2024-11-06 REL RCSB RCSB RCSB 2023-06-30 2023-09-27 2023-09-27 2024-11-06 National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) R35 GM147414 United States National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) R01 GM092802 United States The Pew Charitable Trusts United States National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) GM008268-33 United States Howard Hughes Medical Institute (HHMI) United States Integrin alpha-v beta-6 in complex with minibinder B6_BP_dslf Campbell MG Fernandez A Roy A Kraft J Baker D Complex, heterodimer, signaling, ECM-binding, DE NOVO PROTEIN Roy A Shi L Chang A Dong X Fernandez A Kraft JC Li J Le VQ Winegar RV Cherf GM Slocum D Poulson PD Casper GE Vallecillo-Zuniga ML Valdoz JC Miranda MC Bai H Kipnis Y Olshefsky A Priya T Carter L Ravichandran R Chow CM Johnson MR Cheng S Smith M Overed-Sayer C Finch DK Lowe D Bera AK Matute-Bello G Birkland TP DiMaio F Raghu G Cochran JR Stewart LJ Campbell MG Van Ry PM Springer T Baker D De novo design of highly selective miniprotein inhibitors of integrins alpha v beta 6 and alpha v beta 8. Nat Commun UK 14 5660 5660 2023 37704610 doi:10.1038/s41467-023-41272-z 2041-1723 8tcg FULLOVERLAP Ternary complex of integrin heterodimer (alpha-v beta-6) and the de novo minibinder protein B6_BP_dslf Ternary complex of integrin heterodimer (alpha-v beta-6) and the de novo minibinder protein B6_BP_dslf 0 1 2 3
Integrin expressed in expiCHO cells, minibinder expressed in e. coli
Homo sapiens Integrin alpha-V heavy chain Homo sapiens 0.047898004 1 Cricetulus griseus LEVO FNLDVDSPAEYSGPEGSYFGFAVDFFVPSASSRMFLLVGAPKANTTQPGIVEGGQVLKCDWSSTRRCQPIEFDATGNRDY AKDDPLEFKSHQWFGASVRSKQDKILACAPLYHWRTEMKQEREPVGTCFLQDGTKTVEYAPCRSQDIDADGQGFCQGGFS IDFTKADRVLLGGPGSFYWQGQLISDQVAEIVSKYDPNVYSIKYNNQLATRTAQAIFDDSYLGYSVAVGDFNGDGIDDFV SGVPRAARTLGMVYIYDGKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYADVFIGAPLFMDRGSDGKLQEVGQVSVSLQ RASGDFQTTKLNGFEVFARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNAVPSQILEGQWAARSG CPPSFGYSMKGATDIDKNGYPDLIVGAFGVDRAILYRARP P06756 Integrin beta-6 Homo sapiens 0.026948713 1 Cricetulus griseus LEVO DYPVDLYYLMDLSASMDDDLNTIKELGSRLSKEMSKLTSNFRLGFGSFVEKPVSPFVKTTPEEIANPCSSIPYFCLPTFG FKHILPLTNDAERFNEIVKNQKISANIDTPEGGFDAIMQAAVCKEKIGWRNDSLHLLVFVSDADSHFGMDSKLAGIVCPN DGLCHLDSKNEYSMSTVLEYPTIGQLIDKLVQNNVLLIFAVTQEQVHLYENYAKLIPGATVGLLQKDSGNILQLIISAYE EL P18564 Minibinder B6_BP_dslf synthetic construct 0.008415737 1 Escherichia coli LEVO CVVRFVFRGDLAELMLRAVKDHLKKEGPHWNITSTNNGKELVVRGIHESDAKRIAKWVEKRFPRVHTETQCD CALCIUM ION 4.0078e-05 4 CA 2-acetamido-2-deoxy-beta-D-glucopyranose 0.000221208 2 NAG MANGANESE (II) ION 5.4938e-05 3 MN singleParticle particle 7.4 GOLD ETHANE TFS GLACIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 200 1.0 1.8 GATAN K3 (6k x 4k) 50.0 1
Movies were collected in super resolution and gain corrected
3.4 FSC 0.143 CUT-OFF 124715 MAXIMUM LIKELIHOOD MAXIMUM LIKELIHOOD emd_41154.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 352 352 352 0 0 0 352 352 352 394.944 394.944 394.944 90.0 90.0 90.0 X Y Z -0.8497118 1.6965674 0.00016167955 0.02123558 1.122 1.122 1.122 0.3 AUTHOR Integrin alpha-v beta-6 in complex with minibinder B6_BP_dsulf, locally refined, sharpened emd_41154_additional_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 352 352 352 0 0 0 352 352 352 394.944 394.944 394.944 90.0 90.0 90.0 X Y Z -0.2868075 0.88201296 0.000047457524 0.013503218 1.122 1.122 1.122 AUTHOR emd_41154_additional_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 352 352 352 0 0 0 352 352 352 394.944 394.944 394.944 90.0 90.0 90.0 X Y Z -0.44284722 1.1439267 0.0000428841 0.015026296 1.122 1.122 1.122 AUTHOR emd_41154_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 352 352 352 0 0 0 352 352 352 394.944 394.944 394.944 90.0 90.0 90.0 X Y Z -0.6300953 1.3014063 0.00031905886 0.06751276 1.122 1.122 1.122 AUTHOR emd_41154_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 352 352 352 0 0 0 352 352 352 394.944 394.944 394.944 90.0 90.0 90.0 X Y Z -0.57216865 1.3545825 0.00031617045 0.06765379 1.122 1.122 1.122 AUTHOR