REL PDBe PDBe PDBe 2016-03-16 2016-03-23 2016-07-13 2018-06-06 Negative-stain electron microscopy structure of human cytomegalovirus gHgLgO trimer Kabanova A Marcandalli J Zhou T Bianchi S Baxa U Tsybovsky Y Lilleri D Silacci-Fregni C Foglierini M Fernandez-Rodriguez BM Druz A Zhang B Geiger R Pagani M Sallusto F Kwong PD Corti D Lanzavecchia A Perez L gHgLgO, human cytomegalovirus Kabanova A Marcandalli J Zhou T Bianchi S Baxa U Tsybovsky Y Lilleri D Silacci-Fregni C Foglierini M Fernandez-Rodriguez BM Druz A Zhang B Geiger R Pagani M Sallusto F Kwong PD Corti D Lanzavecchia A Perez L Platelet-derived growth factor-alpha receptor is the cellular receptor for human cytomegalovirus gHgLgO trimer Nature Microbiology 2016 16082 2016 27573107 doi:10.1038/nmicrobiol.2016.82 Human cytomegalovirus gHgLgO trimer Human cytomegalovirus gHgLgO trimer Heterotrimer (one gH + one gL + one gO) 3 0.39 0.17 Size exclusion chromatography Envelope glycoprotein H Human herpesvirus 5 VR1814 HCMV 0.085 1 Heterotrimeric with gL and gO true Chinese Hamster Ovary cells CHO K1SV PEE.12.4 and PEE6.4 D2K4W8 GO:0016020 GO:0016021 GO:0019031 IPR003493 Envelope glycoprotein O Human herpesvirus 5 VR1814 HCMV 0.054 1 Heterotrimeric with gL and gH true Chinese Hamster Ovary cells CHO K1SV PEE.12.4 and PEE6.4 Q8BCU3 GO:0019031 IPR012564 Envelope glycoprotein L Human herpesvirus 5 VR1814 HCMV 0.03 1 Heterotrimeric with gH and gO true Chinese Hamster Ovary cells CHO K1SV PEE.12.4 and PEE6.4 A8T7J6 GO:0016032 GO:0019031 IPR002689 singleParticle particle 0.01 7.5
20 mM HEPES, 150 mM NaCl
 NEGATIVE
The complex was adsorbed to freshly glow-discharged carbon-coated grids for 15 s, washed with a buffer containing 20 mM HEPES, pH 7.5, and 150 mM NaCl, and stained in several drops of 0.7% uranyl formate
200 mesh copper grid with carbon support, glow discharged
 NONE OTHER FEI TECNAI 20 FLOOD BEAM BRIGHT FIELD LAB6 200 2.0 0.4 0.9 100000.0 SIDE ENTRY, EUCENTRIC Objective lens astigmatism was corrected at 100,000 times magnification 2015-06-18 FEI EAGLE (2k x 2k) 304 Room temperature
The dataset was subjected to iterative stable alignment and clustering (ISAC) in SPARX. The ISAC classes were then used to generate an initial 3D map in EMAN2, which was used as the initial model for three-dimensional reconstruction and refinement using reference projections in SPIDER.
Each defocus group
 C1 OTHER 19.3 OTHER SPARX, EMAN2, SPIDER 10356 37 emd_3391.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 160 160 160 0 0 0 160 160 160 355.2 355.2 355.2 90.0 90.0 90.0 X Y Z -0.03685422 0.09676909 -0.00000286 0.00604573 2.22 2.22 2.22 0.027 AUTHOR The correct handedness for this complex was unknown at the time of deposition
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