2025-07-02 REL PDBe INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY EXPERIMENTAL_SUMMARY em_admin em_software _em_admin.last_update _em_software.name OTHER atom_sites _atom_sites.fract_transf_matrix[1][1] _atom_sites.fract_transf_matrix[2][2] _atom_sites.fract_transf_matrix[3][3] REMEDIATION REPOSITORY Carbohydrate remediation STRUCTURE_SUMMARY atom_site chem_comp entity pdbx_branch_scheme pdbx_chem_comp_identifier pdbx_entity_branch pdbx_entity_branch_descriptor pdbx_entity_branch_link pdbx_entity_branch_list pdbx_entity_nonpoly pdbx_nonpoly_scheme pdbx_struct_assembly_gen struct_asym struct_conn struct_site struct_site_gen _atom_site.B_iso_or_equiv _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.label_asym_id _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_entity_id _atom_site.type_symbol _chem_comp.name _chem_comp.type _entity.formula_weight _entity.pdbx_description _entity.pdbx_number_of_molecules _entity.src_method _entity.type _pdbx_struct_assembly_gen.asym_id_list _struct_conn.pdbx_role _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id STRUCTURE_SUMMARY chem_comp chem_comp_atom chem_comp_bond database_2 em_admin pdbx_entry_details pdbx_modification_feature _chem_comp.pdbx_synonyms _database_2.pdbx_DOI _database_2.pdbx_database_accession _em_admin.last_update DATA_COLLECTION em_admin em_software _em_admin.last_update _em_software.name PDBe PDBe 2017-10-26 2017-11-08 2018-04-11 2025-07-02 Swiss National Science Foundation, National Centre of Competence in Research (NCCR) TransCure Switzerland Swiss Federal Institute of Technology Zurich (ETH Zurich) ETH-22-14-1 Switzerland Structure of inhibitor-bound ABCG2 Jackson SM Manolaridis I Multidrug transporter, ABCG2, MZ29, inhibitor, MEMBRANE PROTEIN Jackson SM Manolaridis I Kowal J Zechner M Taylor NMI Bause M Bauer S Bartholomaeus R Bernhardt G Koenig B Buschauer A Stahlberg H Altmann KH Locher KP Structural basis of small-molecule inhibition of human multidrug transporter ABCG2. Nat. Struct. Mol. Biol. US 25 333 340 2018 29610494 doi:10.1038/s41594-018-0049-1 1545-9985 6eti FULLOVERLAP inhibitor-bound ABCG2 inhibitor-bound ABCG2 0 2 3 ABCG2 1 1 HOMO SAPIENS inhibitor 1 2 3 MUS MUSCULUS ATP-binding cassette sub-family G member 2 Homo sapiens 0.072385852 2 Homo sapiens LEVO MSSSNVEVFIPVSQGNTNGFPATASNDLKAFTEGAVLSFHNICYRVKLKSGFLPCRKPVEKEILSNINGIMKPGLNAILG PTGGGKSSLLDVLAARKDPSGLSGDVLINGAPRPANFKCNSGYVVQDDVVMGTLTVRENLQFSAALRLATTMTNHEKNER INRVIQELGLDKVADSKVGTQFIRGVSGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIF SIHQPRYSIFKLFDSLTLLASGRLMFHGPAQEALGYFESAGYHCEAYNNPADFFLDIINGDSTAVALNREEDFKATEIIE PSKQDKPLIEKLAEIYVNSSFYKETKAELHQLSGGEKKKKITVFKEISYTTSFCHQLRWVSKRSFKNLLGNPQASIAQII VTVVLGLVIGAIYFGLKNDSTGIQNRAGVLFFLTTNQCFSSVSAVELFVVEKKLFIHEYISGYYRVSSYFLGKLLSDLLP MRMLPSIIFTCIVYFMLGLKPKADAFFVMMFTLMMVAYSASSMALAIAAGQSVVSVATLLMTICFVFMMIFSGLLVNLTT IASWLSWLQYFSIPRYGFTALQHNEFLGQNFCPGLNATGNNPCNYATCTGEEYLVKQGIDLSPWGLWKNHVALACMIVIF LTIAYLKLLFLKKYS Q9UNQ0 5D3(Fab) light chain variable domain Mus musculus 0.023594016
The variable domain of the light chain of 5D3(Fab)
2 Mus musculus LEVO DIVLTQSPSSFSVSLGDRVTISCKASGYILNRLAWYQQKPGNAPRLLISGATSLETGFPSRFSGTGSGKDYTLSISSLQT EDVGTYYCQQYWSTPWTFGGGTKLEIRRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVL NSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC 5D3(Fab) heavy chain variable domain Mus musculus 0.023843633
The variable domain of the heavy chain of 5D3(Fab)
2 Mus musculus LEVO QVQLQESGPGLVKPSQSLSLTCTVTGFSITSDYAWNWIRQFPGKKLEWMGYINFDGGTTYNPSLRGRISITRDTSKNQFF LQLRSVTPEDTATYYCATFYGAKGTLDYWGQGTSVTVSSAKTTPPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTW NSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRGP ~{tert}-butyl 3-[(2~{S},5~{S},8~{S})-14-cyclopentyloxy-2-(2-methylpropyl)-4,7-bis(oxidanylidene)-3,6,17-triazatetracyclo[8.7.0.0^{3,8}.0^{11,16}]heptadeca-1(10),11,13,15-tetraen-5-yl]propanoate 0.000523664 2 BWQ singleParticle particle 0.4 7.5 Quantifoil R1.2/1.3 COPPER 300 GLOW DISCHARGE ETHANE-PROPANE 100 277 FEI VITROBOT MARK IV FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 GATAN K2 SUMMIT (4k x 4k) 4094 0.2 2.0 1 PHASE FLIPPING AND AMPLITUDE CORRECTION
5NJ3
 3.1 FSC 0.143 CUT-OFF RELION 284831 PROJECTION MATCHING PROJECTION MATCHING emd_3953.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 384 384 384 0 0 0 384 384 384 322.56 322.56 322.56 90.0 90.0 90.0 X Y Z -0.16035369 0.29498184 -0.0000047451895 0.005259065 0.84 0.84 0.84 0.038 AUTHOR The local-resolution filtered map of ABCG2-MZ29-Fab 98.0 emd_3953_additional_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 384 384 384 0 0 0 384 384 384 322.56 322.56 322.56 90.0 90.0 90.0 X Y Z -0.16072826 0.27887657 0.00043866824 0.0053286776 0.84 0.84 0.84 AUTHOR The post-processed map of ABCG2-MZ29-Fab