2023-06-21 REL RCSB RCSB RCSB 2023-05-02 2023-06-21 2023-06-21 2023-06-21 Not funded Cryogenic electron microscopy map of human plakophilin-3 Gupta J Izard T Rangarajan ES actin cytoskeleton, armadillo, desmosomes, phosphatidylinositol 4, 5-bisphosphate, plasma membrane, plakophilin, CELL ADHESION Gupta J Rangarajan ES Troyanovsky RB Indra I Troyanovsky SM Izard T Plakophilin-3 Binds the Membrane and Filamentous Actin without Bundling F-Actin. Int J Mol Sci CH 24 2023 37298410 doi:10.3390/ijms24119458 1422-0067 EMD-40675 associated EM volume plakophilin-3 plakophilin-3 0 1 Homo sapiens 0.0572 plakophilin-3 Homo sapiens Escherichia coli LEVO HHHHHHHHSSGLEVLFQGPGSHRTLQ RLSSGFDDID LPSAVKYLMA SDPNLQVLGA AYIQHKCYSD AAAKKQARSL QAVPRLVKLF NHANQEVQRH ATGAMRNLIY DNADNKLALV EENGIFELLR TLREQDDELR KNVTGILWNL SSSDHLKDRL ARDTLEQLTD LVLSPLSGAG GPPLIQQNAS EAEIFYNATG FLRNLSSASQ ATRQKMRECH GLVDALVTSI NHALDAGKCE DKSVENAVCV LRNLSYRLYD EMPPSALQRL EGRGRRDLAG APPGEVVGCF TPQSRRLREL PLAADALTFA EVSKDPKGLE WLWSPQIVGL YNRLLQRCEL NRHTTEAAAG ALQNITAGDR RWAGVLSRLA LEQERILNPL LDRVRTADHH QLRSLTGLIR NLSRNARNKD EMSTKVVSHL IEKLPGSVGE KSPPAEVLVN IIAVLNNLVV ASPIAARDLL YFDGLRKLIF IKKKRDSPDS EKSSRAASSL LANLWQYNKL HRDFRAKGYR KEDFLGP singleParticle particle 0.2 7.5
20 mM Tris, 150 mM NaCl, 1 mM DTT
 UltrAuFoil R1.2/1.3 GOLD 300 GOLD HOLEY GLOW DISCHARGE AIR 0.04 ETHANE 95 281 LEICA EM GP JEOL CRYO ARM 300 FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 50.0 2.7 0.8 2.4 60000.0 JEOL CRYOSPECPORTER NITROGEN In-column Omega Filter 20 GATAN K3 (6k x 4k) 60.0 1 AlphaFold FOURIER SPACE 5.03 FSC 0.143 CUT-OFF cryoSPARC 3.3 294650 MAXIMUM LIKELIHOOD cryoSPARC MAXIMUM LIKELIHOOD cryoSPARC 3.3 emd_40675.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 128 128 128 0 0 0 128 128 128 184.32 184.32 184.32 90.0 90.0 90.0 X Y Z -0.98487544 1.696459 0.0006192126 0.04583657 1.44 1.44 1.44 0.202 AUTHOR AlphaFold in silico model FLEXIBLE FIT REAL emd_40675_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 128 128 128 0 0 0 128 128 128 184.32 184.32 184.32 90.0 90.0 90.0 X Y Z -0.34044883 0.63979924 0.0006187433 0.03341481 1.44 1.44 1.44 AUTHOR emd_40675_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 128 128 128 0 0 0 128 128 128 184.32 184.32 184.32 90.0 90.0 90.0 X Y Z -0.3721931 0.64442295 0.000639404 0.033515435 1.44 1.44 1.44 AUTHOR