2025-04-23 REL RCSB INITIAL_RELEASE REPOSITORY DATABASE_REFERENCES citation citation_author em_admin _citation.country _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.title _citation.year _em_admin.last_update DATABASE_REFERENCES citation citation_author em_admin _citation.journal_volume _citation.page_first _citation.page_last _citation_author.identifier_ORCID _em_admin.last_update RCSB RCSB 2024-02-20 2025-01-29 2025-01-29 2025-04-23 Other government 0000-0003-1808-9851 SARS-CoV-2 M protein dimer in complex with JNJ-9676 and Fab-B Yin Y Van Damme E SARS-COV-2, M protein, Inhibitor bound complex, VIRAL PROTEIN-Immune System complex Van Damme E Abeywickrema P Yin Y Xie J Jacobs S Mann MK Doijen J Miller R Piassek M Marsili S Subramanian M Gottlieb L Abdelnabi R Van Gool M Van den Broeck N De Pauw I Diels A Vermeulen P Temmerman K Scobey T Mattocks M Schafer A Jochmans D De Jonghe S Leyssen P Chiu W Diosa Toro M Zwaagstra M Leijs AA De Gruyter HLM Buyck C Van Den Heede K Jacobs F Van den Eynde C Thijs L Raeymaekers V Miller S Del Rosario A Neyts J Peeters D Baric RS van Kuppeveld FJM Snijder EJ van Hemert MJ Monshouwer M Sharma S Draghia-Akli R Koul A Van Loock M A small-molecule SARS-CoV-2 inhibitor targeting the membrane protein. Nature UK 640 506 513 2025 40140563 doi:10.1038/s41586-025-08651-6 1476-4687 0006 NATUAS 8w2e FULLOVERLAP Dimer complex of SARS-CoV-2 M protein with JNJ-9676 and Fab B Dimer complex of SARS-CoV-2 M protein with JNJ-9676 and Fab B 0 1 2 3 Homo sapiens Membrane protein SARS-CoV-2 pseudovirus 0.029977674 2 Homo sapiens LEVO MADSNGTITVEELKKLLEQWNLVIGFLFLTWICLLQFAYANRNRFLYIIKLIFLWLLWPVTLACFVLAAVYRINWITGGI AIAMACLVGLMWLSYFIASFRLFARTRSMWSFNPETNILLNVPLHGTILTRPLLESELVIGAVILRGHLRIAGHHLGRCD IKDLPKEITVATSRTLSYYKLGASQRVAGDSGFAAYSRYRIGNYKLNTDHSSSSDNIALLVQSNSLEVLFQGPSRGGSGA AAGSGSGSGSPSRLEEELRRRLTEGSEPEA P0DTC5 Fab B Heavy Chain Homo sapiens 0.024157423999999997 2 Escherichia coli LEVO ASDIVMTQSPASLAVSLGQRATISCKASQSIDYDGDNYMNWYQQKPGQPPKLLIYTTSNLESGIPARFSGSGSGTDFTLN IHPVEEGDAATYYCQQNNEDPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSE RQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC Fab B Light Chain Homo sapiens 0.024211092 2 Escherichia coli LEVO EVQLQQSGPELVKPGASMKISCKTSGYSFTGYTMNWVKQSHGKNLEWIGLINPYNGDTSYNQKFKGKATLTVDKSSSTAY MELLSLTSEDSAVYYCEVINTYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLS SGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCGSGSHHHHHH (6S,8R)-N-(3-cyanophenyl)-5-{4-[difluoro(phenyl)methyl]phenyl}-6-methyl-4-oxo-4,5,6,7-tetrahydropyrazolo[1,5-a]pyrazine-3-carboxamide 0.000497495 2 A1AE8 singleParticle particle 7.5 NITROGEN TFS GLACIOS FLOOD BEAM DIFFRACTION FIELD EMISSION GUN 200 0.8 2.2 FEI FALCON IV (4k x 4k) 1.0 1 7VGS 3.06 FSC 0.143 CUT-OFF 484616 NOT APPLICABLE NOT APPLICABLE emd_43745.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 320 320 320 0 0 0 320 320 320 291.2 291.2 291.2 90.0 90.0 90.0 X Y Z -1.1683683 1.7582474 -0.00007137959 0.0320704 0.91 0.91 0.91 0.156 AUTHOR SARS-CoV-2 M protein dimer in complex with JNJ-9676 and Fab-B emd_43745_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 320 320 320 0 0 0 320 320 320 291.2 291.2 291.2 90.0 90.0 90.0 X Y Z -0.31601205 0.5867952 0.00041653358 0.040173505 0.91 0.91 0.91 AUTHOR Half map A emd_43745_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 320 320 320 0 0 0 320 320 320 291.2 291.2 291.2 90.0 90.0 90.0 X Y Z -0.32239488 0.59664416 0.00041812973 0.039990257 0.91 0.91 0.91 AUTHOR Half map B