2025-01-15 REL RCSB RCSB RCSB 2024-06-12 2024-12-11 2024-12-11 2025-01-15 Canadian Institutes of Health Research (CIHR) 419240 Canada Structure of endogenous asymmetric DPYSL2 from rat model of Alzheimer's disease Khalili Samani E Keszei AFA Mazhab-Jafari MT Dihydropyrimidinase-related protein 2, NEUROPEPTIDE Samani EK Hasan SMN Waas M Keszei AFA Xu X Heydari M Hill ME McLaurin J Kislinger T Mazhab-Jafari MT Unveiling the structural proteome of an Alzheimer's disease rat brain model. Structure UK 33 51 2025 39615488 doi:10.1016/j.str.2024.11.004 0969-2126 2005 STRUE6 EMD-45135 other EM volume EMD-45137 other EM volume EMD-45183 other EM volume 9c86 FULLOVERLAP Dihydropyrimidinase-related protein 2 Dihydropyrimidinase-related protein 2 0 1 Rattus norvegicus TgF344 Brain Dihydropyrimidinase-related protein 2 Rattus norvegicus 0.062349352 4 LEVO MSYQGKKNIPRITSDRLLIKGGKIVNDDQSFYADIYMEDGLIKQIGENLIVPGGVKTIEAHSRMVIPGGIDVHTRFQMPD QGMTSADDFFQGTKAALAGGTTMIIDHVVPEPGTSLLAAFDQWREWADSKSCCDYSLHVDITEWHKGIQEEMEALVKDHG VNSFLVYMAFKDRFQLTDSQIYEVLSVIRDIGAIAQVHAENGDIIAEEQQRILDLGITGPEGHVLSRPEEVEAEAVNRSI TIANQTNCPLYVTKVMSKSAAEVIAQARKKGTVVYGEPITASLGTDGSHYWSKNWAKAAAFVTSPPLSPDPTTPDFLNSL LSCGDLQVTGSAHCTFNTAQKAVGKDNFTLIPEGTNGTEERMSVIWDKAVVTGKMDENQFVAVTSTNAAKVFNLYPRKGR ISVGSDADLVIWDPDSVKTISAKTHNSALEYNIFEGMECRGSPLVVISQGKIVLEDGTLHVTEGSGRYIPRKPFPDFVYK RIKARSRLAELRGVPRGLYDGPVCEVSVTPKTVTPASSAKTSPAKQQAPPVRNLHQSGFSLSGAQIDDNIPRRTTQRIVA PPGGRANITSLG P47942 GLYCINE Rattus norvegicus 7.506699999999999e-05 1 GLY singleParticle particle 7.4 Homemade GOLD HOLEY 3.0 ETHANE 90 278 FEI VITROBOT MARK IV
Cytosolic fraction of rat brain
 FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 0.5 5.0 FEI FALCON IV (4k x 4k) 40.0 1
Ab initio reconstruction
 2.9 FSC 0.143 CUT-OFF cryoSPARC 389444 NOT APPLICABLE NOT APPLICABLE emd_45298.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 200 200 200 0 0 0 200 200 200 206.0 206.0 206.0 90.0 90.0 90.0 X Y Z -0.72099036 1.057428 0.0012005582 0.035947632 1.03 1.03 1.03 0.088 AUTHOR Main Sharpened Map SwissModel in silico model FLEXIBLE FIT REAL emd_45298_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 200 200 200 0 0 0 200 200 200 206.0 206.0 206.0 90.0 90.0 90.0 X Y Z -0.32490242 0.5013917 0.0011747843 0.023442797 1.03 1.03 1.03 AUTHOR Half Map A emd_45298_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 200 200 200 0 0 0 200 200 200 206.0 206.0 206.0 90.0 90.0 90.0 X Y Z -0.29835778 0.5070496 0.0011724767 0.02356308 1.03 1.03 1.03 AUTHOR Half Map B