cytochrome bc1-cbb3 supercomplex from Pseudomonas aeruginosa

2026-08-12 REL RCSB INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY EXPERIMENTAL_SUMMARY em_admin em_software _em_admin.last_update _em_software.name STRUCTURE_SUMMARY em_admin entity _em_admin.last_update _entity.formula_weight REMEDIATION REPOSITORY Metalloprotein remediation STRUCTURE_SUMMARY chem_comp chem_comp_atom chem_comp_bond em_admin entity pdbx_modification_feature pdbx_nonpoly_atom_coordination pdbx_nonpoly_atom_coordination_sphere pdbx_nonpoly_atom_coordination_sphere_order pdbx_validate_chiral _chem_comp.formula _chem_comp.formula_weight _em_admin.last_update _entity.formula_weight RCSB RCSB 2023-04-27 2023-10-11 2023-10-11 2026-08-12 Canadian Institutes of Health Research (CIHR) PJT162186 Canada Canadian Institutes of Health Research (CIHR) PJT451412 Canada cytochrome bc1-cbb3 supercomplex from Pseudomonas aeruginosa Di Trani JM Rubinstein JL Electron transport chain, Supercomplex, Pseudomonas aeruginosa, MEMBRANE PROTEIN Di Trani JM Gheorghita AA Turner M Brzezinski P Adelroth P Vahidi S Howell PL Rubinstein JL Structure of the bc 1 - cbb 3 respiratory supercomplex from Pseudomonas aeruginosa. Proc.Natl.Acad.Sci.USA US 120 e2307093120 e2307093120 2023 37751552 doi:10.1073/pnas.2307093120 1091-6490 0040 PNASA6 8snh FULLOVERLAP EMDB EMD-40625 associated EM volume

cytochrome bc1-cbb3 supercomplex cytochrome bc1-cbb3 supercomplex 0 1 2 3 4 5 6 7 8 Pseudomonas aeruginosa 374 cytochrome-c oxidase Pseudomonas aeruginosa 0.052586527 1 LEVO PAYNYKVVRQFAIMTVVWGVIGMGLGVLIASQLVWPQMNFDLPWTSFGRLRPLHTNLVIFAFGGCALFATSYYTVQRTCQ VRLFSDTLAAFTFWGWQAVAVILLVSLPLGNTTTKEYAEIEFTGAIWLAIVWVAYAVVFFGTLIKRKVKHIYVGNWFFGS FILTTAMLHIVNHMSLPVSWFKSYSMYSGATDAMVQWWYGHNAVGFFLTTGFLGMMYYFVPKQAGRPVYSYRLSIVHFWA LITLYIWAGPHHLHYTALPDWAQSLGMVMSLILLAPSWGGMINGMMTLSGAWHKLRDDPILRFLVVSLAFYGMSTFEGPM MAIKTVNALSHYTDWTIGHVHAGALGWVAMITIGSLYHLIPKVYGVEKMHSVGLINAHFWLATIGTVLYIASLWVNGITQ GLMWRAVNEDGTLTYSFVESLVASHPGFIVRLVGGGFFLTGMLLMSYNTWRTVRQARPEGILAAARMA A0A071LDU2 Ubiquinol-cytochrome c reductase iron-sulfur subunit Pseudomonas aeruginosa 0.020561396 2 LEVO NDGVNAGRRRFLVAATSVVGAAGAVGAAVPFVGSWFPSAKAKAAGAPVQVNVGKIDPGQQIIAEWRGKPVFIVHRTKEML DALPSLEGQLADPDSKASEQPEYVDPKLRSIKPELAVIVGICTHLGCSPTFRPEVAPADLGPDWKGGYFCPCHGSHYDLA GRVYKGQPAPLNLPIPPYTFDADDVITIGVDQEK A0A069Q0N5 Cytochrome b Pseudomonas aeruginosa 0.04611128899999999 2 LEVO MNKFMAWVDARFPATKMWEDHLSKYYAPKNFNFWYFFGSLALLVLVNQILTGIWLTMSFTPSAEEAFASVEYIMRDVDYG WIIRYMHSTGASAFFIVVYLHMFRGLLYGSYQKPRELVWIFGMLIYLALMAEAFMGYLLPWGQMSYWGAQVIISLFGAIP VVGEDLAQWIRGDFLISGITLNRFFALHVIALPIVLLGLVVLHILALHEVGSNNPDGVDIKKKKDENGVPLDGIAFHPYY TVKDIVGVVVFLFIFCTVIFFFPEMGGYFLEKPNFEMANQFKTPEHIAPVWYFTPFYAILRAVPDKLMGVVAMGAAIAVL FVLPWLDRSPVRSIRYKGWLSKLWLVIFAVSFVILGYYGAQAPSPLGTTLSRVCTVLYFAFFILMPFYTRMEKTKPVPER VTG A0A071LG61 Cytochrome c1 Pseudomonas aeruginosa 0.026280209 2 LEVO PQLDHVDIDLTDKAAMQDGARTFANYCMGCHSAKFQRYERVATDLGIPADLMMEKLVFTGAKIGDHMDIGMKPADAKTWF GAAPPDLTLVARVRGTDWLYSYLRSFYEDPKRPWGVNNVIFPNVGMPNVLAPLQGRQVIGCKQVQVVEDGKKQFDPLTGT PLTHEACDQLTVVPKTGELNEAQFDEKVKNLVTFLAYSANPNKLASERIGTYVLLYLAFFFVFAYLLKREYWK A0A069Q767 Cytochrome c4 Pseudomonas aeruginosa 0.018696099999999997 2 LEVO AGDAAAGQAKAAVCGACHGADGNSPAPNFPKLAGQGERYLLKQMHDIKDGKRTVLEMTGLLTNLSDQDLADIAAYFASQK MSVGMADPNLVAQGEALFRGGKIAEGMPACTGCHSPSGVGIATAGFPHLGGQHATYVAKQLTDFREGTRTNDGDTKIMQS IAAKLSNKDIAAISSYIQGLH A0A071L1H9 Cytochrome C5 Pseudomonas aeruginosa 0.013475439 2 LEVO MLAAQAAVLALWAVSAQATTTDDAIAKRLEPVGKVCVQGKECEGVGAVAAAAGGGGARSGEDIVGKTCNTCHGTGLLGAP KVGDKAEWGKRAKEQGGLDGLLAKAISGINAMPPKGTCADCSDDELKAAIKHMSGL A0A211VLT6 Cbb3-type Cytochrome C oxidase subunit II Pseudomonas aeruginosa 0.022417714999999998 1 LEVO MKNHEILEKNVGLLAIFMVIAVSIGGLTQIVPLFFQDVTNTPVEGMKPRTALELEGRDIYIREGCVGCHSQMVRPFRAET ERYGHYSVAGESVWDHPFLWGSKRTGPDLARVGGRYSDDWHRAHLYNPRNVVPESKMPAYPWLVENKLDGKDTATKMEVL RKLGVPYTDEDIAGAREAVKGKTEMDALVAFLQGLGTSIK A0A071L2F4 Cbb3-type cytochrome c oxidase subunit Pseudomonas aeruginosa 0.033460097999999994 1 LEVO MTTFWSLYITALTVGTLIALLWLVFATRKGEAKGTTEKTMGHSYDGIEEYDNPLPKWWFMLYIGTIVFSVGYLVLYPGLG NWKGVLPGYEGGWTQDKQWEREMNIAQEKYGPIFAKYAAMPIEEVAKDEHAMKMGSRMFATYCSICHGSDAKGALGFPNL ADNEWRWGGDPQSIETTILGGRHAIMAAWGDILGEDGVKNVAAYVRTELAGLKLPEGTKADVEAGKQIFSVNCVACHGPE GKGTALVGAPNLTNPGAFIYGSSYAQLQQTIRHGRQGQMPAQEPYLGKEKVHILAAYIYNLSHN A0A069Q965 COPPER (II) ION 6.354599999999999e-05 1 CU CALCIUM ION 4.0078e-05 2 CA PROTOPORPHYRIN IX CONTAINING FE 0.000616487 6 HEM FE2/S2 (INORGANIC) CLUSTER 0.00017581999999999998 2 FES (2R)-2-(methoxymethyl)-4-{[(25R)-spirost-5-en-3beta-yl]oxy}butyl 4-O-alpha-D-glucopyranosyl-beta-D-glucopyranoside 0.0008550599999999999 2 I7Y UBIQUINONE-10 0.0008633429999999999 2 U10 HEME C 0.0006205189999999999 9 HEC singleParticle particle 7.4 ETHANE-PROPANE FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 0.9 2.0 FEI FALCON IV (4k x 4k) 51.0 1 PHASE FLIPPING AND AMPLITUDE CORRECTION 2.7 FSC 0.143 CUT-OFF 48594 MAXIMUM LIKELIHOOD ANGULAR RECONSTITUTION emd_40625.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 332 332 332 0 0 0 332 332 332 341.96 341.96 341.96 90.0 90.0 90.0 X Y Z -7.410755 15.241743 0.001615821 0.18247828 1.03 1.03 1.03 1.24 AUTHOR ::::EMDATABANK.org::::EMD-40625:::: cytochrome bc1-cbb3 supercomplex from Pseudomonas aeruginosa (composite structure) emd_40625_additional_3.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 332 332 332 0 0 0 332 332 332 341.96 341.96 341.96 90.0 90.0 90.0 X Y Z -1.1399457 3.2042856 0.00011880703 0.07169745 1.03 1.03 1.03 AUTHOR ::::EMDATABANK.org::::EMD-40625:::: cytochrome bc1-cbb3 supercomplex from Pseudomonas aeruginosa (Locally refined cytochrome cbb3 with CcoP2 isoform, unsharpened) emd_40625_additional_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 332 332 332 0 0 0 332 332 332 341.96 341.96 341.96 90.0 90.0 90.0 X Y Z -0.24146175 14.073979 0.0025555629 0.14680709 1.03 1.03 1.03 AUTHOR ::::EMDATABANK.org::::EMD-40625:::: cytochrome bc1-cbb3 supercomplex from Pseudomonas aeruginosa (Locally refined cytochrome cbb3 with CcoP2 isoform, locally sharpened) emd_40625_additional_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 332 332 332 0 0 0 332 332 332 341.96 341.96 341.96 90.0 90.0 90.0 X Y Z -4.3848386 9.778688000000001 0.003022284 0.2034756 1.03 1.03 1.03 AUTHOR ::::EMDATABANK.org::::EMD-40625:::: cytochrome bc1-cbb3 supercomplex from Pseudomonas aeruginosa emd_40625_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 332 332 332 0 0 0 332 332 332 341.96 341.96 341.96 90.0 90.0 90.0 X Y Z -1.1540762 4.0478315 0.0048408085 0.14152879 1.03 1.03 1.03 AUTHOR ::::EMDATABANK.org::::EMD-40625:::: cytochrome bc1-cbb3 supercomplex from Pseudomonas aeruginosa (Half map B) emd_40625_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 332 332 332 0 0 0 332 332 332 341.96 341.96 341.96 90.0 90.0 90.0 X Y Z -1.3164673 4.1538806 0.004806654 0.1413589 1.03 1.03 1.03 AUTHOR ::::EMDATABANK.org::::EMD-40625:::: cytochrome bc1-cbb3 supercomplex from Pseudomonas aeruginosa (Half map A)