2024-11-13 REL PDBj PDBj PDBj 2023-07-15 2024-05-01 2024-05-01 2024-11-13 Chinese Academy of Sciences XDB0490000 China Nipah virus Attachment glycoprotein with 41-6 antibody fragment Sun MM Nipah virus, Attachment glycoprotein, tetramer complex, Neutralizing antibody, VIRAL PROTEIN, VIRAL PROTEIN-IMMUNE SYSTEM complex Chen L Sun M Zhang H Zhang X Yao Y Li M Li K Fan P Zhang H Qin Y Zhang Z Li E Chen Z Guan W Li S Yu C Zhang K Gong R Chiu S Potent human neutralizing antibodies against Nipah virus derived from two ancestral antibody heavy chains. Nat Commun UK 15 2987 2987 2024 38582870 doi:10.1038/s41467-024-47213-8 2041-1723 8k3c FULLOVERLAP Cryo-EM structure of complex of attachment glycoprotein G with 41-6 Fab fragment Cryo-EM structure of complex of attachment glycoprotein G with 41-6 Fab fragment 0 1 2 3 Henipavirus nipahense Light chain of 41-6 Fab fragment Homo sapiens 0.022844219 1 Escherichia coli LEVO QSVVTQPPSVSAAPGQKVTISCSGSSSNIGTNHLSWYQQVPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSASLAISGLQ SEDEADYYCATWDDSLHAWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVK AGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS Heavy chain of 41-6 Fab fragments Homo sapiens 0.025312263999999998 1 Escherichia coli LEVO EVQLVQSGGGLVQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLY LQMNSLRAEDTAVYYCARDREDIVVVPAPRGYYYYYYMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLV KDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTS Glycoprotein G Henipavirus nipahense 0.052941188 2 Homo sapiens LEVO ISQSTASINENVNEKCKFTLPPLKIHECNISCPNPLPFREYRPQTEGVSNLVGLPNNICLQKTSNQILKPKLISYTLPVV GQSGTCITDPLLAMDEGYFAYSHLERIGSCSRGVSKQRIIGVGEVLDRGDEVPSLFMTNVWTPPNPNTVYHCSAVYNNEF YYVLCAVSTVGDPILNSTYWSGSLMMTRLAVKPKSNGGGYNQHQLALRSIEKGRYDKVMPYGPSGIKQGDTLYFPAVGFL VRTEFKYNDSNCPITKCQYSKPENCRLSMGIRPNSHYILRSGLLKYNLSDGENPKVVFIEISDQRLSIGSPSKIYDSLGQ PVFYQASFSWDTMIKFGDVLTVNPLVVNWRNNTVISRPGQSQCPRFNTCPEICWEGVYNDAFLIDRINWISAGVFLDSNQ TAENPVFTVFKDNEILYRAQLASEDTNAQKTITNCFLLKNKIWCISLVEIYDTGDNVIRPKLFAVKIPEQC Q9IH62 singleParticle particle 0.16 8.0 Quantifoil R2/1 COPPER 200 ETHANE FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 2.7 2.0 3.2 105000.0 GATAN K3 (6k x 4k) 4092 5760 9103 3.0 51.0 1 879898 7TXZ 2.88 FSC 0.143 CUT-OFF 299497 MAXIMUM LIKELIHOOD MAXIMUM LIKELIHOOD emd_36849.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 512 512 512 0 0 0 512 512 512 419.84 419.84 419.84 90.0 90.0 90.0 X Y Z -1.7599602 2.282065 0.0000062933864 0.031134028 0.82 0.82 0.82 0.12 AUTHOR emd_36849_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 512 512 512 0 0 0 512 512 512 419.84 419.84 419.84 90.0 90.0 90.0 X Y Z -0.49598742 0.819387 0.00016957206 0.055630993 0.82 0.82 0.82 AUTHOR emd_36849_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 512 512 512 0 0 0 512 512 512 419.84 419.84 419.84 90.0 90.0 90.0 X Y Z -0.5136869 0.7814757 0.00017101566 0.055723656 0.82 0.82 0.82 AUTHOR