2026-02-04 REL PDBj PDBj PDBj 2024-03-17 2024-04-10 2024-04-10 2026-02-04 Not funded 2.08A Apoferritin Structure Solved Using an Indirect Scintillator-Coupled CMOS Detector at 300 kV Aramaki S Yoshida Y Tanihara T Oyama K Otsuki K Terada Y Matsunaga N Ohdo S Mayanagi K apoferritin, ferritin, METAL BINDING PROTEIN Aramaki S Tanihara T Yoshida Y Matsunaga N Ohdo S Mayanagi K High-Resolution single particle analysis using a scintillator camera XF416 on CRYOARM300II at 300 kV. J.Struct.Biol. US 218 108286 108286 2026 41491063 doi:10.1016/j.jsb.2026.108286 1095-8657 0803 JSBIEM EMDB EMD-39481 associated EM volume apoferritin apoferritin 0 Mus musculus 0.440 singleParticle particle 11 7.5 18.0 C8H18N2O4S HEPES 272.0 NaCl sodium chloride 1.0 C4H10O2S2 DTT Quantifoil COPPER 200 CARBON HOLEY ARRAY GLOW DISCHARGE AIR ETHANE 100 277.15 FEI VITROBOT MARK IV JEOL CRYO ARM 300 SPOT SCAN BRIGHT FIELD FIELD EMISSION GUN 300 50.0 2.7 0.2 1.5 200000.0 JEOL CRYOSPECPORTER NITROGEN OTHER In-column Omega Filter 20 OTHER 4096 4096 1 1893 2.3 92.9
TVIPS TemCam-XF416 (4k x 4k)
 1 353902 CTFFIND 4.1.14 PHASE FLIPPING AND AMPLITUDE CORRECTION
from 3D initial reference process in RELION
 O 2.08 FSC 0.143 CUT-OFF RELION 5.0-beta 173658 MAXIMUM LIKELIHOOD RELION 5.0-beta MAXIMUM LIKELIHOOD RELION 5.0-beta emd_39481.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 180 180 180 0 0 0 180 180 180 153.216 153.216 153.216 90.0 90.0 90.0 X Y Z -0.07437848 0.1794563 0.0017000005 0.0146129215 0.85120004 0.85120004 0.85120004 0.04 AUTHOR FSC-weighted, shapened and masked map by PostProcess. emd_39481_msk_1.map emd_39481_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 180 180 180 0 0 0 180 180 180 153.216 153.216 153.216 90.0 90.0 90.0 X Y Z -0.0069523915 0.036302406 0.00092469866 0.005464775 0.85120004 0.85120004 0.85120004 AUTHOR emd_39481_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 180 180 180 0 0 0 180 180 180 153.216 153.216 153.216 90.0 90.0 90.0 X Y Z -0.0082802195 0.03705847 0.0009245371 0.0054658344 0.85120004 0.85120004 0.85120004 AUTHOR