2026-08-12 REL RCSB INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY EXPERIMENTAL_SUMMARY em_admin _em_admin.last_update REMEDIATION REPOSITORY Metalloprotein remediation STRUCTURE_SUMMARY em_admin pdbx_entry_details pdbx_modification_feature pdbx_nonpoly_atom_coordination pdbx_nonpoly_atom_coordination_sphere pdbx_nonpoly_atom_coordination_sphere_order _em_admin.last_update _pdbx_entry_details.has_protein_modification RCSB RCSB 2023-10-05 2024-06-19 2024-06-19 2026-08-12 National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) 1R35GM142959 United States In-situ structure of typeA supercomplex in respiratory chain ( local refined map focused on CI iron-sulfur cluster regions ) Zheng W Zhang K Zhu J in-situ cryo-EM structure, mammalian, mitochondria, respiratory supercomplex, proton pumping, membrane protein, electron transport Zheng W Chai P Zhu J Zhang K High-resolution in situ structures of mammalian respiratory supercomplexes. Nature UK 631 232 239 2024 38811722 doi:10.1038/s41586-024-07488-9 1476-4687 0006 NATUAS 8ugp FULLOVERLAP EMDB EMD-42231 associated EM volume
In-situ structure of supercomplex in respiratory chain ( 200kV,typeA )
 In-situ structure of typeA supercomplex in respiratory chain ( local refined map focused on CI iron-sulfur cluster regions ) In-situ structure of typeA supercomplex in respiratory chain ( local refined map focused on CI iron-sulfur cluster regions ) 0 1 2 3 4 5 6 7 8 9 10 11 12 Sus scrofa NADH-ubiquinone oxidoreductase chain 3 Sus scrofa 0.012998448 1 LEVO MNIMLTLLTNVTLASLLVLIAFWLPQLNAYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ TNNLKTMLTMALFLLILLAASLAYEWTQKGLEWAE O79880 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial Sus scrofa 0.028500184 1 LEVO MRNVSTQVPVSAHRPSRFGQRPRIPGALQRTDRRGCLKAEAEMAALAASGLLRPILALRSSMGAAVQVRFVHPSAATDSP SSSQPAVSQAGAVVSKPTTLPSSRGEYVVAKLDDLVNWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPR QSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGIL QLQRKIKREKRLRIWYRR A0A4X1VVS8 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial Sus scrofa 0.030154318 1 LEVO MAAAAAARGCWRGLVGPAAVARVSGRPSVLLLPVRKESAAADTRPTIRPRNDVVHKQLSAFGQYVAEILPKYVQQVQVSC FNELEIFIHPDGVIPVLTFLRDHTNAQFKSLADLTAVDVPTRQNRFEIVYNLLSLRFNSQIRVKTYTDELTPIESSVTVY KAANWYEREIWDMFGVFFANHPDLRRILTGYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDLNSPWE AFPAYRQPPEDLKLEAGDKKPETK A0A286ZNN4 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial Sus scrofa 0.054168074 1 LEVO MAALRALCSLRGVAAQVLRPGAGARLPIQPSRGARQWQPDVEWAEQFGGAVMYPTKETAHWKPPPWNGNYYWPNYFPLLS DVDPPKDTLVSNLTLNFGPQHPAAHGVLRLVMELSGEMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMCN EQAYSLAVEKLLNIQPPPRAQWIRVLFGEITRLLNHIMAVTTHALDIGAMTPFFWMFEEREKMFEFYERVSGARMHAAYI RPGGVHQDLPLGLLDDIYEFSKNFSFRIDELEEMLTNNRIWRNRTVDIGVVTAEDALNYGFSGVMLRGSGIQWDLRKTQP YDVYDQVEFDVPIGSRGDCYDRYLCRVEEMRQSLRIISQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTE GYQVPPGATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVVAIIGTQDIVFGEVDR A0A8D0QM68 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial Sus scrofa 0.079627398 1 LEVO MLRIPVTRALIGLSKSPKGCVRTTATAASNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHERLSVAGNCRMCLV EIEKAPKVVAACAMPVMKGWNILTNSEKSKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGSDRSRFLEGKRAV EDKNIGPLVKTIMTRCIQCTRCIRFASEIAGVDDLGTTGRGNDMQVGTYIEKMFMSELSGNIIDICPVGALTSKPYAFTA RPWETRKTESIDVMDAVGSNIVVSTRTGEVMRILPRMHEDINEEWISDKTRFAYDGLKRQRLTQPMIRNEKGLLTYTTWE DALSRVAGMLQSFQGNDVAAIAGGLVDAEALVALKDLLNRVDSDSLCTEEVFPTAGAGTDLRSNYLLNTTIAGVEEADVI LLVGTNPRFEAPLFNARIRKSWLHNDLKVALIGSPVDLTYRYDHLGDSPKILQDIASGNHPFSQILKEAKKPMVVLGSSA LQRSDGTAILAAVSNIAQNIRLSSGVTGDWKVMNILHRIASQVAALDLGYKPGVEAIRKNPPKVLFLLGADGGCITRQDL PKDCFIIYQGHHGDVGAPMADVILPGAAYTEKSATYVNTEGRAQQTKVAVTPPGLAREDWKIIRALSEIAGMTLPYDTLD QVRSRLEEVSPNLVRYDDVEGANYFQQANELSKLVNQQLLADPLVPPQLTIKDFYMTDSISRASQTMAKCVKAVTEGIQA VEEPSIC A0A8D1AAL8 NADH-ubiquinone oxidoreductase chain 1 Sus scrofa 0.035591425999999995 1 LEVO MFMINILSLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADALKLVTKEPLRPGTSSISMFIIAPILGLS LALTMWVPLPMPYPLINMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSY TLSTLITTQEHIWMIFTSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFMAEYANIIMMNAFTAI LFLGASHDPHTPELYTINFVLKTLALTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHISLPIMTASIPPQS A0A0U1RS44 7.1.1.2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial Sus scrofa 0.027135039 1 LEVO MEASQECRLRLSVDRPPPHGKERQRFKMRCLSTPMLLRALAQAQAAHAGHPSARTLHSSAVAATYKFVNMREPSMDMKSV TDRAAQTLLWTELVRGLGMTLSYLFREPATINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAVCPAQAITIEAE PRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELLYNKEKLLNNGDKWEAEIAANIQADYLYR A0A286ZUN9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial Sus scrofa 0.042606324 1 LEVO MAAAVHPRVVRAVPMSRSCLAAVATSVSYGPPQRQLHHALIPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQV IVPYRCEPYDTMHLRPMGDLGQIIFMEWNGKDKDSIRKVVEHSNVVINLVGREWETKNFDFEDVFVKIPHAIAQVSKEAG VEKLIHISHLNADIKSPSRYLRSKAVGEKEVRAAFPEATIIKPSDIFGREDRFLNYFASMRWFGGVPLISLGKETVKQPV YIVDVSKGIINAIKDPDAKGKTFAFVGPNRYLLFDLVQYIFAVAYRPFLPYPLPHFAYRWVGRLFEVSPFEPWTTRDKVE RVHMSDMTLPHLPGLEDLGIQATPLELKAIEVLRRHRTYRWLTSEMEDVKPAKTVNI A0A4X1ULW2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial Sus scrofa 0.019746514 1 LEVO MAAVSMSVALKQALWGRRAAAVGAVSVSKVPTRLLSTSTWRLAQDQTQDTQLIAVDEKLDITTLTGVPEEHIKTRKVRIF VPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWSSTADPLSNLVLTFSTKEDAVAFAEKNGWSFDVEERKVPKPKSKSY GANFSWNKRTRVSTK A0A4X1SN37 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial Sus scrofa 0.01334895 1 LEVO MAAVTFLRLLGRSGAGARNLLGGSRCFGVRTSPTGEKVTHTGQAYDDGDYRRVRFSDRQKEVNENFAIDLIAEQPVSEVG SRVISCDGGGGALGHPRVYINLDKETKTGTCGYCGLQFRQPHH A0A4X1THU2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 Sus scrofa 0.014953313 1 LEVO MAASGLPRAAAAAGTSVKPIFSRDMNEAKRRVRELYRAWYREVPNTVHLFQLDISVKQGRDKVREMFMKNAHVTDPRVVD LLVIKGKMELEETINVWKQRTHIMRFFHETEAPRPTDFLSKFYVGHDP A0A480VKQ8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 Sus scrofa 0.017162438999999998 1 LEVO MELVQVLRRGLQQVSGHGGLRGYLRVLFRANDVRVGTLVGEDKYGNKYYEDNKQFFGRHRWVIYTTEMNGRDTFWDVDGS MVPPEWHRWLHCMTDDPPTTKPPTARKYIWTNHKFNVSGTPQQYVPYSTTRKKIQEWVPPSTPYK A0A4X1SJF2 IRON/SULFUR CLUSTER 0.00035163999999999996 3 SF4 ZINC ION 6.5409e-05 1 ZN singleParticle particle 7.0 ETHANE FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 1.3 3.0 GATAN K3 BIOCONTINUUM (6k x 4k) 50.0 1 PHASE FLIPPING AND AMPLITUDE CORRECTION 2.0 FSC 0.143 CUT-OFF 60000 MAXIMUM LIKELIHOOD MAXIMUM LIKELIHOOD emd_42231.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 260 260 260 0 0 0 260 260 260 108.16 108.16 108.16 90.0 90.0 90.0 X Y Z -1.1929859 1.3692126 0.0010155824 0.067252524 0.416 0.416 0.416 0.07 AUTHOR emd_42231_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 640 640 640 0 0 0 640 640 640 532.48 532.48 532.48 90.0 90.0 90.0 X Y Z -0.57958144 0.8200448 0.00024351788 0.03770424 0.83199996 0.83199996 0.83199996 AUTHOR emd_42231_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 640 640 640 0 0 0 640 640 640 532.48 532.48 532.48 90.0 90.0 90.0 X Y Z -0.538593 0.7587196 0.0002412589 0.03771763 0.83199996 0.83199996 0.83199996 AUTHOR