<?xml version="1.0" encoding="UTF-8"?>
<emd xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="https://ftp.ebi.ac.uk/pub/databases/em_ebi/emdb_related/emdb-schemas/emdb_schemas/v3/v3_0_9_3/emdb.xsd" version="3.0.9.3" emdb_id="EMD-45099">
    <admin>
        <current_status>
            <date>2025-02-12</date>
            <code>REL</code>
            <processing_site>RCSB</processing_site>
        </current_status>
        <sites>
            <deposition>RCSB</deposition>
            <last_processing>RCSB</last_processing>
        </sites>
        <key_dates>
            <deposition>2024-05-28</deposition>
            <header_release>2024-12-18</header_release>
            <map_release>2024-12-18</map_release>
            <update>2025-02-12</update>
        </key_dates>
        <grant_support>
            <grant_reference>
                <funding_body>Howard Hughes Medical Institute (HHMI)</funding_body>
                <country>United States</country>
            </grant_reference>
        </grant_support>
        <title>Leukotriene C4-bound Multidrug Resistance-associated Protein 2 (MRP2)</title>
        <authors_list>
            <author>Koide E</author>
            <author>Chen J</author>
        </authors_list>
        <keywords>ABC transporter, Multidrug resistance, Substrate, TRANSPORT PROTEIN</keywords>
    </admin>
    <crossreferences>
        <citation_list>
            <primary_citation>
                <journal_citation published="true">
                    <author ORCID="0000-0002-8289-1542" order="1">Koide E</author>
                    <author ORCID="0000-0003-4792-5708" order="2">Pietz HL</author>
                    <author order="3">Beltran J</author>
                    <author ORCID="0000-0003-2075-4283" order="4">Chen J</author>
                    <title>Structural basis for the transport and regulation mechanism of the multidrug resistance-associated protein 2.</title>
                    <journal_abbreviation>Nat Commun</journal_abbreviation>
                    <country>UK</country>
                    <volume>16</volume>
                    <first_page>484</first_page>
                    <last_page>484</last_page>
                    <year>2025</year>
                    <external_references type="PUBMED">39779684</external_references>
                    <external_references type="DOI">doi:10.1038/s41467-024-55810-w</external_references>
                    <external_references type="ISSN">2041-1723</external_references>
                </journal_citation>
            </primary_citation>
            <secondary_citation>
                <journal_citation published="true">
                    <author ORCID="0000-0003-3921-3209" order="5">Liebschner D</author>
                    <author ORCID="0000-0002-5052-991X" order="6">Afonine PV</author>
                    <author order="7">Baker ML</author>
                    <author order="8">Bunkoczi G</author>
                    <author ORCID="0000-0003-2492-979X" order="9">Chen VB</author>
                    <author order="10">Croll TI</author>
                    <author ORCID="0000-0002-4871-2096" order="11">Hintze B</author>
                    <author ORCID="0000-0001-6690-8458" order="12">Hung LW</author>
                    <author order="13">Jain S</author>
                    <author order="14">McCoy AJ</author>
                    <author ORCID="0000-0001-8857-9464" order="15">Moriarty NW</author>
                    <author ORCID="0000-0003-3107-2202" order="16">Oeffner RD</author>
                    <author ORCID="0000-0001-9633-6067" order="17">Poon BK</author>
                    <author order="18">Prisant MG</author>
                    <author ORCID="0000-0001-8273-0047" order="19">Read RJ</author>
                    <author ORCID="0000-0002-3311-2944" order="20">Richardson JS</author>
                    <author order="21">Richardson DC</author>
                    <author ORCID="0000-0002-8346-9247" order="22">Sammito MD</author>
                    <author ORCID="0000-0002-0623-3214" order="23">Sobolev OV</author>
                    <author order="24">Stockwell DH</author>
                    <author ORCID="0000-0001-6384-0320" order="25">Terwilliger TC</author>
                    <author order="26">Urzhumtsev AG</author>
                    <author order="27">Videau LL</author>
                    <author order="28">Williams CJ</author>
                    <author ORCID="0000-0001-9333-8219" order="29">Adams PD</author>
                    <title>Macromolecular structure determination using X-rays, neutrons and electrons: recent developments in Phenix</title>
                    <journal_abbreviation>Acta Crystallogr., Sect. D: Biol. Crystallogr.</journal_abbreviation>
                    <country>DK</country>
                    <volume>75</volume>
                    <first_page>861</first_page>
                    <last_page>877</last_page>
                    <year>2019</year>
                    <external_references type="PUBMED">31588918</external_references>
                    <external_references type="DOI">doi:10.1107/S2059798319011471</external_references>
                    <external_references type="ISSN">0907-4449</external_references>
                    <external_references type="CSD">0766</external_references>
                    <external_references type="ASTM">ABCRE6</external_references>
                </journal_citation>
            </secondary_citation>
        </citation_list>
        <pdb_list>
            <pdb_reference>
                <pdb_id>9c12</pdb_id>
                <relationship>
                    <in_frame>FULLOVERLAP</in_frame>
                </relationship>
            </pdb_reference>
        </pdb_list>
    </crossreferences>
    <sample>
        <name>wild type MRP2 bound to its substrate, leukotriene C4</name>
        <supramolecule_list>
            <cell_supramolecule supramolecule_id="1">
                <name>wild type MRP2 bound to its substrate, leukotriene C4</name>
                <parent>0</parent>
                <macromolecule_list>
                    <macromolecule>
                        <macromolecule_id>1</macromolecule_id>
                    </macromolecule>
                </macromolecule_list>
                <natural_source database="NCBI">
                    <organism ncbi="9606">Homo sapiens</organism>
                </natural_source>
            </cell_supramolecule>
        </supramolecule_list>
        <macromolecule_list>
            <protein_or_peptide macromolecule_id="1">
                <name>ATP-binding cassette sub-family C member 2</name>
                <natural_source database="NCBI">
                    <organism ncbi="9606">Homo sapiens</organism>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.174392344</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <recombinant_expression database="NCBI">
                    <recombinant_organism ncbi="9606">Homo sapiens</recombinant_organism>
                </recombinant_expression>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>MLEKFCNSTFWNSSFLDSPEADLPLCFEQTVLVWIPLGYLWLLAPWQLLHVYKSRTKRSSTTKLYLAKQVFVGFLLILAA
IELALVLTEDSGQATVPAVRYTNPSLYLGTWLLVLLIQYSRQWCVQKNSWFLSLFWILSILCGTFQFQTLIRTLLQGDNS
NLAYSCLFFISYGFQILILIFSAFSENNESSNNPSSIASFLSSITYSWYDSIILKGYKRPLTLEDVWEVDEEMKTKTLVS
KFETHMKRELQKARRALQRRQEKSSQQNSGARLPGLNKNQSQSQDALVLEDVEKKKKKSGTKKDVPKSWLMKALFKTFYM
VLLKSFLLKLVNDIFTFVSPQLLKLLISFASDRDTYLWIGYLCAILLFTAALIQSFCLQCYFQLCFKLGVKVRTAIMASV
YKKALTLSNLARKEYTVGETVNLMSVDAQKLMDVTNFMHMLWSSVLQIVLSIFFLWRELGPSVLAGVGVMVLVIPINAIL
STKSKTIQVKNMKNKDKRLKIMNEILSGIKILKYFAWEPSFRDQVQNLRKKELKNLLAFSQLQCVVIFVFQLTPVLVSVV
TFSVYVLVDSNNILDAQKAFTSITLFNILRFPLSMLPMMISSMLQASVSTERLEKYLGGDDLDTSAIRHDCNFDKAMQFS
EASFTWEHDSEATVRDVNLDIMAGQLVAVIGPVGSGKSSLISAMLGEMENVHGHITIKGTTAYVPQQSWIQNGTIKDNIL
FGTEFNEKRYQQVLEACALLPDLEMLPGGDLAEIGEKGINLSGGQKQRISLARATYQNLDIYLLDDPLSAVDAHVGKHIF
NKVLGPNGLLKGKTRLLVTHSMHFLPQVDEIVVLGNGTIVEKGSYSALLAKKGEFAKNLKTFLRHTGPEEEATVHDGSEE
EDDDYGLISSVEEIPEDAASITMRRENSFRRTLSRSSRSNGRHLKSLRNSLKTRNVNSLKEDEELVKGQKLIKKEFIETG
KVKFSIYLEYLQAIGLFSIFFIILAFVMNSVAFIGSNLWLSAWTSDSKIFNSTDYPASQRDMRVGVYGALGLAQGIFVFI
AHFWSAFGFVHASNILHKQLLNNILRAPMRFFDTTPTGRIVNRFAGDISTVDDTLPQSLRSWITCFLGIISTLVMICMAT
PVFTIIVIPLGIIYVSVQMFYVSTSRQLRRLDSVTRSPIYSHFSETVSGLPVIRAFEHQQRFLKHNEVRIDTNQKCVFSW
ITSNRWLAIRLELVGNLTVFFSALMMVIYRDTLSGDTVGFVLSNALNITQTLNWLVRMTSEIETNIVAVERITEYTKVEN
EAPWVTDKRPPPDWPSKGKIQFNNYQVRYRPELDLVLRGITCDIGSMEKIGVVGRTGAGKSSLTNCLFRILEAAGGQIII
DGVDIASIGLHDLREKLTIIPQDPILFSGSLRMNLDPFNNYSDEEIWKALELAHLKSFVASLQLGLSHEVTEAGGNLSIG
QRQLLCLGRALLRKSKILVLDEATAAVDLETDNLIQTTIQNEFAHCTVITIAHRLHTIMDSDKVMVLDNGKIIECGSPEE
LLQIPGPFYFMAKEAGIENVNSTKF</string>
                    <external_references type="UNIPROTKB">Q92887</external_references>
                </sequence>
                <ec_number>7.6.2.-</ec_number>
            </protein_or_peptide>
            <ligand macromolecule_id="2">
                <name>(5~{S},6~{R},7~{E},9~{E},11~{Z},14~{Z})-6-[(2~{R})-2-[[(4~{S})-4-azanyl-5-oxidanyl-5-oxidanylidene-pentanoyl]amino]-3-( 2-hydroxy-2-oxoethylamino)-3-oxidanylidene-propyl]sulfanyl-5-oxidanyl-icosa-7,9,11,14-tetraenoic acid</name>
                <molecular_weight>
                    <theoretical units="MDa">0.000625774</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <formula>LTX</formula>
            </ligand>
            <ligand macromolecule_id="3">
                <name>CHOLESTEROL</name>
                <molecular_weight>
                    <theoretical units="MDa">0.000386654</theoretical>
                </molecular_weight>
                <number_of_copies>5</number_of_copies>
                <formula>CLR</formula>
            </ligand>
            <ligand macromolecule_id="4">
                <name>UNKNOWN LIGAND</name>
                <molecular_weight>
                    <theoretical units="MDa">0.0007901449999999999</theoretical>
                </molecular_weight>
                <number_of_copies>13</number_of_copies>
                <formula>UNL</formula>
            </ligand>
        </macromolecule_list>
    </sample>
    <structure_determination_list>
        <structure_determination structure_determination_id="1">
            <method>singleParticle</method>
            <aggregation_state>particle</aggregation_state>
            <specimen_preparation_list>
                <single_particle_preparation preparation_id="1">
                    <concentration units="mg/mL">4.5</concentration>
                    <buffer>
                        <ph>8.0</ph>
                        <component>
                            <concentration units="%">0.06</concentration>
                            <formula>Digitonin</formula>
                            <name>Digitonin</name>
                        </component>
                        <component>
                            <concentration units="mM">150.0</concentration>
                            <formula>NaCl</formula>
                            <name>sodium chloride</name>
                        </component>
                        <component>
                            <concentration units="mM">50.0</concentration>
                            <formula>Tris</formula>
                            <name>Tris</name>
                        </component>
                        <component>
                            <concentration units="mM">2.0</concentration>
                            <formula>MgCl2</formula>
                            <name>magnesium chloride</name>
                        </component>
                        <component>
                            <concentration units="mM">2.0</concentration>
                            <formula>DTT</formula>
                            <name>DTT</name>
                        </component>
                        <details>Digitonin is solubilized overnight. prior to use, it is filtered using a 0.22 uM filter.</details>
                    </buffer>
                    <grid>
                        <model>Quantifoil R0.6/1</model>
                        <material>GOLD</material>
                        <mesh>300</mesh>
                        <support_film film_type_id="1">
                            <film_material>CARBON</film_material>
                            <film_topology>HOLEY</film_topology>
                            <film_thickness>12.0</film_thickness>
                        </support_film>
                        <pretreatment>
                            <type>GLOW DISCHARGE</type>
                            <time units="s">30</time>
                            <atmosphere>AIR</atmosphere>
                        </pretreatment>
                    </grid>
                    <vitrification>
                        <cryogen_name>ETHANE</cryogen_name>
                        <chamber_humidity units="percentage">100</chamber_humidity>
                        <chamber_temperature units="K">295.15</chamber_temperature>
                        <instrument>FEI VITROBOT MARK IV</instrument>
                    </vitrification>
                    <details>single-particle MRP2 in digitonin micelle. Mixed with 285 uM LTC4.</details>
                </single_particle_preparation>
            </specimen_preparation_list>
            <microscopy_list>
                <single_particle_microscopy microscopy_id="1">
                    <microscope>FEI TITAN KRIOS</microscope>
                    <illumination_mode>FLOOD BEAM</illumination_mode>
                    <imaging_mode>BRIGHT FIELD</imaging_mode>
                    <electron_source>FIELD EMISSION GUN</electron_source>
                    <acceleration_voltage units="kV">300</acceleration_voltage>
                    <nominal_defocus_min units="µm">0.8</nominal_defocus_min>
                    <nominal_defocus_max units="µm">1.6</nominal_defocus_max>
                    <image_recording_list>
                        <image_recording image_recording_id="1">
                            <film_or_detector_model>FEI FALCON IV (4k x 4k)</film_or_detector_model>
                            <average_electron_dose_per_image units="e/Å^2">65.0</average_electron_dose_per_image>
                        </image_recording>
                    </image_recording_list>
                </single_particle_microscopy>
            </microscopy_list>
            <singleparticle_processing image_processing_id="1">
                <image_recording_id>1</image_recording_id>
                <startup_model type_of_model="NONE"/>
                <final_reconstruction>
                    <number_classes_used>1</number_classes_used>
                    <resolution units="Å" res_type="BY AUTHOR">2.75</resolution>
                    <resolution_method>FSC 0.143 CUT-OFF</resolution_method>
                    <number_images_used>83725</number_images_used>
                </final_reconstruction>
                <initial_angle_assignment>
                    <type>MAXIMUM LIKELIHOOD</type>
                </initial_angle_assignment>
                <final_angle_assignment>
                    <type>MAXIMUM LIKELIHOOD</type>
                </final_angle_assignment>
            </singleparticle_processing>
        </structure_determination>
    </structure_determination_list>
    <map format="CCP4" size_kbytes="442369">
        <file>emd_45099.map.gz</file>
        <symmetry>
            <space_group>1</space_group>
        </symmetry>
        <data_type>IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)</data_type>
        <dimensions>
            <col>480</col>
            <row>480</row>
            <sec>480</sec>
        </dimensions>
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        <spacing>
            <x>480</x>
            <y>480</y>
            <z>480</z>
        </spacing>
        <cell>
            <a units="Å">356.63998</a>
            <b units="Å">356.63998</b>
            <c units="Å">356.63998</c>
            <alpha units="deg">90.0</alpha>
            <beta units="deg">90.0</beta>
            <gamma units="deg">90.0</gamma>
        </cell>
        <axis_order>
            <fast>X</fast>
            <medium>Y</medium>
            <slow>Z</slow>
        </axis_order>
        <statistics>
            <minimum>-0.62752575</minimum>
            <maximum>1.143261</maximum>
            <average>0.00015099667</average>
            <std>0.021149907</std>
        </statistics>
        <pixel_spacing>
            <x units="Å">0.743</x>
            <y units="Å">0.743</y>
            <z units="Å">0.743</z>
        </pixel_spacing>
        <contour_list>
            <contour primary="true">
                <level>0.16</level>
                <source>AUTHOR</source>
            </contour>
        </contour_list>
        <label>::::EMDATABANK.org::::EMD-45099::::</label>
        <annotation_details>LTC4-bound MRP2 map</annotation_details>
    </map>
    <interpretation>
        <segmentation_list>
            <segmentation>
                <file>emd_45099_msk_1.map</file>
            </segmentation>
        </segmentation_list>
        <half_map_list>
            <half_map format="CCP4" size_kbytes="442369">
                <file>emd_45099_half_map_2.map.gz</file>
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                    <row>480</row>
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                    <z>480</z>
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                <cell>
                    <a units="Å">356.63998</a>
                    <b units="Å">356.63998</b>
                    <c units="Å">356.63998</c>
                    <alpha units="deg">90.0</alpha>
                    <beta units="deg">90.0</beta>
                    <gamma units="deg">90.0</gamma>
                </cell>
                <axis_order>
                    <fast>X</fast>
                    <medium>Y</medium>
                    <slow>Z</slow>
                </axis_order>
                <statistics>
                    <minimum>-0.50894004</minimum>
                    <maximum>0.8530242</maximum>
                    <average>0.00043822423</average>
                    <std>0.049185004</std>
                </statistics>
                <pixel_spacing>
                    <x units="Å">0.743</x>
                    <y units="Å">0.743</y>
                    <z units="Å">0.743</z>
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                <contour_list>
                    <contour primary="true">
                        <source>AUTHOR</source>
                    </contour>
                </contour_list>
                <label>::::EMDATABANK.org::::EMD-45099::::</label>
                <annotation_details>Half map A</annotation_details>
            </half_map>
            <half_map format="CCP4" size_kbytes="442369">
                <file>emd_45099_half_map_1.map.gz</file>
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                    <space_group>1</space_group>
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                    <gamma units="deg">90.0</gamma>
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                    <fast>X</fast>
                    <medium>Y</medium>
                    <slow>Z</slow>
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                <statistics>
                    <minimum>-0.5142908</minimum>
                    <maximum>0.8327772</maximum>
                    <average>0.0004313705</average>
                    <std>0.049023714</std>
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                <pixel_spacing>
                    <x units="Å">0.743</x>
                    <y units="Å">0.743</y>
                    <z units="Å">0.743</z>
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                <contour_list>
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                        <source>AUTHOR</source>
                    </contour>
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                <label>::::EMDATABANK.org::::EMD-45099::::</label>
                <annotation_details>Half map B</annotation_details>
            </half_map>
        </half_map_list>
    </interpretation>
</emd>
