2024-11-13 REL RCSB RCSB RCSB 2023-11-06 2024-05-29 2024-05-29 2024-11-13 Defense Advanced Research Projects Agency (DARPA) HR001119S0092 United States 5-HT2AR bound to Lisuride in complex with a mini-Gq protein and an active-state stabilizing single-chain variable fragment (scFv16) obtained by cryo-electron microscopy (cryoEM) Barros-Alvarez X Kim K Panova O Roth BL Skiniotis G 5-HT2A receptor, serotonin receptor, G protein, GPCR, Lisuride, cryoEM, MEMBRANE PROTEIN Lyu J Kapolka N Gumpper R Alon A Wang L Jain MK Barros-Alvarez X Sakamoto K Kim Y DiBerto J Kim K Glenn IS Tummino TA Huang S Irwin JJ Tarkhanova OO Moroz Y Skiniotis G Kruse AC Shoichet BK Roth BL AlphaFold2 structures guide prospective ligand discovery. Science US 384 eadn6354 eadn6354 2024 38753765 doi:10.1126/science.adn6354 1095-9203 0038 SCIEAS EMD-43630 focused EM volume
Focused refinement map for 5-HT2AR bound to Lisuride obtained by cryoEM
 EMD-43631 focused EM volume
Focused refinement map for mini-Gq protein and an active-state stabilizing single-chain variable fragment (scFv16) obtained by cryoEM.
 8uwl FULLOVERLAP 5-HT2AR bound to Lisuride in complex with heterotrimeric mini-Gq protein and single-chain variable fragment (scFv16) 5-HT2AR bound to Lisuride in complex with heterotrimeric mini-Gq protein and single-chain variable fragment (scFv16) 0 1 2 3 4 5 Homo sapiens 5-hydroxytryptamine receptor 2A Homo sapiens 0.038274285000000005 1 Spodoptera frugiperda LEVO LSLLHLQEKNWSALLTAVVIILTIAGNILVIMAVSLEKKLQNATNYFLMSLAIADMLLGFLVMPVSMLTILYGYRWPLPS KLCAVWIYLDVLFSTASIMHLCAISLDRYVAIQNPIHHSRFNSRTKAFLKIIAVWTISVGISMPIPVFGLQDDSKVFKEG SCLLADDNFVLIGSFVSFFIPLTIMVITYFLTIKSLQKEATLCVSDLGTRAKLASFSFLPQSSLSSEKLFQRSIHREPGS YTGRRTMQSISNEQKACKVLGIVFFLFVVMWCPFFITNIMAVICKESCNEDVIGALLNVFVWIGYLSSAVNPLVYTLFNK TYRSAFSRYIQCQYKENKK P28223 G protein subunit q (Gi2-mini-Gq chimera) Homo sapiens 0.028084831999999997 1 Spodoptera frugiperda LEVO MGSTVSAEDKAAAERSKMIDKNLREDGEKARRTLRLLLLGADNSGKSTIVKQMRILHGGSGGSGGTSGIFETKFQVDKVN FHMFDVGGQRDERRKWIQCFNDVTAIIFVVDSSDYNRLQEALNDFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKI EDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRKEFVDISTASGDGRHICYPHFTCAVDTENARRIFNDCKDIILQMNL REYNLV Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 Homo sapiens 0.03741693 1 Spodoptera frugiperda LEVO MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLI IWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTS SGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGV TDDGMAVATGSWDSFLKIWN P62873 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 Homo sapiens 0.007861143 1 Spodoptera frugiperda LEVO MASNNTASIAQARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLLTPVPASENPFREKKFFCAIL P59768 Single-chain variable fragment 16 (scFv16) Homo sapiens 0.030552233999999998 1 Spodoptera frugiperda LEVO MLLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFADVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPE KGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSG GGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDR FSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK N,N-diethyl-N'-[(8alpha)-6-methyl-9,10-didehydroergolin-8-yl]urea 0.00033844699999999997 1 H8G singleParticle particle 15 7.5 UltrAuFoil R1.2/1.3 ETHANE FEI VITROBOT MARK IV FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 70.0 2.7 0.8 1.8 57050.0 FEI TITAN KRIOS AUTOGRID HOLDER GATAN K3 (6k x 4k) 67.78 1 7RAN C1 2.8 FSC 0.143 CUT-OFF cryoSPARC 133216 ANGULAR RECONSTITUTION cryoSPARC ANGULAR RECONSTITUTION cryoSPARC emd_42676.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 360 360 360 0 0 0 360 360 360 306.756 306.756 306.756 90.0 90.0 90.0 X Y Z -0.27023917 1.1329064 0.0006877542 0.013652759 0.8521 0.8521 0.8521 0.15 AUTHOR Composite map for 5-HT2AR bound to lisuride in complex with a mini-Gq protein and an active-state stabilizing single-chain variable fragment (scFv16) obtained by cryo-electron microscopy emd_42676_additional_3.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 360 360 360 0 0 0 360 360 360 306.756 306.756 306.756 90.0 90.0 90.0 X Y Z -0.30697444 0.60514903 -0.00039268014 0.0127499625 0.8521 0.8521 0.8521 AUTHOR Global refinement map previous to local refinement emd_42676_additional_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 360 360 360 0 0 0 360 360 360 306.756 306.756 306.756 90.0 90.0 90.0 X Y Z -0.7352694 1.3906528 0.00034383492 0.019598098 0.8521 0.8521 0.8521 AUTHOR Local map for mini-Gq protein and an active-state stabilizing single-chain variable fragment (scFv16) obtained by cryo-electron microscopy emd_42676_additional_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 360 360 360 0 0 0 360 360 360 306.756 306.756 306.756 90.0 90.0 90.0 X Y Z -0.45661995 1.1334343 0.0001254862 0.008735111 0.8521 0.8521 0.8521 AUTHOR Local map for 5-HT2AR bound to Lisuride