2024-10-09
REL
RCSB
RCSB
RCSB
2023-07-05
2023-08-09
2023-08-09
2024-10-09
Not funded
HCMV Pentamer in complex with CS2pt1p2_A10L Fab and CS3pt1p4_C1L Fab
Goldsmith JA
McLellan JS
Virus, glycoprotein, antibody, VIRAL PROTEIN
Zehner M
Alt M
Ashurov A
Goldsmith JA
Spies R
Weiler N
Lerma J
Gieselmann L
Stohr D
Gruell H
Schultz EP
Kreer C
Schlachter L
Janicki H
Laib Sampaio K
Stegmann C
Nemetchek MD
Dahling S
Ullrich L
Dittmer U
Witzke O
Koch M
Ryckman BJ
Lotfi R
McLellan JS
Krawczyk A
Sinzger C
Klein F
Single-cell analysis of memory B cells from top neutralizers reveals multiple sites of vulnerability within HCMV Trimer and Pentamer.
Immunity
US
56
2602
2620.e10
2023
37967532
doi:10.1016/j.immuni.2023.10.009
1074-7613
2048
IUNIEH
8tea
FULLOVERLAP
HCMV Pentamer in complex with CS2pt1p2_A10L Fab and CS3pt1p4_C1L Fab
HCMV Pentamer in complex with CS2pt1p2_A10L Fab and CS3pt1p4_C1L Fab
0
1
2
3
7
5
6
4
Human betaherpesvirus 5
Envelope protein UL128
Human betaherpesvirus 5
0.018940903999999998
1
Homo sapiens
LEVO
MEWSWVFLFFLSVTTGVHSEECCEFINVNHPPERCYDFKMCNRFTVALRCPDGEVCYSPEKTAEIRGIVTTMTHSLTRQV
VHNKLTSCNYNPLYLEADGRIRCGKVNDKAQYLLGAAGSVPYRWINLEYDKITRIVGLDQYLESVKKHKRLDVCRAKMGY
MLQ
Q38LY2
Envelope glycoprotein UL130
Human betaherpesvirus 5
0.024018285
1
Homo sapiens
LEVO
MEWSWVFLFFLSVTTGVHSSPWSTLTANQNPSPPWSKLTYSKPHDAATFYCPFLYPSPPRSPLQFSGFQQVSTGPECRNE
TLYLLYNREGQTLVERSSTWVKKVIWYLSGRNQTILQRMPQTASKPSDGNVQISVEDAKIFGAHMVPKQTKLLRFVVNDG
TRYQMCVMKLESWAHVFRDYSVSFQVRLTFTEANNQTYTFCTHPNLIV
A0A0G2TB82
UL131A
Human betaherpesvirus 5
0.015262057
1
Homo sapiens
LEVO
MEWSWVFLFFLSVTTGVHSQCQRETAEKNDYYRVPHYWDACSRALPDQTRYKYVEQLVDLTLNYHYDASHGLDNFDVLKR
INVTEVSLLISDFRRQNRRGGTNKRTTFNAAGSLAPHARSLEFSVRLFAN
Q38M12
CS2pt1p2_A10L Fab light chain
Homo sapiens
0.022850111
1
Homo sapiens
LEVO
QSALTQPPSASGTPGQRVTISCSGSSSNIGSNTVHWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSRSGTSASLAISGLR
SEDEADYYCAAWDDSLNGRVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVK
AGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
CS2pt1p2_A10L Fab heavy chain
Homo sapiens
0.025916252
1
Homo sapiens
LEVO
MEFGLSWVFLVALIKGVQCQVHLEESGGGLVKPGGSLRLSCVASGFSFSDYYMSWIRQAPGKGLEWLSYISPSGSPTSNA
DSMKGRFTISRDNARSSLYLQVHSLRVEDTAVYYCARDNTVFGVVTTPMDHWGQGTLVTVSSASTKGPSVFPLAPSSKST
SGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRV
EPK
CS3pt1p4_C1L Fab heavy chain
Homo sapiens
0.023630592
1
Homo sapiens
LEVO
QVQLVQSGAEVKKPGSSVKVSCKASGGTFTDYALSWVRQAPGQGLEWMGGIIPVLGTPHYAQKFEDRVTIIADESTGTVF
MALSSLRSDDTGMYYCARGVTHPYYYYAMDVWGQGTTITVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVT
VSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
CS3pt1p4_C1L Fab light chain
Homo sapiens
0.023239675999999997
1
Homo sapiens
LEVO
QSALTQPASVSGSPGQSISISCTGTSSDVGAYDYVSWYQQHPGKAPRLIIYDVNKRPSGVPYRFSGSKSGTAASLTISGL
QSEDEAVYYCGSYTSSSAFFYVFGTGTMVTVLRQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSP
VKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
singleParticle
particle
8.0
ETHANE
TFS GLACIOS
FLOOD BEAM
BRIGHT FIELD
FIELD EMISSION GUN
200
0.8
2.2
FEI FALCON IV (4k x 4k)
49.0
1
7LBE
3.4
FSC 0.143 CUT-OFF
71677
RANDOM ASSIGNMENT
MAXIMUM LIKELIHOOD