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    <admin>
        <current_status>
            <date>2024-08-07</date>
            <code>REL</code>
            <processing_site>RCSB</processing_site>
        </current_status>
        <sites>
            <deposition>RCSB</deposition>
            <last_processing>RCSB</last_processing>
        </sites>
        <key_dates>
            <deposition>2023-09-26</deposition>
            <header_release>2024-08-07</header_release>
            <map_release>2024-08-07</map_release>
            <update>2024-08-07</update>
        </key_dates>
        <grant_support>
            <grant_reference>
                <funding_body>David and Lucile Packard Foundation</funding_body>
                <country>United States</country>
            </grant_reference>
            <grant_reference>
                <funding_body>Swiss National Science Foundation</funding_body>
                <code>310030_185325</code>
                <country>Switzerland</country>
            </grant_reference>
            <grant_reference>
                <funding_body>European Research Council (ERC)</funding_body>
                <code>695596</code>
                <country>European Union</country>
            </grant_reference>
            <grant_reference>
                <funding_body>Burroughs Wellcome Fund</funding_body>
                <code>1022785</code>
                <country>United States</country>
            </grant_reference>
        </grant_support>
        <title>Toxoplasma gondii apical end with ICMAP1 conditionally knocked down</title>
        <authors_list>
            <author ORCID="0000-0003-2559-1794">Martinez M</author>
            <author ORCID="0000-0003-1959-194X">Dos Santos Pacheco N</author>
            <author ORCID="0000-0003-2391-473X">Chang Y-W</author>
            <author ORCID="0000-0003-4156-2109">Soldati-Favre D</author>
        </authors_list>
        <keywords>Parasite, Conoid, Microtubules, CELL INVASION</keywords>
    </admin>
    <crossreferences>
        <citation_list>
            <primary_citation>
                <journal_citation published="true">
                    <author ORCID="0000-0003-1959-194X" order="1">Dos Santos Pacheco N</author>
                    <author ORCID="0009-0001-3564-9542" order="2">Tell I Puig A</author>
                    <author ORCID="0000-0001-8307-5099" order="3">Guerin A</author>
                    <author ORCID="0000-0003-2559-1794" order="4">Martinez M</author>
                    <author ORCID="0000-0001-8444-313X" order="5">Maco B</author>
                    <author order="6">Tosetti N</author>
                    <author ORCID="0000-0002-1273-3733" order="7">Delgado-Betancourt E</author>
                    <author ORCID="0000-0002-9338-9929" order="8">Lunghi M</author>
                    <author ORCID="0000-0002-7426-432X" order="9">Striepen B</author>
                    <author ORCID="0000-0003-2391-473X" order="10">Chang YW</author>
                    <author ORCID="0000-0003-4156-2109" order="11">Soldati-Favre D</author>
                    <title>Sustained rhoptry docking and discharge requires Toxoplasma gondii intraconoidal microtubule-associated proteins.</title>
                    <journal_abbreviation>Nat Commun</journal_abbreviation>
                    <country>UK</country>
                    <volume>15</volume>
                    <first_page>379</first_page>
                    <last_page>379</last_page>
                    <year>2024</year>
                    <external_references type="PUBMED">38191574</external_references>
                    <external_references type="DOI">doi:10.1038/s41467-023-44631-y</external_references>
                    <external_references type="ISSN">2041-1723</external_references>
                </journal_citation>
            </primary_citation>
        </citation_list>
        <emdb_list>
            <emdb_reference>
                <emdb_id>EMD-42113</emdb_id>
                <relationship>
                    <other>other EM volume</other>
                </relationship>
                <details>Toxoplasma gondii apical end with Rhoptry Discharge Factor 3 (RDF3) conditionally knocked down</details>
            </emdb_reference>
            <emdb_reference>
                <emdb_id>EMD-42119</emdb_id>
                <relationship>
                    <other>other EM volume</other>
                </relationship>
                <details>Toxoplasma gondii apical end with ICMAP2 confitionally knocked down</details>
            </emdb_reference>
            <emdb_reference>
                <emdb_id>EMD-42120</emdb_id>
                <relationship>
                    <other>other EM volume</other>
                </relationship>
                <details>Toxoplasma gondii apical end with ICMAP3i confitionally knocked down</details>
            </emdb_reference>
            <emdb_reference>
                <emdb_id>EMD-42121</emdb_id>
                <relationship>
                    <other>other EM volume</other>
                </relationship>
                <details>Toxoplasma gondii apical end with ICMAP3ii conditionally knocked down</details>
            </emdb_reference>
        </emdb_list>
    </crossreferences>
    <sample>
        <name>Toxoplasma Gondii tachyzoite apical complex with ICMAP1 conditionally knocked down</name>
        <supramolecule_list>
            <cell_supramolecule supramolecule_id="1">
                <name>Toxoplasma Gondii tachyzoite apical complex with ICMAP1 conditionally knocked down</name>
                <parent>0</parent>
                <natural_source database="NCBI">
                    <organism ncbi="5811">Toxoplasma gondii</organism>
                </natural_source>
            </cell_supramolecule>
        </supramolecule_list>
    </sample>
    <structure_determination_list>
        <structure_determination structure_determination_id="1">
            <method>tomography</method>
            <aggregation_state>cell</aggregation_state>
            <specimen_preparation_list>
                <tomography_preparation preparation_id="1">
                    <buffer>
                        <ph>7.4</ph>
                        <details>DMEM supplemented with 5% fetal bovine serum and 2 mM glutamine</details>
                    </buffer>
                    <vitrification>
                        <cryogen_name>ETHANE-PROPANE</cryogen_name>
                        <chamber_humidity units="percentage">95</chamber_humidity>
                        <chamber_temperature units="K">310</chamber_temperature>
                        <instrument>LEICA EM GP</instrument>
                        <details>Front blot for 4 seconds before plunging. </details>
                    </vitrification>
                    <details>Egressed tachyzoites from a culture of confluent HFF cells. ICMAP1 knockdown induced by treatment with 50 nM rapamycin for 48 hours prior to egress.</details>
                    <fiducial_markers_list>
                        <fiducial_marker>
                            <manufacturer>Ted Pella, Inc</manufacturer>
                            <diameter units="nanometer">10</diameter>
                        </fiducial_marker>
                    </fiducial_markers_list>
                    <sectioning>
                        <other_sectioning>NO SECTIONING</other_sectioning>
                    </sectioning>
                </tomography_preparation>
            </specimen_preparation_list>
            <microscopy_list>
                <tomography_microscopy microscopy_id="1">
                    <microscope>FEI TITAN KRIOS</microscope>
                    <illumination_mode>FLOOD BEAM</illumination_mode>
                    <imaging_mode>BRIGHT FIELD</imaging_mode>
                    <electron_source>FIELD EMISSION GUN</electron_source>
                    <acceleration_voltage units="kV">300</acceleration_voltage>
                    <c2_aperture_diameter units="µm">100.0</c2_aperture_diameter>
                    <nominal_defocus_min units="µm">1.5</nominal_defocus_min>
                    <nominal_defocus_max units="µm">4.0</nominal_defocus_max>
                    <nominal_magnification>33000.0</nominal_magnification>
                    <specimen_holder_model>FEI TITAN KRIOS AUTOGRID HOLDER</specimen_holder_model>
                    <cooling_holder_cryogen>NITROGEN</cooling_holder_cryogen>
                    <specialist_optics>
                        <phase_plate>VOLTA PHASE PLATE</phase_plate>
                        <energy_filter>
                            <name>GIF Bioquantum</name>
                            <slit_width units="eV">20</slit_width>
                        </energy_filter>
                    </specialist_optics>
                    <software_list>
                        <software>
                            <name>SerialEM</name>
                            <version>3.8</version>
                        </software>
                    </software_list>
                    <image_recording_list>
                        <image_recording image_recording_id="1">
                            <film_or_detector_model>GATAN K3 (6k x 4k)</film_or_detector_model>
                            <average_exposure_time units="s">0.4</average_exposure_time>
                            <average_electron_dose_per_image units="e/Å^2">2.3</average_electron_dose_per_image>
                        </image_recording>
                    </image_recording_list>
                </tomography_microscopy>
            </microscopy_list>
            <tomography_processing image_processing_id="1">
                <image_recording_id>1</image_recording_id>
                <details>Raw frames were gain normalized in serialEM and motion corrected using the alignframes command in IMOD</details>
                <final_reconstruction>
                    <algorithm>BACK PROJECTION</algorithm>
                    <software_list>
                        <software>
                            <name>IMOD</name>
                            <version>4.11.5</version>
                        </software>
                    </software_list>
                    <number_images_used>61</number_images_used>
                </final_reconstruction>
            </tomography_processing>
        </structure_determination>
    </structure_determination_list>
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            <space_group>1</space_group>
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        <data_type>IMAGE STORED AS SIGNED INTEGER (2 BYTES)</data_type>
        <dimensions>
            <col>1023</col>
            <row>1440</row>
            <sec>800</sec>
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            <col>209</col>
            <row>-209</row>
            <sec>-401</sec>
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            <x>1023</x>
            <y>1440</y>
            <z>800</z>
        </spacing>
        <cell>
            <a units="Å">10843.801</a>
            <b units="Å">15264.001</b>
            <c units="Å">8480.0</c>
            <alpha units="deg">90.0</alpha>
            <beta units="deg">90.0</beta>
            <gamma units="deg">90.0</gamma>
        </cell>
        <axis_order>
            <fast>X</fast>
            <medium>Y</medium>
            <slow>Z</slow>
        </axis_order>
        <statistics>
            <minimum>-1218.0</minimum>
            <maximum>372.0</maximum>
            <average>56.713875000000002</average>
            <std>32.042476999999998</std>
        </statistics>
        <pixel_spacing>
            <x units="Å">10.6</x>
            <y units="Å">10.6</y>
            <z units="Å">10.6</z>
        </pixel_spacing>
        <contour_list>
            <contour primary="true">
                <source>AUTHOR</source>
            </contour>
        </contour_list>
        <label>::::EMDATABANK.org::::EMD-42118::::</label>
        <annotation_details>Toxoplasma gondii apical end with ICMAP1 conditionally knocked down</annotation_details>
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