2025-05-21 REL RCSB INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY EXPERIMENTAL_SUMMARY em_admin em_software _em_admin.last_update _em_software.name DATA_COLLECTION em_admin em_software _em_admin.last_update _em_software.name RCSB RCSB 2023-08-15 2023-11-08 2023-11-08 2025-05-21 National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID) AI120756 United States National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID) AI174908 United States Cryo-EM structure of BG505 SOSIP.664 HIV-1 Env trimer in complex with temsavir, 8ANC195, and 10-1074 Tolbert WD Pozharski E Pazgier M BG505 SOSIP, 8ANC195, 10-1074, BMS-626529, temsavir, VIRAL PROTEIN-INHIBITOR-IMMUNE SYSTEM complex Prevost J Chen Y Zhou F Tolbert WD Gasser R Medjahed H Nayrac M Nguyen DN Gottumukkala S Hessell AJ Rao VB Pozharski E Huang RK Matthies D Finzi A Pazgier M Structure-function analyses reveal key molecular determinants of HIV-1 CRF01_AE resistance to the entry inhibitor temsavir. Nat Commun UK 14 6710 6710 2023 37872202 doi:10.1038/s41467-023-42500-2 2041-1723 8ttw FULLOVERLAP Complex of BG505 SOSIP.664 with temsavir and the antibody Fabs of 8anc195 and 10-1074 Complex of BG505 SOSIP.664 with temsavir and the antibody Fabs of 8anc195 and 10-1074 0 1 2 3 4 5 6
Fab fragments were generated by papain digest of their respective IgGs.
Homo sapiens Envelope glycoprotein gp160 Human immunodeficiency virus 1 0.054064277 3 Homo sapiens LEVO AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIIS LWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKE YRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEV MIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRK HFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQ AMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRR R Q2N0S6 BG505 SOSIP.664 transmembrane protein gp41 Human immunodeficiency virus 1 0.017146481999999998 3 Homo sapiens LEVO AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQ LLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD Q2N0S5 Antibody 8anc195 heavy chain Homo sapiens 0.025324401999999996 3 Homo sapiens LEVO QIHLVQSGTEVKKPGSSVTVSCKAYGVNTFGLYAVNWVRQAPGQSLEYIGQIWRWKSSASHHFRGRVLISAVDLTGSSPP ISSLEIKNLTSDDTAVYFCTTTSTYDRWSGLHHDGVMAFSSWGQGTLISVSAASTKGPSVFPLAPSSKSTSGGTAALGCL VKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKT Antibody 8anc195 light chain Homo sapiens 0.023460046999999998 3 Homo sapiens LEVO DIQMTQSPSTLSASTGDTVRISCRASQSITGNWVAWYQQRPGKAPRLLIYRGAALLGGVPSRFRGSAAGTDFTLTIGNLQ AEDFGTFYCQQYDTYPGTFGQGTKVEVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNS QESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC Antibody 10-1074 heavy chain Homo sapiens 0.025661688 3 Homo sapiens LEVO QVQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSL KLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCL VKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKT Antibody 10-1074 light chain Homo sapiens 0.023180759999999998 3 Homo sapiens LEVO SYVRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGD EADYYCHMWDSRSGFSWSFGGATRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAG VETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS 2-acetamido-2-deoxy-beta-D-glucopyranose 0.000221208 21 NAG 1-[4-(benzenecarbonyl)piperazin-1-yl]-2-[4-methoxy-7-(3-methyl-1H-1,2,4-triazol-1-yl)-1H-pyrrolo[2,3-c]pyridin-3-yl]ethane-1,2-dione 0.000473484 3 83J singleParticle particle 4 7.2 ETHANE FEI VITROBOT MARK IV TFS GLACIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 200 2.7 0.5 2.7 NITROGEN GATAN K3 (6k x 4k) 2.5 43.8 1 cryoSPARC PHASE FLIPPING AND AMPLITUDE CORRECTION 5U7O
5u7o was used as the model for BG505 SOSIP.664 bound to temsavir, 5CJX was used as the model for the 8anc195 fab, and 6orn was used as the model for the 10-1074 fab
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