GPNQTLNSSGTVESALNYSRGSTVHTAYLVLSSLAMFTCLCGMAGNSMVIWLLGFRMHRNPFCIYILNLAAADLLFLFSM ASTLSLETQPLVNTTDKVHELMKRLMYFAYTVGLSLLTAISTQRCLSVLFPIWFKCHRPRHLSAWVCGLLWTLCLLMNGL TSSFCSKFLKFNEDRCFRVDMVQAALIMGVLTPVMTLSSLTLFVWVRRSSQQWRRQPTRLFVVVLASVLVFLICSLPLSI YWFVLYWLSLPPEMQVLCFSLSRLSSSVSSSANPVIYFLVGSRRSHRLPTRSLGTVLQQALREEPELEGGETPTVGTNEM GA Q8TDS7 Gs-mini-Gq chimera Homo sapiens 0.028084831999999997 1 Spodoptera frugiperda LEVO MGSTVSAEDKAAAERSKMIDKNLREDGEKARRTLRLLLLGADNSGKSTIVKQMRILHGGSGGSGGTSGIFETKFQVDKVN FHMFDVGGQRDERRKWIQCFNDVTAIIFVVDSSDYNRLQEALNDFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKI EDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRKEFVDISTASGDGRHICYPHFTCAVDTENARRIFNDCKDIILQMNL REYNLV Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 Homo sapiens 0.037728152 1 Spodoptera frugiperda LEVO GPGSSGSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQ DGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFF PNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRV SCLGVTDDGMAVATGSWDSFLKIWN P62873 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 Homo sapiens 0.007861143 1 Spodoptera frugiperda LEVO MASNNTASIAQARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLLTPVPASENPFREKKFFCAIL P59768 scFv16 Mus musculus 0.027409588 1 Spodoptera frugiperda LEVO DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLF LQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCR SSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFG AGTKLELKAAALEVLFQ 2-({1-[2-(4-chlorophenyl)-2-methylpropanoyl]piperidin-4-yl}amino)-5,6,7,8-tetrahydroquinazolin-4(3H)-one 0.00042895499999999996 1 A1BE2 singleParticle particle 7.4 ETHANE-PROPANE FEI TALOS ARCTICA FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 200 0.2 11.0 GATAN K3 (6k x 4k) 55.8 1 PHASE FLIPPING AND AMPLITUDE CORRECTION C1 2.92 FSC 0.143 CUT-OFF cryoSPARC 158802 MAXIMUM LIKELIHOOD MAXIMUM LIKELIHOOD emd_47113.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 288 288 288 0 0 0 288 288 288 253.44 253.44 253.44 90.0 90.0 90.0 X Y Z -0.04156078 1.7229811 0.0011443391 0.022356683 0.88 0.88 0.88 0.1 AUTHOR deepEMhancer map emd_47113_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 288 288 288 0 0 0 288 288 288 253.44 253.44 253.44 90.0 90.0 90.0 X Y Z -0.983508 1.9517262 -0.00071940443 0.078350745 0.88 0.88 0.88 AUTHOR half map emd_47113_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 288 288 288 0 0 0 288 288 288 253.44 253.44 253.44 90.0 90.0 90.0 X Y Z -1.0278542 1.8762493 -0.00072379486 0.07838396 0.88 0.88 0.88 AUTHOR half map