PIC-Mediator in complex with +1 nucleosome (T50N)

2022-10-19 REL PDBj PDBj PDBj 2022-09-02 2022-10-12 2022-10-12 2022-10-19 Not funded PIC-Mediator in complex with +1 nucleosome (T50N) Chen X Wang X Liu W Ren Y Qu X Li J Yin X Xu Y Chen X Wang X Liu W Ren Y Qu X Li J Yin X Xu Y Structures of +1 nucleosome-bound PIC-Mediator complex. Science US 378 62 68 2022 36201575 doi:10.1126/science.abn8131 1095-9203 0038 SCIEAS EMD-34215 associated EM volume EMD-33867 other EM volume

PIC-Mediator (MED26-mut) in complex with +1 nucleosome (T40N)

EMD-33885 other EM volume

PIC-Mediator (MED19-mut) in complex with +1 nucleosome (T40N)

EMD-33886 other EM volume

PIC-Mediator (MED19-MED26 double mutant) in complex with +1 nucleosome (T40N)

EMD-34255 other EM volume

PIC-Mediator (p52-mut) in complex with +1 nucleosome (T40N)

EMD-34256 other EM volume

PIC-Mediator in complex with +1 H2A-containing nucleosome (T40N)

EMD-34257 other EM volume

PIC-Mediator in complex with +1 nucleosome (T70N)

EMD-34359 other EM volume

PIC-Mediator in complex with +1 nucleosome (T40N) in MH-binding state

EMD-34360 other EM volume

PIC-Mediator in complex with +1 nucleosome (T40N) in H-binding state

PIC, Mediator, transcription initiation, +1 nucleosome PIC, Mediator, transcription initiation, +1 nucleosome 0 Sus scrofa Homo sapiens singleParticle particle 7.9 ETHANE FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 1.5 2.5 GATAN K3 (6k x 4k) 50.0 1 9.12 FSC 0.143 CUT-OFF 15415 OTHER MAXIMUM LIKELIHOOD emd_34215.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 280 280 280 0 0 0 280 280 280 616.0 616.0 616.0 90.0 90.0 90.0 X Y Z -0.017706698 0.044865694 -9.458065e-05 0.0036432922 2.2 2.2 2.2 0.009 AUTHOR ::::EMDATABANK.org::::EMD-34215:::: PIC-Mediator in complex with plus 1 nucleosome (T50N) emd_34215_additional_11.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 280 280 280 0 0 0 280 280 280 616.0 616.0 616.0 90.0 90.0 90.0 X Y Z -0.033009686 0.16289304 2.9413715e-05 0.0052997833 2.2 2.2 2.2 AUTHOR ::::EMDATABANK.org::::EMD-34215:::: PIC core of the T50N-bound PIC-Mediator emd_34215_additional_10.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 280 280 280 0 0 0 280 280 280 616.0 616.0 616.0 90.0 90.0 90.0 X Y Z -0.01806967 0.05223205 -5.7665715e-05 0.00379854 2.2 2.2 2.2 AUTHOR ::::EMDATABANK.org::::EMD-34215:::: PIC-Mediator in complex with plus 1 nucleosome (T50N) in M-binding state emd_34215_additional_9.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 280 280 280 0 0 0 280 280 280 616.0 616.0 616.0 90.0 90.0 90.0 X Y Z -0.020208545 0.05471305 4.400094e-05 0.0028720342 2.2 2.2 2.2 AUTHOR ::::EMDATABANK.org::::EMD-34215:::: Nucleosome of PIC-Mediator in complex with plus 1 nucleosome (T50N) in M-binding state emd_34215_additional_8.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 280 280 280 0 0 0 280 280 280 616.0 616.0 616.0 90.0 90.0 90.0 X Y Z -0.020413328 0.056071326 -6.851576e-05 0.0026334464 2.2 2.2 2.2 AUTHOR ::::EMDATABANK.org::::EMD-34215:::: Nucleosome of PIC-Mediator in complex with plus 1 nucleosome (T50N) in MH-binding state emd_34215_additional_7.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 280 280 280 0 0 0 280 280 280 616.0 616.0 616.0 90.0 90.0 90.0 X Y Z -0.008690467 0.03164077 2.557718e-05 0.0015124828 2.2 2.2 2.2 AUTHOR ::::EMDATABANK.org::::EMD-34215:::: Mediator of the T50N-bound PIC-Mediator emd_34215_additional_6.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 280 280 280 0 0 0 280 280 280 616.0 616.0 616.0 90.0 90.0 90.0 X Y Z -0.02755638 0.13784 0.00022935946 0.004579906 2.2 2.2 2.2 AUTHOR ::::EMDATABANK.org::::EMD-34215:::: TFIIH of the T50N-bound PIC-Mediator emd_34215_additional_5.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 280 280 280 0 0 0 280 280 280 616.0 616.0 616.0 90.0 90.0 90.0 X Y Z -0.024837049 0.12443193 0.00026792736 0.004636382 2.2 2.2 2.2 AUTHOR ::::EMDATABANK.org::::EMD-34215:::: TFIID of the T50N-bound PIC-Mediator emd_34215_additional_4.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 280 280 280 0 0 0 280 280 280 616.0 616.0 616.0 90.0 90.0 90.0 X Y Z -0.01892689 0.043534644 -0.00015951713 0.0038002664 2.2 2.2 2.2 AUTHOR ::::EMDATABANK.org::::EMD-34215:::: PIC-Mediator in complex with plus 1 nucleosome (T50N) in H-binding state emd_34215_additional_3.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 280 280 280 0 0 0 280 280 280 616.0 616.0 616.0 90.0 90.0 90.0 X Y Z -0.01765151 0.042373896 -3.0465244e-05 0.003680205 2.2 2.2 2.2 AUTHOR ::::EMDATABANK.org::::EMD-34215:::: PIC-Mediator in complex with plus 1 nucleosome (T50N) in D (detached) state emd_34215_additional_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 280 280 280 0 0 0 280 280 280 616.0 616.0 616.0 90.0 90.0 90.0 X Y Z -0.022392744 0.04656882 1.6163069e-05 0.0027646131 2.2 2.2 2.2 AUTHOR ::::EMDATABANK.org::::EMD-34215:::: Nucleosome of PIC-Mediator in complex with plus 1 nucleosome (T50N) in D (detached) state emd_34215_additional_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 280 280 280 0 0 0 280 280 280 616.0 616.0 616.0 90.0 90.0 90.0 X Y Z -0.020785902 0.04869011 -2.0446314e-05 0.002911685 2.2 2.2 2.2 AUTHOR ::::EMDATABANK.org::::EMD-34215:::: Nucleosome of PIC-Mediator in complex with plus 1 nucleosome (T50N) in H-binding state emd_34215_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 280 280 280 0 0 0 280 280 280 616.0 616.0 616.0 90.0 90.0 90.0 X Y Z -0.042986434 0.07473137 1.0153209e-05 0.005397446 2.2 2.2 2.2 AUTHOR ::::EMDATABANK.org::::EMD-34215:::: emd_34215_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 280 280 280 0 0 0 280 280 280 616.0 616.0 616.0 90.0 90.0 90.0 X Y Z -0.04256647 0.07930848 -0.00014216501 0.0053419154 2.2 2.2 2.2 AUTHOR ::::EMDATABANK.org::::EMD-34215::::