2019-06-12 REL PDBe PDBe PDBe 2018-11-28 2019-03-06 2019-03-06 2019-06-12 Structure of right-handed protein cage consisting of 24 eleven-membered ring proteins held together by gold (I) bridges. Malay AD Miyazaki N Biela AP Iwasaki K Heddle JG Malay AD Miyazaki N Biela A Chakraborti S Majsterkiewicz K Stupka I Kaplan CS Kowalczyk A Piette BMAG Hochberg GKA Wu D Wrobel TP Fineberg A Kushwah MS Kelemen M Vavpetic P Pelicon P Kukura P Benesch JLP Iwasaki K Heddle JG An ultra-stable gold-coordinated protein cage displaying reversible assembly. Nature UK 569 438 442 2019 31068697 doi:10.1038/s41586-019-1185-4 1476-4687 0006 NATUAS EMD-6965 other EM volume
lower resolution map with lower symmetry applied
 EMD-4444 associated EM volume
Structure of right-handed protein cage consisting of 24 eleven-membered ring proteins held together by gold (I) bridges.
 6rvw FULLOVERLAP Designed protein cage consisting of C11-symmetric TRAP proteins coordinated by Au+1 ions Designed protein cage consisting of C11-symmetric TRAP proteins coordinated by Au+1 ions 0 1 Geobacillus stearothermophilus Escherichia coli BL21(DE3) pET21b 2.2 Transcription attenuation protein MtrB Geobacillus stearothermophilus 0.008161224 264 Escherichia coli LEVO MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSECLDKGEVLIAQFTEHTSAIKVRGKAYIQTSHGVIESEGKK GOLD ION 0.000196967 120 AU singleParticle particle 0.89 8.0 ETHANE 100 277 FEI VITROBOT MARK IV
3.0 s blotting time.
FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 FEI TITAN KRIOS AUTOGRID HOLDER NITROGEN FEI FALCON II (4k x 4k) INTEGRATING 4096 4096 40.0 1
An Initial model was produced by EMAN1.9 using the images acquired using JEM2200FS(JEOL,Tokyo) equipped with K2 Summit. The model was refined using RELION up to 16.5A. This was used as a reference model to start RELION in this experiment.
 3.7 FSC 0.143 CUT-OFF 176463 PROJECTION MATCHING PROJECTION MATCHING RELION emd_4444.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 220 220 220 0 0 0 220 220 220 382.8 382.8 382.8 90.0 90.0 90.0 X Y Z -0.19564073 0.44655716 0.0025878085 0.024305884 1.7399999 1.7399999 1.7399999 0.115 AUTHOR map of the right-handed protein cage 4V4F AA 4V4F AB 4V4F AC 4V4F AD 4V4F AE 4V4F AF 4V4F AG 4V4F AH 4V4F AI 4V4F AJ 4V4F AK OTHER gradient-driven minimization of combined map and restraints target REAL