2025-12-03 REL RCSB INITIAL_RELEASE REPOSITORY DATABASE_REFERENCES citation citation_author em_admin _citation.country _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.title _citation.year _em_admin.last_update RCSB RCSB 2023-11-14 2024-11-20 2024-11-20 2025-12-03 National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID) AI173104 United States National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID) AI043453 United States HBV T=4 3A mutant capsid from HEK-293T cells Bianchini EN Wang JCY Hu J HBV, Hepatitis B, Capsid, Core Protein, HEK-293T, VIRUS Bianchini EN Perez-Segura C Liu H Luckenbaugh L Flanagan J Cai Y Shanklin J Zlotnick A Hadden-Perilla JA Hu J Wang JCY Cryo-EM Structures of HBV Capsids from Human Cells at Near-Atomic Resolution Structure UK 2025 0969-2126 2005 STRUE6 EMD-42822 other EM volume EMD-42823 other EM volume EMD-42825 other EM volume EMD-42826 other EM volume EMD-42827 other EM volume EMD-42828 other EM volume 8uyv FULLOVERLAP EMDB EMD-42822 other EM volume EMDB EMD-42823 other EM volume EMDB EMD-42825 other EM volume EMDB EMD-42826 other EM volume EMDB EMD-42827 other EM volume EMDB EMD-42828 other EM volume EMDB EMD-42824 associated EM volume Hepatitis B virus Hepatitis B virus 0 1
Recombinant HBV capsid protein was expressed by transfecting HEK-293T cells with a plasmid containing a mutant HBV capsid protein gene.
Hepatitis B virus Homo sapiens 5 capsid protein 340.0 4 VIRUS-LIKE PARTICLE OTHER false true Capsid protein Hepatitis B virus 0.021108254 4 Homo sapiens LEVO MDIDPYKEFGATVELLSFLPSDFFPSVRDLLDTASALYREALESPEHCSPHHTALRQAILCWGELMTLATWVGVNLEDPA SRDLVVSYVNTNMGLKFRQLLWFHISCLTFGRETVIEYLVSFGVWIRTPPAYRPPNAPILSTLPETTVVRRRGRAPRRRT PAPRRRRSQAPRRRRSQSREPQC Q89656 singleParticle particle 7.5
30mM NaCl, 50mM Tris-HCl(pH7.5), 2mM DTT
 ETHANE 100 277 FEI VITROBOT MARK IV
Sample was monodisperse.
 FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 50.0 2.7 0.5 4.5 6400.0 FEI TITAN KRIOS AUTOGRID HOLDER NITROGEN GATAN K3 BIOQUANTUM (6k x 4k) 30.0 1 CTFFIND 4 PHASE FLIPPING AND AMPLITUDE CORRECTION
De novo generated in RELION
 I 2.9 FSC 0.143 CUT-OFF RELION 3.1 33677 MAXIMUM LIKELIHOOD RELION 3.1 MAXIMUM LIKELIHOOD RELION 3.1 emd_42824.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 640 640 640 -319 -319 -319 640 640 640 448.0 448.0 448.0 90.0 90.0 90.0 X Y Z -0.024422556 0.038723033 0.00001273124 0.0021803596 0.7 0.7 0.7 0.005 AUTHOR cryo-em map 1QGT PDB experimental model FLEXIBLE FIT REAL emd_42824_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 640 640 640 0 0 0 640 640 640 448.0 448.0 448.0 90.0 90.0 90.0 X Y Z -0.008276441 0.01353318 0.000012739193 0.0011040588 0.7 0.7 0.7 AUTHOR half 2 emd_42824_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 640 640 640 0 0 0 640 640 640 448.0 448.0 448.0 90.0 90.0 90.0 X Y Z -0.008281312 0.01374657 0.000012723275 0.001101575 0.7 0.7 0.7 AUTHOR half 1