2024-10-23 REL RCSB RCSB RCSB 2023-09-02 2023-12-20 2023-12-20 2024-10-23 Not funded Structure of a class A GPCR/agonist complex Sun D Johnson M Masureel M GPCR, agonist, STRUCTURAL PROTEIN Sun D Sun Y Janezic E Zhou T Johnson M Azumaya C Noreng S Chiu C Seki A Arenzana TL Nicoludis JM Shi Y Wang B Ho H Joshi P Tam C Payandeh J Comps-Agrar L Wang J Rutz S Koerber JT Masureel M Structural basis of antibody inhibition and chemokine activation of the human CC chemokine receptor 8. Nat Commun UK 14 7940 7940 2023 38040762 doi:10.1038/s41467-023-43601-8 2041-1723 EMD-41850 consensus EM volume
Structure of a class A GPCR/agonist complex (Consensus map)
 EMD-41828 focused EM volume
Structure of a class A GPCR/agonist complex (focused map1)
 EMD-41827 focused EM volume
Structure of a class A GPCR/agonist complex (focused map2)
 8u1u FULLOVERLAP CCR8 in complex with CCL1 and Gi CCR8 in complex with CCL1 and Gi 0 1 2 3 4 5 Homo sapiens C-C motif chemokine 1,C-C chemokine receptor type 8,EGFP fusion protein Human adenovirus C serotype 2 0.08323668 1 Mammalian expression vector Flag-MCS-pcDNA3.1 LEVO KSMQVPFSRCCFSFCEQEIPLRAILCYRNTSSICSNEGLIFKLKRGKEACALDTVGWVQRHRKMLRHCPSKRKGSGSGSG SGSGSGSGSGSGSGSGSDYTLDLSVTTVTDYYYPDICSSPCDAELIQTNGKLLLAVFYCLLFVFSLLGNSLVILVLVVCK KLRSITDVYLLNLALSDLLFVFSFPFQTYYLLDQWVFGTVMCKVVSGFYYIGFYSSMFFITLMSVDRYLAVVHAVYALKV RTIRMGTTLCLAVWLTAIMATIPLLVFYQVASEDGVLQCYSFYNQQTLKWKIFTNFKMNILGLLIPFTIFMFCYIKILHQ LKRCQNHNKTKAIRLVLIVVIASLLFWVPFNVVLFLTSLHSMHILDGCSISQQLTYATHVTEIISFTHCCVNPVIYAFVG EKFKKHLSEIFQKSCSQIFNYLGRQMPRESCEKSSSCQQHSSRSSSVDYILGGSDYKDDDDKGGSLEVLFQGPMVSKGEE LFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKLICTTGKLPVPWPTLVTTLGYGLQCFARYPDHMKQHDFFKS AMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYITADKQKNGIKANFK IRHNIEDGGVQLADHYQQNTPIGDGPVLLPDNHYLSYQSKLSKDPNEKRDHMVLLEFVTAAGITLGMDELYKGSAWSHPQ FEKGGGSGGGSGGSAWSHPQFEK P22362 P51685 A0A6M5E0N3 Guanine nucleotide-binding protein G(i) subunit alpha-1 Homo sapiens 0.043182078 1 Escherichia coli LEVO MKKHHHHHHHHHHENLYFQGGSMGCTLSAEDKAAVERSKMIDRNLREDGEKAAREVKLLLLGAGESGKSTIVKQMKIIHE AGYSEEECKQYKAVVYSNTIQSIIAIIRAMGRLKIDFGDSARADDARQLFVLAGAAEEGFMTAELAGVIKRLWKDSGVQA CFNRSREYQLNDSAAYYLNDLDRIAQPNYIPTQQDVLRTRVKTTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGV TAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEE AAAYIQCQFEDLNKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIKNNLKDCGLF P63096 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 Homo sapiens 0.039518120999999996 1 Spodoptera frugiperda LEVO MHHHHHHHHGENLYFQGSSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHW GTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHT GYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFT GHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD RAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN P62873 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 Homo sapiens 0.007861143 1 Spodoptera frugiperda LEVO MASNNTASIAQARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLLTPVPASENPFREKKFFCAIL P59768 scFv fragment Mus musculus 0.028124386999999997 1 Spodoptera frugiperda LEVO AGSDVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKN TLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSN GNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKA AAGNSLVPRGSHHHHHHHH 2-acetamido-2-deoxy-beta-D-glucopyranose 0.000221208 1 NAG singleParticle particle 7.5 ETHANE FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 0.8 1.8 FEI FALCON IV (4k x 4k) 40.814 1 3.1 OTHER 201761 OTHER
Ab initio in cryoSPARC
 MAXIMUM LIKELIHOOD emd_41829.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 288 288 288 0 0 0 288 288 288 292.4064 292.4064 292.4064 90.0 90.0 90.0 Z Y X -28.686769999999999 70.167950000000005 0.00664046 1.1446072 1.0153 1.0153 1.0153 8.33 AUTHOR