2017-08-02 REL PDBe PDBe PDBe 2017-05-25 2017-07-26 2017-07-26 2017-08-02 Pronase-treated straight filament in Alzheimer's disease brain Fitzpatrick AWP Falcon B He S Murzin AG Murshudov G Garringer HG Crowther RA Ghetti B Goedert M Scheres SHW Fitzpatrick AWP Falcon B He S Murzin AG Murshudov G Garringer HJ Crowther RA Ghetti B Goedert M Scheres SHW Cryo-EM structures of tau filaments from Alzheimer's disease. Nature UK 547 185 190 2017 28678775 doi:10.1038/nature23002 1476-4687 0006 NATUAS EMD-3744 associated EM volume
Pronase-treated straight filament in Alzheimer's disease brain
 Tau Tau 0 1 Homo sapiens Tau Human LEVO VQIVYKPVDLSKVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDRVQSKIGSLDNITHVPGGGNKKIETHKLTF helical tissue 1.0 7.4
20 mM Tris-HCl pH 7.4 containing 100 MM NaCl
 Quanitifoil Au R1.2/1.3 GOLD 300 GLOW DISCHARGE ETHANE 100 277.15 FEI VITROBOT MARK IV
Sarkosyl-insoluble material was extracted from grey matter of frontal and temporal cortex from the patients brain and treated with pronase, as described in the Methods section of the paper.
FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 70.0 2.7 0.9 0.9 3.0 3.0 FEI TITAN KRIOS AUTOGRID HOLDER NITROGEN GIF Quantum -10 10 GATAN K2 QUANTUM (4k x 4k) SUPER-RESOLUTION 3710 3710 2-20 1 523 0.8 2.5
images were collected in movie-mode at 1.2 frames per second
 1 1 4.78 -1.01 C1 4.9 FSC 0.143 CUT-OFF 8627 Gctf 9273 RELION 2.0 Initial models were reconstructed from 2D class averages of segments that were extracted in a box that was large enough to almost comprise an entire pitch length. NOT APPLICABLE RELION 2.0 emd_3744.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 270 270 270 0 0 0 270 270 270 310.5 310.5 310.5 90.0 90.0 90.0 X Y Z -0.011788864 0.046356678 0.00036828752 0.0024246783 1.15 1.15 1.15 0.012 AUTHOR 2RNM A 226-242 AB INITIO MODEL
Fourier-space refinement of the complete atomic model against the paired helical filament and straight filament maps was performed in REFMAC. A stack of three consecutive monomers from each of the protofilaments was refined to preserve nearest-neighbour interactions for the middle chain.
Fourier shell correlation RECIPROCAL 79. emd_3744_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 270 270 270 0 0 0 270 270 270 297.00006 297.00006 297.00006 90.0 90.0 90.0 X Y Z -0.006496195 0.023459684 0.0008134547 0.0021878046 1.1000003 1.1000003 1.1000003 emd_3744_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 270 270 270 0 0 0 270 270 270 297.00006 297.00006 297.00006 90.0 90.0 90.0 X Y Z -0.006378486 0.022266226 0.00081641687 0.0022043285 1.1000003 1.1000003 1.1000003