2025-04-16 REL RCSB INITIAL_RELEASE REPOSITORY DATABASE_REFERENCES citation citation_author em_admin _em_admin.last_update RCSB RCSB 2024-03-03 2025-01-22 2025-01-22 2025-04-16 National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID) 75N93022C00035 United States TolQ inner membrane protein from Acinetobacter baumannii Quade B Otwinowski Z Borek D inner membrane protein complex, Structural Genomics, Center for Structural Biology of Infectious Diseases, CSBID, MEMBRANE PROTEIN Karimullina E Guo Y Khan HM Emde T Quade B Di Leo R Otwinowski Z Tieleman DP Borek D Savchenko A Structural architecture of TolQ-TolR inner membrane protein complex from opportunistic pathogen Acinetobacter baumannii. Sci Adv US 11 eadq9845 eadq9845 2025 40184442 doi:10.1126/sciadv.adq9845 2375-2548 Karimullina E Guo Y Khan HM Emde T Quade B Leo RD Otwinowski Z Tieleman Peter D Borek D Savchenko A Structural architecture of TolQ-TolR inner membrane protein complex from opportunistic pathogen Acinetobacter baumannii. Biorxiv US 2024 38948712 doi:10.1101/2024.06.19.599759 2692-8205 9avi FULLOVERLAP TolQ inner membrane protein TolQ inner membrane protein 0 1 Acinetobacter baumannii Tol-Pal system protein TolQ Acinetobacter baumannii 0.025390193 5 Escherichia coli LEVO MATNIESTLHISDLILQASPVVQLVMLILLLASIFSWYLIAKLHMSYKKARQDDEHFQKMFWSGAELNTLYNNAQLNSKR SGLEDIFYQGLSEFFKLKKRQAPTSQMIEGTERILRVGLSRDQGSLEYGLGTLASIGSVAPYIGLFGTVWGIMNAFIGLA AVDQVTLATVAPGIAEALIATAIGLFAAIPAVLAFNHFTAKSESVYSDRALFAEEMIALLQRQSVGSSQEDA V5VAS0 singleParticle particle 5.7 8.0 50.0 TRIS Quantifoil R1.2/1.3 GOLD 300 GLOW DISCHARGE AIR PROPANE 100 277 FEI VITROBOT MARK IV
50mM Tris pH 8.0; 150mM NaCl; 0.5 mM TCEP
 FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 70.0 0.001 2.0 105000.0 NITROGEN GATAN K3 (6k x 4k) 2718 4.4 100.0
Images were collected as movies, with each movie containing 125 frames. The beam-image shift method, utilizing a 3x3 pattern, was used, with one image per grid hole.
 1
Patch motion and patch CTF correction with binning to 0.833 A/pixel.
472724
Manual picking to generate templates. Template based autopicking to get 472724 particles. Iterative 2D classification to get 246741 particles.
 4 C5 3.02 FSC 0.143 CUT-OFF cryoSPARC
Map was post processed using DeepEMHancer to guide refinement. The deposited maps are pre-DeepEMHancer
215170 MAXIMUM LIKELIHOOD MAXIMUM LIKELIHOOD 1 emd_43902.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 400 400 400 0 0 0 400 400 400 333.2 333.2 333.2 90.0 90.0 90.0 X Y Z -0.19440597 0.4497866 0.00025368002 0.009321547 0.833 0.833 0.833 0.09 AUTHOR TolQ inner membrane protein from Acinetobacter baumannii SwissModel in silico model emd_43902_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 400 400 400 0 0 0 400 400 400 333.2 333.2 333.2 90.0 90.0 90.0 X Y Z -0.22022891 0.47892773 0.00044440237 0.012581634 0.833 0.833 0.833 AUTHOR Half Map A emd_43902_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 400 400 400 0 0 0 400 400 400 333.2 333.2 333.2 90.0 90.0 90.0 X Y Z -0.18042149 0.46215874 0.00044355926 0.012567288 0.833 0.833 0.833 AUTHOR Half Map B