2024-10-16 REL RCSB RCSB RCSB 2023-12-01 2024-05-22 2024-05-22 2024-10-16 Not funded Structure of the Human Respirovirus 3 Fusion Protein Bound to Camelid Nanobodies 1D10 and 4C06 Johnson NJ Ramamohan AR McLellan JS viral fusion protein, camelid nanobodies, viral glycoprotein, membrane fusion, VIRAL PROTEIN, VIRAL PROTEIN-IMMUNE SYSTEM complex Johnson NV van Scherpenzeel RC Bakkers MJG Ramamohan AR van Overveld D Le L Langedijk JPM Kolkman JA McLellan JS Structural basis for potent neutralization of human respirovirus type 3 by protective single-domain camelid antibodies. Nat Commun UK 15 5458 5458 2024 38937429 doi:10.1038/s41467-024-49757-1 2041-1723 EMD-42983 other EM volume 8v62 FULLOVERLAP Prefusion Human Respirovirus 3 Fusion Protein Bound to Camelid Nanobodies 1D10 and 4C06 Prefusion Human Respirovirus 3 Fusion Protein Bound to Camelid Nanobodies 1D10 and 4C06 0 1 2 3 Human respirovirus 3 0.2775 Fusion glycoprotein F0 Human respirovirus 3 0.057336508 3 Homo sapiens LEVO MPISILLIITTMIMASHCQIDITKLQHVGVLVNSPKGMKISQNFETRYLILSLIPKIEDSNSCGDQQIKQYKRLLDRLII PLYDGLRLQKDVIVTNQESNENTDPRTERFFGGVIGTIALGVATSAQITAAVALVEAKQARSDIEKLKEAIRDTNKAVQS VQSSPGNLIVAIKSVQDYVNKEIVPCIARLGCEACGLLLGLALDQHYSELTNIFGDNIGSLQEKGIKLQGIASLYRTNIT EIFTTSTVDKYDIYDLLFTESIKVRVIDVDLNDYSITLQVRLPLLTRLLNTQIYKVDSISYNIQNREWYIPLPSHIMTKG AFLGGADVKECIEAFSSYICPSDPGFVLNHEMESCLSGNISQCPRTTVTSDIVPRYAFVNGGVVANCITTTCTCNGIGNR INQPPDQGVKIITHKECNTIGINGMLFNTNKEGTLAFYTPDDITLNNSVALNPIDISIELNKAKSDLEESKEWIRRSNQK LDSIEDKIEEILSKIYHIENEIARIKKLIGEAEPEA A0A7S5WLM5 Camelid nanobody 1D10 Lama glama 0.012436922 3 Escherichia coli LEVO EVQLVESGGGLVQTGDSLRLSCAASGSIFGENAMAWFRQAPGKQRELVARVSTGGTLFYADFAKVRFTISRDTAKQTVYL QMSSLRPEDTAVYYCAVAVGTRNYWGQGTQVTVSS Camelid nanobody 4C06 Lama glama 0.012487816 3 Escherichia coli LEVO EVQLVESGGGLVQPGGSLRLSCSASGSLSTIKALGWYRRAPGRERELVASITSAGETNYADSAKGRFTVSTDNAKNTVDL RMNSLKPEDTAVYYCYAESFVLNIYWGQGTQVTVSSG singleParticle particle 8.0 ETHANE TFS GLACIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 200 1.0 3.0 FEI FALCON IV (4k x 4k) 50.0 1 3.4 FSC 0.143 CUT-OFF 56650 MAXIMUM LIKELIHOOD MAXIMUM LIKELIHOOD emd_42987.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 320 320 320 0 0 0 320 320 320 300.8 300.8 300.8 90.0 90.0 90.0 X Y Z -0.03330007 1.9704101 0.0011425883 0.02531491 0.93999994 0.93999994 0.93999994 0.095 AUTHOR Final refined volume. DeepEMhancer sharpened. Used to build coordinates. emd_42987_additional_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 320 320 320 0 0 0 320 320 320 300.8 300.8 300.8 90.0 90.0 90.0 X Y Z -1.212411 1.8271012 -0.000114022194 0.037336756 0.93999994 0.93999994 0.93999994 AUTHOR Final refined volume. Sharpened map, not DeepEMhancer sharpened. emd_42987_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 320 320 320 0 0 0 320 320 320 300.8 300.8 300.8 90.0 90.0 90.0 X Y Z -0.2826909 0.5860009 0.00020305904 0.028593121 0.93999994 0.93999994 0.93999994 AUTHOR half map B emd_42987_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 320 320 320 0 0 0 320 320 320 300.8 300.8 300.8 90.0 90.0 90.0 X Y Z -0.25384358 0.6309923 0.00021261713 0.028566197 0.93999994 0.93999994 0.93999994 AUTHOR half map A