2019-12-04 REL PDBe PDBe PDBe 2017-09-13 2017-11-22 2017-11-22 2019-12-04 European Research Council ERC-CoG-648432 MEMBRANEFUSION Germany German Research Foundation Sonderforschungsbereich 1021 Germany European Molecular Biology Organization ALTF 748-2014 Germany Cryo-electron tomogram of Marburg virus Wan W Kolesnikova L Clarke M Koehler A Noda T Becker S Briggs JAG Wan W Kolesnikova L Clarke M Koehler A Noda T Becker S Briggs JAG Structure and assembly of the Ebola virus nucleocapsid. Nature UK 551 394 397 2017 29144446 doi:10.1038/nature24490 1476-4687 0006 NATUAS EMD-3875 other EM volume
The structure of Marburg virus nucleocapsid from virions
 EMD-3876 associated EM volume
Model of the Ebola virus nucleocapsid subunit from recombinant virus-like particles
 Lake Victoria marburgvirus - Popp Lake Victoria marburgvirus - Popp 0 1 2 3
Virus was isolated from infected Huh-7 cells. Purified viruses were fixed with paraformaldehyde.
Lake Victoria marburgvirus - Popp VIRION STRAIN true false tomography helicalArray 7.4
Virus was purified into Dulbecco's modified Eagle's medium (DMEM) with 4% paraformaldehyde
 C-flat 2/1 3C COPPER 300 CARBON HOLEY 20.0 GLOW DISCHARGE AIR 0.039 ETHANE 95 FEI VITROBOT MARK II
UMC Utrecht 10 NO SECTIONING FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 50.0 2.7 2.0 4.5 81000.0 FEI TITAN KRIOS AUTOGRID HOLDER NITROGEN GIF Quantum LS -10 10 GATAN K2 QUANTUM (4k x 4k) SUPER-RESOLUTION 3708 3708 1-5 1.0 2.9 1
Frames were aligned using K2Align software, based off the MotionCorr algorithm. Tomograms were reconstructed with IMOD, using stripwise CTF-correction and weighted back projection.
BACK PROJECTION IMOD 41 CTFFIND 4 defocus determination CTFPHASEFLIP CTF-correction
CTF amplitude correction was performed during the wedge-weighted subtomogram averaging step.
 emd_3876.map.gz 1 IMAGE STORED AS SIGNED INTEGER (2 BYTES) 927 927 250 0 0 70 927 927 250 6600.2397 6600.2397 1780.0 90.0 90.0 90.0 X Y Z -33 33 1.9209514 2.2230742 7.12 7.12 7.12 AUTHOR A 4x binned representative tomogram of intact Marburg virus virions