2019-04-17 REL PDBe PDBe PDBe 2019-02-11 2019-02-20 2019-02-20 2019-04-17 Defocus in situ tomogram of a Synechocystis cell Rast A Wan W Pfeffer S Engel BD Rast A Schaffer M Albert S Wan W Pfeffer S Beck F Plitzko JM Nickelsen J Engel BD Biogenic regions of cyanobacterial thylakoids form contact sites with the plasma membrane. Nat.Plants UK 5 436 446 2019 30962530 doi:10.1038/s41477-019-0399-7 2055-0278 EMD-4604 associated EM volume Defocus in situ tomogram of a Synechocystis cell Defocus in situ tomogram of a Synechocystis cell 0 Synechocystis sp. PCC 6803 tomography cell 7.0 Quantifoil R1.2/1.3 COPPER 200 GLOW DISCHARGE AIR ETHANE-PROPANE 90 297 FEI VITROBOT MARK IV
Blotting time: 10 sec Blot force: 10.
Vitrious Synechocystis cell milled with a Ga2+ focused ion beam.
OTHER OTHER 30 0.03 3600 93 2000 150
The value given for _emd_sectioning_focused_ion_beam.instrument is FEI Quanta FIB. This is not in a list of allowed values set(['DB235', 'OTHER']) so OTHER is written into the XML file.
 FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 70.0 2.7 0.005 0.005 42000. FEI TITAN KRIOS AUTOGRID HOLDER NITROGEN GIF Quantum LS 20 GATAN K2 SUMMIT (4k x 4k) COUNTING 3838 3710 1.5 1.5
Images were collected in movie-mode at 12 frames per second. Higher tilts had longer exposures.
 1 BACK PROJECTION IMOD 4.9 60 emd_4604.map.gz 1 IMAGE STORED AS SIGNED INTEGER (2 BYTES) 928 928 464 0 0 232 928 928 464 12695.04 12695.04 6347.52 90.0 90.0 90.0 X Y Z -133.0 111.0 1.5327439 11.637847000000001 13.68 13.68 13.68 AUTHOR Defocus in situ tomogram of a Synechocystis cell