2025-09-17 REL PDBj INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY PDBj PDBj 2024-03-11 2025-09-17 2025-09-17 2025-09-17 Japan Agency for Medical Research and Development (AMED) JP17am0101093 Japan Japan Agency for Medical Research and Development (AMED) JP20ae0101047 Japan Japan Agency for Medical Research and Development (AMED) JP21fk0108463 Japan Japan Agency for Medical Research and Development (AMED) JP22ama121037 Japan Japan Agency for Medical Research and Development (AMED) JP223fa627005 Japan Japan Agency for Medical Research and Development (AMED) JP23ama121001 Japan Japan Science and Technology JPMJCR20H8 Japan Ministry of Education, Culture, Sports, Science and Technology (Japan) JP20H05873 Japan Electron cryotomography of SARS-CoV-2 active virions Dokainish HM Maenaka K virions, spike protein, VIRUS Dokainish HM Fukuhara H Maenaka K Unprecedented spike flexibility revealed by BSL3 Cryo-ET of active SARS-CoV-2 virions To Be Published 0353 EMDB EMD-39421 associated EM volume Severe acute respiratory syndrome coronavirus 2 Severe acute respiratory syndrome coronavirus 2 0 Severe acute respiratory syndrome coronavirus 2 Wuhan VeroE6/TMPRSS2 VIRION STRAIN true false tomography particle 7.4
Opti-MEM
 Quantifoil R1.2/1.3 COPPER 200 GLOW DISCHARGE ETHANE 90 291 LEICA EM GP NO SECTIONING TFS KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 2.7 0.2 0.2 64000.0 FEI TITAN KRIOS AUTOGRID HOLDER NITROGEN VOLTA PHASE PLATE TFS Selectris FEI FALCON IV (4k x 4k) 4096 4096 0.73 1.5 1 BACK PROJECTION 7.53 IMOD 12.35 121 IMOD 12.35 PHASE FLIPPING AND AMPLITUDE CORRECTION emd_39421.map.gz 1 IMAGE STORED AS SIGNED INTEGER (2 BYTES) 1024 1024 318 0 -159 0 1024 1024 318 7714.816 7714.816 2395.812 90.0 90.0 90.0 X Y Z -877.0 707.0 150.223559999999992 37.28454 7.534 7.534 7.534 AUTHOR emd_39421_additional_1.map.gz 1 IMAGE STORED AS SIGNED INTEGER (2 BYTES) 1024 1024 302 0 -151 0 1024 1024 302 7714.816 7714.816 2275.268 90.0 90.0 90.0 X Y Z -969.0 876.0 148.355099999999993 34.438685999999997 7.534 7.534 7.5340004 AUTHOR emd_39421_additional_2.map.gz 1 IMAGE STORED AS SIGNED INTEGER (2 BYTES) 1024 1024 234 0 -117 0 1024 1024 234 7714.816 7714.816 1762.9559 90.0 90.0 90.0 X Y Z -930.0 686.0 148.749709999999993 44.402940000000001 7.534 7.534 7.534 AUTHOR emd_39421_additional_3.map.gz 1 IMAGE STORED AS SIGNED INTEGER (2 BYTES) 1024 1024 280 0 -140 0 1024 1024 280 7714.816 7714.816 2109.52 90.0 90.0 90.0 X Y Z -893.0 794.0 148.395569999999992 40.126716999999999 7.534 7.534 7.534 AUTHOR emd_39421_additional_4.map.gz 1 IMAGE STORED AS SIGNED INTEGER (2 BYTES) 1024 1024 270 0 -135 0 1024 1024 270 7714.816 7714.816 2034.1799 90.0 90.0 90.0 X Y Z -857.0 751.0 148.821030000000007 38.070990000000002 7.534 7.534 7.534 AUTHOR emd_39421_additional_5.map.gz 1 IMAGE STORED AS SIGNED INTEGER (2 BYTES) 1024 1024 288 0 -144 0 1024 1024 288 7714.816 7714.816 2169.792 90.0 90.0 90.0 X Y Z -666.0 640.0 147.958480000000009 36.109904999999998 7.534 7.534 7.534 AUTHOR emd_39421_additional_6.map.gz 1 IMAGE STORED AS SIGNED INTEGER (2 BYTES) 1024 1024 234 0 -117 0 1024 1024 234 7714.816 7714.816 1762.9559 90.0 90.0 90.0 X Y Z -959.0 1053.0 147.932899999999989 40.001877 7.534 7.534 7.534 AUTHOR emd_39421_additional_7.map.gz 1 IMAGE STORED AS SIGNED INTEGER (2 BYTES) 1024 1024 269 0 -135 0 1024 1024 269 7714.816 7714.816 2026.646 90.0 90.0 90.0 X Y Z -902.0 679.0 149.335880000000003 33.529986999999998 7.534 7.534 7.534 AUTHOR emd_39421_additional_8.map.gz 1 IMAGE STORED AS SIGNED INTEGER (2 BYTES) 1024 1024 280 0 -140 0 1024 1024 280 7714.816 7714.816 2109.52 90.0 90.0 90.0 X Y Z -381.0 419.0 8.822050000000001 16.108967 7.534 7.534 7.534 AUTHOR emd_39421_additional_9.map.gz 1 IMAGE STORED AS SIGNED INTEGER (2 BYTES) 1024 1024 247 0 -124 0 1024 1024 247 7714.816 7714.816 1860.898 90.0 90.0 90.0 X Y Z -678.0 647.0 147.990620000000007 33.022644 7.534 7.534 7.534 AUTHOR emd_39421_additional_10.map.gz 1 IMAGE STORED AS SIGNED INTEGER (2 BYTES) 1024 1024 253 0 -127 0 1024 1024 253 7714.816 7714.816 1906.1019 90.0 90.0 90.0 X Y Z -739.0 919.0 147.021710000000013 37.772125000000003 7.534 7.534 7.534 AUTHOR emd_39421_additional_11.map.gz 1 IMAGE STORED AS SIGNED INTEGER (2 BYTES) 1024 1024 260 0 -130 0 1024 1024 260 7714.816 7714.816 1958.84 90.0 90.0 90.0 X Y Z -626.0 848.0 146.825420000000008 38.216037999999998 7.534 7.534 7.534 AUTHOR emd_39421_additional_12.map.gz 1 IMAGE STORED AS SIGNED INTEGER (2 BYTES) 1024 1024 292 0 -146 0 1024 1024 292 7714.816 7714.816 2199.928 90.0 90.0 90.0 X Y Z -811.0 933.0 147.111369999999994 45.270949999999999 7.534 7.534 7.534 AUTHOR