F97L integrating mode

2019-05-01 REL PDBe PDBe PDBe 2018-11-13 2019-02-20 2019-02-20 2019-05-01 F97L integrating mode Song B Flegler V Makbul C Rasmussen T Bottcher B Song B Lenhart J Flegler VJ Makbul C Rasmussen T Bottcher B Capabilities of the Falcon III detector for single-particle structure determination. Ultramicroscopy NE 203 145 154 2019 30738626 doi:10.1016/j.ultramic.2019.01.002 0304-3991 0953 ULTRDG EMD-4417 associated EM volume Hepatitis B virus Hepatitis B virus 0 1

core protein was expressed in E.coli

Hepatitis B virus Homo sapiens Escherichia coli 4.8 340.0 4 VIRUS-LIKE PARTICLE OTHER false false Hepatitis B virus core protein Hepatitis B virus Escherichia coli LEVO MDIDPYKEFGATVELLSFLPSDFFPSVRDLLDTASALYREALESPEHCSPHHTALRQAILCWGELMTLAT WVGVNLEDPASRDLVVSYVNTNMGLKLRQLLWFHISCLTFGRETVIEYLVSFGVWIRTPPAYRPPNAPIL STLPETTVVRRRGRSPRKRTPSPRKRRSQSPRRRRSQSRESQC singleParticle particle 4 7.5

25 mM Tris

Quantifoil, UltrAuFoil, R1.2/1.3 GOLD 300 HOLEY 50.0 GLOW DISCHARGE AIR ETHANE 100 277 FEI VITROBOT MARK IV

Quantifoil 300 mesh gold ultrafoil grids R 1.2/1.3 were used (Quantifoil Micro Tools GmbH, Jena, Germany). Grids were glow discharged in air at a pressure of 2.2x10-2 Torr for 2 min at medium power with a Harrick Plasma cleaner (PDC-002). Subsequently, 3-4 ul of the sample was pipetted onto the glow discharged grids and plunge frozen in liquid Ethane with a Vitrobot IV (FEI). The sample chamber of the Vitrobot was maintained at 4C and 100% humidity. Wait time between sample application and blotting was 45 s, the drain time 0 s, the blot time 3 s and the blot force 0..

FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 70.0 2.7 1.0 0.57 2.0 3.18 75000. FEI TITAN KRIOS AUTOGRID HOLDER NITROGEN 79.0 80.0

data has been recorded in integrating mode 40 frames per movie

FEI FALCON III (4k x 4k) INTEGRATING 4096 4096 1 2928 3.0 50.0

images were collected in movie mode (40 frames in total)

Movies were motion corrected and exposure weighted with motioncor2. The defocus was determined for the motion corrected and exposure weighted averages with ctffind4

110487 RELION EMD-0272

previously determined

1 I FOURIER SPACE 2.38 FSC 0.143 CUT-OFF RELION 3.0 39382 MAXIMUM LIKELIHOOD RELION 3.0 MAXIMUM LIKELIHOOD RELION 3.0 3 RELION 3.0 emd_4417.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 400 400 400 0 0 0 400 400 400 425.40002 425.40002 425.40002 90.0 90.0 90.0 X Y Z -0.33252048 0.5035184 0.00030128847 0.030713046 1.0635 1.0635 1.0635 0.05 AUTHOR ::::EMDATABANK.org::::EMD-4417:::: AB INITIO MODEL RECIPROCAL 59.0 emd_4417_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 400 400 400 0 0 0 400 400 400 425.40002 425.40002 425.40002 90.0 90.0 90.0 X Y Z -0.017285213 0.06434239 0.00030053573 0.006744315 1.0635 1.0635 1.0635 AUTHOR ::::EMDATABANK.org::::EMD-4417:::: emd_4417_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 400 400 400 0 0 0 400 400 400 425.40002 425.40002 425.40002 90.0 90.0 90.0 X Y Z -0.016993603 0.06474376 0.00030467668 0.006747623 1.0635 1.0635 1.0635 AUTHOR ::::EMDATABANK.org::::EMD-4417::::