2024-05-15 REL PDBe RCSB PDBe 2018-12-17 2019-02-27 2019-02-27 2024-05-15 Medical Research Council (United Kingdom) MC_U105184332 United Kingdom Wellcome Trust WT096570 United Kingdom Rae CD tmRNA SmpB trans-translation translation, RIBOSOME Rae CD Gordiyenko Y Ramakrishnan V Science US 363 740 744 2019 30765567 doi:10.1126/science.aav9370 1095-9203 0038 SCIEAS EMD-4476 other EM volume EMD-4477 other EM volume EMD-4478 other EM volume 6q95 FULLOVERLAP 70S ribosome bound by tmRNA-SmpB in the A site 70S ribosome bound by tmRNA-SmpB in the A site 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 70S ribosome bound by tmRNA-SmpB in the A site 1 56 60 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 70S ribosome bound by tmRNA-SmpB in the A site 1 57 Escherichia coli 70S ribosome bound by tmRNA-SmpB in the A site 1 58 Thermus thermophilus HB27 70S ribosome bound by tmRNA-SmpB in the A site 1 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 59 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 70S ribosome bound by tmRNA-SmpB in the A site 1 22 23 Escherichia coli 70S ribosome bound by tmRNA-SmpB in the A site 1 24 Escherichia coli 16S RIBOSOMAL RNA Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.493958281 1 UUUGUUGGAGAGUUUGAUCCUGGCUCAGGGUGAACGCUGGCGGCGUGCCUAAGACAUGCAAGUCGUGCGGGCCGCGGGGU UUUACUCCGUGGUCAGCGGCGGACGGGUGAGUAACGCGUGGGUGACCUACCCGGAAGAGGGGGACAACCCGGGGAAACUC GGGCUAAUCCCCCAUGUGGACCCGCCCCUUGGGGUGUGUCCAAAGGGCUUUGCCCGCUUCCGGAUGGGCCCGCGUCCCAU CAGCUAGUUGGUGGGGUAAUGGCCCACCAAGGCGACGACGGGUAGCCGGUCUGAGAGGAUGGCCGGCCACAGGGGCACUG AGACACGGGCCCCACUCCUACGGGAGGCAGCAGUUAGGAAUCUUCCGCAAUGGGCGCAAGCCUGACGGAGCGACGCCGCU UGGAGGAAGAAGCCCUUCGGGGUGUAAACUCCUGAACCCGGGACGAAACCCCCGACGAGGGGACUGACGGUACCGGGGUA AUAGCGCCGGCCAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGCGCGAGCGUUACCCGGAUUCACUGGGCGUAAAGG GCGUGUAGGCGGCCUGGGGCGUCCCAUGUGAAAGACCACGGCUCAACCGUGGGGGAGCGUGGGAUACGCUCAGGCUAGAC GGUGGGAGAGGGUGGUGGAAUUCCCGGAGUAGCGGUGAAAUGCGCAGAUACCGGGAGGAACGCCGAUGGCGAAGGCAGCC ACCUGGUCCACCCGUGACGCUGAGGCGCGAAAGCGUGGGGAGCAAACCGGAUUAGAUACCCGGGUAGUCCACGCCCUAAA CGAUGCGCGCUAGGUCUCUGGGUCUCCUGGGGGCCGAAGCUAACGCGUUAAGCGCGCCGCCUGGGGAGUACGGCCGCAAG GCUGAAACUCAAAGGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAAGCAACGCGAAGAACCUU ACCAGGCCUUGACAUGCUAGGGAACCCGGGUGAAAGCCUGGGGUGCCCCGCGAGGGGAGCCCUAGCACAGGUGCUGCAUG GCCGUCGUCAGCUCGUGCCGUGAGGUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCCCGCCGUUAGUUGCCAGCGGUUC GGCCGGGCACUCUAACGGGACUGCCCGCGAAAGCGGGAGGAAGGAGGGGACGACGUCUGGUCAGCAUGGCCCUUACGGCC UGGGCGACACACGUGCUACAAUGCCCACUACAAAGCGAUGCCACCCGGCAACGGGGAGCUAAUCGCAAAAAGGUGGGCCC AGUUCGGAUUGGGGUCUGCAACCCGACCCCAUGAAGCCGGAAUCGCUAGUAAUCGCGGAUCAGCCAUGCCGCGGUGAAUA CGUUCCCGGGCCUUGUACACACCGCCCGUCACGCCAUGGGAGCGGGCUCUACCCGAAGUCGCCGGGAGCCUACGGGCAGG CGCCGAGGGUAGGGCCCGUGACUGGGGCGAAGUCGUAACAAGGUAGCUGUACCGGAAGGUGCGGCUGGAUCACCUCCUUU CU AP008226.1 30S ribosomal protein S2 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.027116384999999996 1 LEVO VKELLEAGVHFGHERKRWNPKFARYIYAERNGIHIIDLQKTMEELERTFRFIEDLAMRGGTILFVGTKKQAQDIVRMEAE RAGMPYVNQRWLGGMLTNFKTISQRVHRLEELEALFASPEIEERPKKEQVRLKHELERLQKYLSGFRLLKRLPDAIFVVD PTKEAIAVREARKLFIPVIALADTDSDPDLVDYIIPGNDDAIRSIQLILSRAVDLIIQARGGVVEPSPSYALVQE P80371 30S ribosomal protein S3 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.022975587999999998 1 LEVO GNKIHPIGFRLGITRDWESRWYAGKKQYRHLLLEDQRIRGLLEKELYSAGLARVDIERAADNVAVTVHVAKPGVVIGRGG ERIRVLREELAKLTGKNVALNVQEVQNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSGRIGGAE QARTEWAAQGRVPLHTLRANIDYGFALARTTYGVLGVKAYIFLGEVI P80372 30S ribosomal protein S4 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.024242254 1 LEVO GRYIGPVCRLCRREGVKLYLKGERCYSPKCAMERRPYPPGQHGQKRARRPSDYAVRLREKQKLRRIYGISERQFRNLFEE ASKKKGVTGSVFLGLLESRLDNVVYRLGFAVSRRQARQLVRHGHITVNGRRVDLPSYRVRPGDEIAVAEKSRNLELIRQN LEAMKGRKVGPWLSLDVEGMKGKFLRLPDREDLALPVNEQLVIEFYSR P80373 30S ribosomal protein S5 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.016460192999999998 1 LEVO DFEEKMILIRRTARMQAGGRRFRFGALVVVGDRQGRVGLGFGKAPEVPLAVQKAGYYARRNMVEVPLQNGTIPHEIEVEF GASKIVLKPAAPGTGVIAGAVPRAILELAGVTDILTKELGSRNPINIAYATMEALRQLRTKADVERLRKGE Q5SHQ5 30S ribosomal protein S6 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.011988753 1 LEVO MRRYEVNIVLNPNLDQSQLALEKEIIQRALENYGARVEKVEELGLRRLAYPIAKDPQGYFLWYQVEMPEDRVNDLARELR IRDNVRRVMVVKSQEPFLANA Q5SLP8 30S ribosomal protein S7 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.017919775000000002 1 LEVO ARRRRAEVRQLQPDLVYGDVLVTAFINKIMRDGKKNLAARIFYDACKIIQEKTGQEPLKVFKQAVENVKPRMEVRSRRVG GANYQVPMEVSPRRQQSLALRWLVQAANQRPERRAAVRIAHELMDAAEGKGGAVKKKEDVERMAEANRAYAHYRW P17291 30S ribosomal protein S8 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.01586857 1 LEVO MLTDPIADMLTRIRNATRVYKESTDVPASRFKEEILRILAREGFIKGYERVDVDGKPYLRVYLKYGPRRQGPDPRPEQVI HHIRRISKPGRRVYVGVKEIPRVRRGLGIAILSTSKGVLTDREARKLGVGGELICEVW P0DOY9 30S ribosomal protein S9 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.014298466 1 LEVO EQYYGTGRRKEAVARVFLRPGNGKVTVNGQDFNEYFQGLVRAVAALEPLRAVDALGRFDAYITVRGGGKSGQIDAIKLGI ARALVQYNPDYRAKLKPLGFLTRDARVVERKKYGKHKARRAPQYSKR P80374 30S ribosomal protein S10 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.011398308000000001 1 LEVO KIRIKLRGFDHKTLDASAQKIVEAARRSGAQVSGPIPLPTRVRRFTVIRGPFKHKDSREHFELRTHNRLVDIINPNRKTI EQLMTLDLPTGVEIEIKTV Q5SHN7 30S ribosomal protein S11 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.012606369 1 LEVO KRQVASGRAYIHASYNNTIVTITDPDGNPITWSSGGVIGYKGSRKGTPYAAQLAALDAAKKAMAYGMQSVDVIVRGTGAG REQAIRALQASGLQVKSIVDDTPVPHNGCRPKKKFRKAS P80376 30S ribosomal protein S12 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.013875388 1 LEVO PTINQLVRKGREKVRKKSKVPALKGAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVL IRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKKPKEAA Q5SHN3 30S ribosomal protein S13 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.01362392 1 LEVO ARIAGVEIPRNKRVDVALTYIYGIGKARAKEALEKTGINPATRVKDLTEAEVVRLREYVENTWKLEGELRAEVAANIKRL MDIGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKTVAGKK P80377 30S ribosomal protein S14 type Z Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.007027529 1 LEVO ARKALIEKAKRTPKFKVRAYTRCVRCGRARSVYRFFGLCRICLRELAHKGQLPGVRKASW P0DOY6 30S ribosomal protein S15 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.010447212999999999 1 LEVO PITKEEKQKVIQEFARFPGDTGSTEVQVALLTLRINRLSEHLKVHKKDHHSHRGLLMMVGQRRRLLRYLQREDPERYRAL IEKLGIRG Q5SJ76 30S ribosomal protein S16 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.009995546 1 LEVO MVKIRLARFGSKHNPHYRIVVTDARRKRDGKYIEKIGYYDPRKTTPDWLKVDVERARYWLSVGAQPTDTARRLLRQAGVF RQEA Q5SJH3 30S ribosomal protein S17 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.011880097999999999 1 LEVO PKKVLTGVVVSDKMQKTVTVLVERQFPHPLYGKVIKRSKKYLAHDPEEKYKLGDVVEIIESRPISKRKRFRVLRLVESGR MDLVEKYLIRRQNYESLSKR P0DOY7 30S ribosomal protein S18 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.008155812 1 LEVO KAKVKATLGEFDLRDYRNVEVLKRFLSETGKILPRRRTGLSAKEQRILAKTIKRARILGLLPFTEKLVRK Q5SLQ0 30S ribosomal protein S19 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.009006486000000001 1 LEVO SLKKGVFVDDHLLEKVLELNAKGEKRLIKTWSRRSTIVPEMVGHTIAVYNGKQHVPVYITENMVGHKLGEFAPTRTYRG Q5SHP2 30S ribosomal protein S20 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.010921085999999998 1 LEVO RNLSALKRHRQSLKRRLRNKAKKSAIKTLSKKAIQLAQEGKAEEALKIMRKAESLIDKAAKGSTLHKNAAARRKSRLMRK VRQLLEAAGAPLIGGGLSA P80380 30S ribosomal protein Thx Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.003089655 1 LEVO GKGDRRTRRGKIWRGTYGKYRPRKK Q5SIH3 tRNA-fMet Escherichia coli 0.024816811 1 CGCGGGGUGGAGCAGCCUGGUAGCUCGUCGGGCUCAUAACCCGAAGGUCGUCGG(5MU)UCAAAUCCGGCCCCCGCAACC A tRNA-Phe Escherichia coli 0.024400418 1 GCCCGGAUAGCUCAGUCGGUAGAGCAGGGGAUUUUUAAUCCCCGUGUCCUUGGUUCGAUUCCGAGUCCGGGCACCA mRNA Escherichia coli 0.0018531329999999999 1 UUCAUG 50S ribosomal protein L27 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.009529074 1 LEVO MAHKKGLGSTRNGRDSQAKRLGVKRYEGQVVRAGNILVRQRGTRFKPGKNVGMGRDFTLFALVDGVVEFQDRGRLGRYVH VRPLA P60493 50S ribosomal protein L28 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.009985846 1 LEVO SGKRPIVANSIQRRGKAKREGGVGKKTTGISKRRQYPNLQKVRVRVAGQEITFRVAASHIPKVYELVERAKGLKLEGLSP KEIKKELLK P60494 50S ribosomal protein L29 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.006112247 1 LEVO EARKLSPVELEKLVREKKRELMELRFQASIGQLSQNHKIRDLKRQIARLLT Q5SHP6 50S ribosomal protein L30 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.006799126 1 LEVO MPRLKVKLVKSPIGYPKDQKAALKALGLRRLQQERVLEDTPAIRGNVEKVAHLVRVEVVE Q5SHQ6 50S ribosomal protein L31 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.006640645999999999 1 LEVO KEGIHPKLVPARIICGCGNVIETYSTKPEIYVEVCSKCHPFYTGQQRFVDTEGRVERF Q5SJE1 50S ribosomal protein L32 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.006590854 1 LEVO AKHPVPKKKTSKARRDARRSHHALTPPTLVPCPECKAMKPPHTVCPECGYYAGRKVLEV P80339 50S ribosomal protein L33 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.005602612 1 LEVO LLLECTECKRRNYATEKNKRNTPNKLELRKYCPWCRKHTVHREVK P35871 50S ribosomal protein L34 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.006132448999999999 1 LEVO MKRTWQPNRRKRAKTHGFRARMRTPGGRKVLKRRRQKGRWRLTPAVRKR P80340 50S ribosomal protein L35 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.007374980999999999 1 LEVO PKMKTHKGAKKRVKITASGKVVAMKTGKRHLNWQKSGKEIRQKGRKFVLAKPEAERIKLLLPYE Q5SKU1 23S RIBOSOMAL RNA Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.9479354379999999 1 GGUCAAGAUGGUAAGGGCCCACGGUGGAUGCCUCGGCACCCGAGCCGAUGAAGGACGUGGCUACCUGCGAUAAGCCAGGG GGAGCCGGUAGCGGGCGUGGAUCCCUGGAUGUCCGAAUGGGGGAACCCGGCCGGCGGGAACGCCGGUCACCGCGCUUUUG CGCGGGGGGAACCUGGGGAACUGAAACAUCUCAGUACCCAGAGGAGAGGAAAGAGAAAUCGACUCCCUGAGUAGCGGCGA GCGAAAGGGGACCAGCCUAAACCGUCCGGCUUGUCCGGGCGGGGUCGUGGGGCCCUCGGACACCGAAUCCCCAGCCUAGC CGAAGCUGUUGGGAAGCAGCGCCAGAGAGGGUGAAAGCCCCGUAGGCGAAAGGUGGGGGGAUAGGUGAGGGUACCCGAGU ACCCCGUGGUUCGUGGAGCCAUGGGGGAAUCUGGGCGGACCACCGCCUAAGGCUAAGUACUCCGGGUGACCGAUAGCGCA CCAGUACCGUGAGGGAAAGGUGAAAAGAACCCCGGGAGGGGAGUGAAAUAGAGCCUGAAACCGUGGGCUUACAAGCAGUC ACGGCCCCGCAAGGGGUUGUGGCGUGCCUAUUGAAGCAUGAGCCGGCGACUCACGGUCGUGGGCGAGCUUAAGCCGUUGA GGCGGAGGCGUAGGGAAACCGAGUCCGAACAGGGCGCAAGCGGGCCGCACGCGGCCCGCAAAGUCCGCGGCCGUGGACCC GAAACCGGGCGAGCUAGCCCUGGCCAGGGUGAAGCUGGGGUGAGACCCAGUGGAGGCCCGAACCGGUGGGGGAUGCAAAC CCCUCGGAUGAGCUGGGGCUAGGAGUGAAAAGCUAACCGAGCCCGGAGAUAGCUGGUUCUCCCCGAAAUGACUUUAGGGU CAGCCUCAGGCGCUGACUGGGGCCUGUAGAGCACUGAUAGGGCUAGGGGGCCCACCAGCCUACCAAACCCUGUCAAACUC CGAAGGGUCCCAGGUGGAGCCUGGGAGUGAGGGCGCGAGCGAUAACGUCCGCGUCCGAGCGCGGGAACAACCGAGACCGC CAGCUAAGGCCCCCAAGUCUGGGCUAAGUGGUAAAGGAUGUGGCGCCGCGAAGACAGCCAGGAGGUUGGCUUAGAAGCAG CCAUCCUUUAAAGAGUGCGUAAUAGCUCACUGGUCGAGUGGCGCCGCGCCGAAAAUGAUCGGGGCUUAAGCCCAGCGCCG AAGCUGCGGGUCUGGGGGAUGACCCCAGGCGGUAGGGGAGCGUUCCCGAUGCCGAUGAAGGCCGACCCGCGAGGGCGGCU GGAGGUAAGGGAAGUGCGAAUGCCGGCAUGAGUAACGAUAAAGAGGGUGAGAAUCCCUCUCGCCGUAAGCCCAAGGGUUC CUACGCAAUGGUCGUCAGCGUAGGGUUAGGCGGGACCUAAGGUGAAGCCGAAAGGCGUAGCCGAAGGGCAGCCGGUUAAU AUUCCGGCCCUUCCCGCAGGUGCGAUGGGGGGACGCUCUAGGCUAGGGGGACCGGAGCCAUGGACGAGCCCGGCCAGAAG CGCAGGGUGGGAGGUAGGCAAAUCCGCCUCCCAACAAGCUCUGCGUGGUGGGGAAGCCCGUACGGGUGACAACCCCCCGA AGCCAGGGAGCCAAGAAAAGCCUCUAAGCACAACCUGCGGGAACCCGUACCGCAAACCGACACAGGUGGGCGGGUGCAAG AGCACUCAGGCGCGCGGGAGAACCCUCGCCAAGGAACUCUGCAAGUUGGCCCCGUAACUUCGGGAGAAGGGGUGCUCCCU GGGGUGAUGAGCCCCGGGGAGCCGCAGUGAACAGGCUCUGGCGACUGUUUACCAAAAACACAGCUCUCUGCGAACUCGUA AGAGGAGGUAUAGGGAGCGACGCUUGCCCGGUGCCGGAAGGUCAAGGGGAGGGGUGCAAGCCCCGAACCGAAGCCCCGGU GAACGGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCUGCACGAAAAGCGUAA CGACCGGAGCGCUGUCUCGGCGAGGGACCCGGUGAAAUUGAACUGGCCGUGAAGAUGCGGCCUACCCGUGGCAGGACGAA AAGACCCCGUGGAGCUUUACUGCAGCCUGGUGUUGGCUCUUGGUCGCGCCUGCGUAGGAUAGGUGGGAGCCUGUGAACCC CCGCCUCCGGGUGGGGGGGAGGCGCCGGUGAAAUACCACCCUGGCGCGGCUGGGGGCCUAACCCUCGGAUGGGGGGACAG CGCUUGGCGGGCAGUUUGACUGGGGCGGUCGCCUCCUAAAAGGUAACGGAGGCGCCCAAAGGUCCCCUCAGGCGGGACGG AAAUCCGCCGGAGAGCGCAAGGGUAGAAGGGGGCCUGACUGCGAGGCCUGCAAGCCGAGCAGGGGCGAAAGCCGGGCCUA GUGAACCGGUGGUCCCGUGUGGAAGGGCCAUCGAUCAACGGAUAAAAGUUACCCCGGGGAUAACAGGCUGAUCUCCCCCG AGCGUCCACAGCGGCGGGGAGGUUUGGCACCUCGAUGUCGGCUCGUCGCAUCCUGGGGCUGAAGAAGGUCCCAAGGGUUG GGCUGUUCGCCCAUUAAAGCGGCACGCGAGCUGGGUUCAGAACGUCGUGAGACAGUUCGGUCUCUAUCCGCCACGGGCGC AGGAGGCUUGAGGGGGGCUCUUCCUAGUACGAGAGGACCGGAAGGGACGCACCUCUGGUUUCCCAGCUGUCCCUCCAGGG GCAUAAGCUGGGUAGCCAUGUGCGGAAGGGAUAACCGCUGAAAGCAUCUAAGCGGGAAGCCCGCCCCAAGAUGAGGCCUC CCACGGCGUCAAGCCGGUAAGGACCCGGGAAGACCACCCGGUGGAUGGGCCGGGGGUGUAAGCGCCGCGAGGCGUUGAGC CGACCGGUCCCAAUCGUCCGAGGUCUUGACCCCUC 5S RIBOSOMAL RNA Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.038553 1 UCCCCCGUGCCCAUAGCGGCGUGGAACCACCCGUUCCCAUUCCGAACACGGAAGUGAAACGCGCCAGCGCCGAUGGUACU GGGCGGGCGACCGCCUGGGAGAGUAGGUCGGUGCGGGGG AP008226.1 50S ribosomal protein L1 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.024872721 1 LEVO MPKHGKRYRALLEKVDPNKVYTIDEAARLVKELATAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAK GEKIKEAEEAGADYVGGEEIIQKILDGWMDFDAVVATPDVMGAVGSKLGRILGPRGLLPNPKAGTVGFNIGEIIREIKAG RIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGTFLRSVYVTTTMGPSVRINPHS Q5SLP7 50S ribosomal protein L2 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.029985798999999997 1 LEVO AVKKFKPYTPSRRFMTVADFSEITKTEPEKSLVKPLKKTGGRNNQGRITVRFRGGGHKRLYRIIDFKRWDKVGIPAKVAA IEYDPNRSARIALLHYVDGEKRYIIAPDGLQVGQQVVAGPDAPIQVGNALPLRFIPVGTVVHAVELEPKKGAKLARAAGT SAQIQGREGDYVILRLPSGELRKVHGECYATVGAVGNADHKNIVLGKAGRSRWLGRRPHVRGAAMNPVDHPHGGGEGRAP RGRPPASPWGWQTKGLKTRKRRKPSSRFIIAR P60405 50S ribosomal protein L3 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.022321030999999998 1 LEVO MKGILGVKVGMTRIFRDDRAVPVTVILAGPCPVVQRRTPEKDGYTAVQLGFLPQNPKRVNRPLKGHFAKAGVEPVRILRE IRDFNPEGDTVTVEIFKPGERVDVTGTSKGRGFAGVMKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGKKMAGHY GAERVTVMNLEVVDVIPEENLLLVKGAVPGPNGGLVIVRETKKAA Q5SHN8 50S ribosomal protein L4 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.023071721 1 LEVO MKEVAVYQIPVLSPSGRRELAADLPAEINPHLLWEVVRWQLAKRRRGTASTKTRGEVAYSGRKIWPQKHTGRARHGDIGA PIFVGGGVVFGPKPRDYSYTLPKKVRKKGLAMAVADRAREGKLLLVEAFAGVNGKTKEFLAWAKEAGLDGSESVLLVTGN ELVRRAARNLPWVVTLAPEGLNVYDIVRTERLVMDLDAWEVFQNRIGG Q5SHN9 50S ribosomal protein L5 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.020930400000000002 1 LEVO PLDVALKRKYYEEVRPELIRRFGYQNVWEVPRLEKVVINQGLGEAKEDARILEKAAQELALITGQKPAVTRAKKSISNFK LRKGMPIGLRVTLRRDRMWIFLEKLLNVALPRIRDFRGLNPNSFDGRGNYNLGLREQLIFPEITYDMVDALRGMDIAVVT TAETDEEARALLELLGFPFRK Q5SHQ0 50S ribosomal protein L6 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.017476278999999997 1 LEVO PKGVSVEVAPGRVKVKGPKGELEVPVSPEMRVVVEEGVVRVERPSDERRHKSLHGLTRTLIANAVKGVSEGYSKELLIKG IGYRARLVGRALELTVGFSHPVVVEPPEGITFEVPEPTRVRVSGIDKQKVGQVAANIRAIRKPSAYHEKGIYYAGEPVRL P0DOY8 50S ribosomal protein L9 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.006536709 1 LEVO MKVILLEPLENLGDVGQVVDVKPGYARNYLLPRGLAVLATESNLKALEARIRAQAKRLAA Q5SLQ1 50S ribosomal protein L13 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.015828771 1 LEVO MKTYVPKQVEPRWVLIDAEGKTLGRLATKIATLLRGKHRPDWTPNVAMGDFVVVVNADKIRVTGKKLEQKIYTRYSGYPG GLKKIPLEKMLATHPERVLEHAVKGMLPKGPLGRRLFKRLKVYAGPDHPHQAQRPEKLE P60488 50S ribosomal protein L14 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.013323611999999999 1 LEVO MIQPQTYLEVADNTGARKIMCIRVLKGSNAKYATVGDVIVASVKEAIPRGAVKEGDVVKAVVVRTKKEIKRPDGSAIRFD DNAAVIINNQLEPRGTRVFGPVARELREKGFMKIVSLAPEVL Q5SHP8 50S ribosomal protein L15 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.015858525999999998 1 LEVO DLRPNPGANKRRKRVGRGPGSGHGKTATRGHKGQKSRSGGLKDPRRFEGGRSTTLMRLPKRGMQGQVPGEIKRPRYQGVN LKDLARFEGEVTPELLVRAGLLKKGYRLKILGEGEAKPLKVVAHAFSKSALEKLKAAGGEPVLLEA Q5SHQ7 50S ribosomal protein L16 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.015364049999999999 1 LEVO RMKYRKQQRGRLKGATKGGDYVAFGDYGLVALEPAWITAQQIEAARVAMVRHFRRGGKIFIRIFPDKPYTKKPLEVRMGK GKGNVEGYVAVVKPGRVMFEVAGVTEEQAMEALRIAGHKLPIKTKIVRRDAYDEAQ P60489 50S ribosomal protein L17 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.013618951999999998 1 LEVO RHLKSGRKLNRHSSHRLALYRNQAKSLLTHGRITTTVPKAKELRGFVDHLIHLAKRGDLHARRLVLRDLQDVKLVRKLFD EIAPRYRDRQGGYTRVLKLAERRRGDGAPLALVELVE Q9Z9H5 50S ribosomal protein L18 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.010998918 1 LEVO KFRVRNRIKRTGRLRLSVFRSLKHIYAQIIDDEKGVTLVSASSLALKLKGNKTEVARQVGRALAEKALALGIKQVAFDRG PYKYHGRVKALAEGAREGG Q5SHQ4 50S ribosomal protein L19 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.016289890999999997 1 LEVO MNRGALIKLVESRYVRTDLPEFRPGDTVRVSYKVKEGNRTRIQDFEGIVIRIRRNGFNTTFTVRKVSYGVGVERIFPLHS PLIQKIDIVQRGRARRAKLYFIRNLSDREIRRKLRADRKRIDQDRAAERAAKEEAQKA P60490 50S ribosomal protein L20 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.013648081 1 LEVO PRAKTGVVRRRKHKKILKLAKGYWGLRSKSFRKARETLFAAGNYAYAHRKRRKRDFRRLWIVRINAACRQHGLNYSTFIH GLKKAGIEVDRKNLADLAVREPQVFAELVERAKAAQG P60491 50S ribosomal protein L21 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.011069153 1 LEVO MFAIVKTGGKQYRVEPGLKLRVEKLDAEPGATVELPVLLLGGEKTVVGTPVVEGASVVAEVLGHGRGKKILVSKFKAKVQ YRRKKGHRQPYTELLIKEIRG P60492 50S ribosomal protein L22 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.012808055 1 LEVO MEAKAIARYVRISPRKVRLVVDLIRGKSLEEARNILRYTNKRGAYFVAKVLESAAANAVNNHDMLEDRLYVKAAYVDEGP ALKRVLPRARGRADIIKKRTSHITVILGEKHGK Q5SHP3 50S ribosomal protein L23 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.010386274 1 LEVO TAYDVILAPVLSEKAYAGFAEGKYTFWVHPKATKTEIKNAVETAFKVKVVKVNTLHVRGKKKRLGRYLGKRPDRKKAIVQ VAPGQKIEALEGL Q5SHP0 50S ribosomal protein L24 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.011181657999999999 1 LEVO RVKMHVKKGDTVLVASGKYKGRVGKVKEVLPKKYAVIVEGVNIVKKAVRVSPKYPQGGFIEKEAPLHASKVRPICPACGK PTRVRKKFLENGKKIRVCAKC Q5SHP9 50S ribosomal protein L25 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.010954641 1 LEVO YRLKAYYREGEKPSALRRAGKLPGVMYNRHLNRKVYVDLVEFDKVFRQASIHHVIVLELPDGQSLPTLVRQVNLDKRRRR PEHVDFFVLSDD Q5SHZ1 SsrA-binding protein Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.01678549 1 Escherichia coli LEVO MAPVLENRRARHDYEILETYEAGIALKGTEVKSLRAGKVDFTGSFARFEDGELYLENLYIAPYEKGSYANVDPRRKRKLL LHKHELRRLLGKVEQKGLTLVPLKIYFNERGYAKVLLGLARGKKAYEKRREDKKEAVRRALEEL Q8RR57 Nascent peptide MET-ALA Escherichia coli 0.00022028899999999998 1 Escherichia coli LEVO MA 50S ribosomal protein L36 Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) 0.004435411 1 Escherichia coli LEVO MKVRASVKRICDKCKVIRRHGRVYVICENPKHKQRQG Q72I28 50S RIBOSOMAL PROTEIN L10 AND L11 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.011932700999999999 2 LEVO (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) transfer-messenger RNA (tmRNA) Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 0.112818945 1 GGGGGUGAAACGGUCUCGACGGGGGUCGCCGAGGGCGUGGCUGCGCGCCGAGGUGCGGGUGGCCUCGUAAAAACCCGCAA CGGCAUAACUGCCAACACCAACUACGCUCUCGCGGCUUAAUGACCGCGACCUCGCCCGGUAGCCCUGCCGGGGGCUCACC GGAAGCGGGGACACAAACCCGGCUAGCCCGGGGCCACGCCCUCUAACCCCGGGCGAAGCUUGAAGGGGGCUCGCUCCUGG CCGCCCGUCCGCGGGCCAAGCCAGGAGGACACGCGAAACGCGGACUACGCGCGUAGAGGCCCGCCGUAGGGACCUUCGGA CGGGGGUUCGACUCCCCCCACCUCCACCA MAGNESIUM ION 2.4305e-05 637 MG ZINC ION 6.5409e-05 3 ZN singleParticle particle 7.5 ETHANE FEI POLARA 300 FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 FEI FALCON II (4k x 4k) 42.0 1 EMD-3493 3.7 FSC 0.143 CUT-OFF 24400 MAXIMUM LIKELIHOOD RELION MAXIMUM LIKELIHOOD RELION