REL PDBe PDBe PDBe 2016-03-02 2016-04-06 2016-07-20 2017-07-26 electron density map of murine leukaemia virus envelope glycoprotein tagged in the proline rich region with YFP as reconstructed by subtomogram averaging on viruses produced in DFJ8 cells Riedel C Vasishtan D Siebert CA Whittle C Lehmann MJ Mothes W Grunewald K murine leukemia virus, retrovirus, envelope glycoprotein, cryo electron tomography, subtomogram averaging Riedel C Vasishtan D Siebert CA Whittle C Lehmann MJ Mothes W Grunewald K Native structure of a retroviral envelope protein and its conformational change upon interaction with the target cell. J.STRUCT.BIOL. 197 172 180 2017 27345930 doi:10.1016/j.jsb.2016.06.017 murine leukemia virus Env protein, tagged in the proline rich region with YFP, on murine leukemia virus particles murine leukemia virus Env protein, tagged in the proline rich region with YFP, on murine leukemia virus particles
purified virus particles produced in DFJ8 cells
trimer 1 0.437 murine leukemia virus Env protein Murine leukemia virus Friend's murine leukemia virus 0.437
tagged in the proline rich region with YFP, imaged on intact virus particles
3 trimer false subtomogramAveraging particle 7.4
DMEM + 10% FSC
C-flat copper grids (Protochips, CF-2/1-2C)
 ETHANE-PROPANE MIXTURE OTHER manually blotted for 3sec FEI POLARA 300 FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 1.5 5.0 95000.0 OTHER Gatan QUANTUM 964 postcolumn energy filter 0.0 20.0 2014-08-13 GATAN K2 SUMMIT (4k x 4k) 60 -45 45
particles were picked manually
C3 20.0 OTHER motioncorr, IMOD, TomoCTF, PEET
Images were aligned using motioncorr. Tomograms were reconstructed using weighted back projection. CTF correction was performed employing TomoCTF. PEET was used for the generation of the subtomogram average.
2241 emd_3357.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 60 60 60 0 0 0 60 60 60 276.0 276.0 276.0 90.0 90.0 90.0 X Y Z -0.02051544 15.44012833 7.0263629 1.63033259 4.6 4.6 4.6 9.199999999999999 AUTHOR reconstruction of virus bound murine leukemia virus Env tagged in the proline rich region with YFP
::::EMDATABANK.org::::EMD-3357::::
 1aol A RIGID BODY FIT Chimera REAL
emd_3357.tif
emd_3357_fsc.xml