2024-10-30 REL PDBj PDBj PDBj 2022-06-02 2023-01-11 2023-01-11 2024-10-30 Chinese Academy of Sciences YSBR-015 China National Natural Science Foundation of China (NSFC) 31925024 China Chinese Academy of Sciences XDB37020101 China Ministry of Science and Technology (MoST, China) 2017YFA0503702 China Cryo-EM structure of TOC-TIC supercomplex from Chlamydomonas reinhardtii Liu H Li AJ Liu ZF Complex, membrane protein, TRANSLOCASE Liu H Li A Rochaix JD Liu Z Architecture of chloroplast TOC-TIC translocon supercomplex. Nature UK 615 349 357 2023 36702157 doi:10.1038/s41586-023-05744-y 1476-4687 0006 NATUAS 7xzi FULLOVERLAP a membrane protein complex a membrane protein complex 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 Chlamydomonas reinhardtii 0.812 Ctap3 Chlamydomonas reinhardtii 0.051982613 1 LEVO MADGPSPIRIVLWNDGGESLAAGVEDEEQQQVLHSFADLVGSAIDAVLELPQFRHVEAVTAEAEEDEPGLSIGFDAGSGD GEVDIDNLKGRLDIAGLLLGSAQLPEELAEVAAVEVTDEEEGTTELQFTDEGLVQQLQAVVKRAKLEKRYNDWVAGVAES LGPALDAAAGGVEVTEMPVDPYDVLQAVVAQLIRVAGVSPPAPSLFSRTGALVGGVLGAPRSAVRQVTKRLGRAQRLWWR LEDVVVDGSKLALRLAVKAARPVLVGFVLHRVLKTLDRSRQLEYRLARMGPEEAREAYYEAVLGKDWKQQLQADWDKALE DVDAGLVTDEINHEKRLMTAAQLRRLEVEEWDKQRMKNFYLASFGGLRWFDQMEQALHNPLFIESRGWTDPVQNWVGQNR TYMDDLPAGQYMAGVGNAAIRIKEAELKRKLTDVERAHVLARGGAVAGGLLPQQPTDPATLAVAVGGAFVPSVAGKR A0A2K3D4W3 Ctap4 Chlamydomonas reinhardtii 0.039025082 1 LEVO MGASQESELDFVPRLSFLPIEWRSIGSAFGLKDKSGAAANGRATFTVRQGVDAAELTSTGRVIDGQADVGASLKLNTLAI GVSASNITFHSGLDDPTAAAAQRSSLIPSLKLTAAKQFKRDNYIAVSYDLKHQKPELSACWTGEAGADRATLLVNVDPVM RSVKLAAAVRTPGPEWRKVLYNDETDLLEYPADDGARHTLYVQHEVRGRDLLHATRLGCRLDLGRLVNYVVDFVDYRIEE NIPSFVWNVPLLPQLYSLLVPADNDEQVRHRITGWELDVSHDFARSGLLPVVAISKTSKKLLGGGTLTASYDAAAREAGV SLSRKGVSVGARVARAEGAAGGLSAGWGRPSIHVAVEPLGLLQ A8J6H7 Ctap5 Chlamydomonas reinhardtii 0.042710965 1 LEVO MQLGQLRQPLRACQDQRLTRGVPLARRQLVVVSNWNPLGGKGGGNAEQPGGEEPIQDELLKLLRGGWVLLSNLALFLVFS SFLHRSLNWFVQTELLVAVGAPQQAGERVVGKFFEAIEWVERNILGWKLPGDEEAEDATSKVYEVLQNYTPAEAAYSFAQ LKYKDLTHKERELFHKAYALRHFERRDGRPGDVDAAELQAVKDRLDPLEADRRAYAAAKAAGRLDEYWAAPGREATYQRI VGAPRIAARQCEMASMLKGLQAVLPAMELLAQLQVAQFVYAASKASKSRQQDDFKLQLQTFYGNVLDEQCQLRCMLLNVQ LPMALVTVFVPQYCFCLLDRVVLPRRECGSASTLGSLLRACGRPGSACHAGGCSAQRRDPLTI Toc75 Chlamydomonas reinhardtii 0.087333289 1 LEVO MQGLKATPGLRASSGRPTLRTARTALVVRAHASQPSSSNHAEQQECSSSGSGVSVNQPSALGRLGKFGLSSALSAFVLVP NFGGFGGNGGNRGGGGGGGGGGGSGGQGQPDGGLPLPLYELAEESSDEKEKQQKDDKRNWKNLVTDSEDLEEKPGERSGT NRCVEIVIEGWPDVGNLPTADELKDLLTVQEGHIFEKQDLLDDRRKLEIQYEDYIAEVEIRTEYVDGKSNHQRVVYKFTP HQFRGINAIDIKGAALMPASEVERICNECLPKQPYMVDIAVMDKVRNRIEQWYQSRGLPFCYVGFFDGMDDGILRANVTE AKIDNVSVRFVRPKLTGDSELEYSVYDEGKVVKADKIIEASGFQRGHHYHVEDGYDAMNSIFACGLLEDINIEPEQDPSD VNKINVKIRCEEVQPKSMELDLDWSFQLKNGIPSINRQSLIPGGSVEVSHENLFGNSESATLSLSASDWRNPSADLGFSV AYSEPFYKPHTTRNAQLFNTRKTSTIFTPGGESEVPPVFVDRFGLKGWTSQITGQDNKVEHALMLQLVSTLDENGQVVAK GTKVQRGYYADNGPPTTNSGNGRDLSLSYQGFFALDNVRFINGNQLGERMLFQVDQGLNPSISLPGGRKLGLSGGIYNRA TASYTKFLEAPFLPKLTTEQLWKERKAPNTVVLHAKAGNALGDVAAYDYFSLGGPYSVRGYSHGEIGAARRFLELATEVR VPLKNYGLPGTAYGFVEYATDLGSGRELNGNPTEYYRKPGRGMSYGLGLKALGACRFEYARDCNAGTGTFLVNFGERF A8IE32 Toc90 Chlamydomonas reinhardtii 0.102415258 1 LEVO MGGGLPPKRSEVAESQPASSASSSAAAPAPAAETAGPKLPPRPAGLGLGGAGLLPSRGAAAAPSAGSATGTPAAAASSSL QQQQQQPAPPATQPAAHAAPAAPAGLGGAGLKPMLPPRPAAAAGAGAAGAAAAKPTPAPAPAAAPVPAAAPPPRPAMPNP AAGMSLPPRPVVAAAPPVLAAAGSDAVVDPSEDRRVQRVQRIAHDTRVRLIRAASRLGLAPRTDQVAQFLQAIERSERMV GAQHYKGSRRVDLLAAAEREARLAEEREGAAAEAVAGLRVKILVLGMTGTGKTELINSLLNRPAGSRTNAFREATRRVRV VRGDHNGIPLTFIDTPGLHASASRTADNRAILRAVRAAYRWHKPDYVFYVDRLDATRPGFGEMGLLGLITESLGAGVWRN TMAVLTHAHAARTAFGGQYDVNSRQRRNIVSQLLRQAAGDQQSRNPVFLADCHPACPTNSLGQPVILEGPTAVPWKQQLL VQLVGYKSYNVATSAFKDLAKAKAGKAAAGAAGGARGPQDIFKQMMRSRLPPMTFFVEQMSEGVLKPEGWATMETVAGLG EEVTEDEGAESFNHVYYRQMYELAVAGDPWAQREYAAMLRAYDKGCESYRASYEEADVDANVEYGVESYVVDPIDFGPSF DPEDMYSHRHAYAEAADAGVTVIPSQDYYGPEHDDPLNGIVFQYEAQPFSRHGWGGVPFDLTVCCEKDKTSLCLQGETHV SLVHSVPPFGPRHITQVTGSWEVLRPNIKDVMYQLEVDTFKDGLLGKSDHAGCGLMLARLGEGGDPRKGPTAVGVRLQDT LRVGPFKLEACASKVAVQGPTGGKEEGWGARAFVGYDWLPGLGMAFDFIQERTPEEGGKRLRGYGANFTYDWEALGAAFG MEVDYVAASESVFVSVNAFSGNDYRLGWLLLLPAVNYFKETVSSLWARLRGAGGGEGEEGEELEEEGEGEEGDDEEAMMM MAQEGDL A0A2K3CR90 Tic214 Chlamydomonas reinhardtii 0.232535719 1 LEVO MITFTFMSLVTSVKDYVEITHKLIEIEPLKNYTEFGAVFTYFIFSIGEFFKNFFSFSFLNNIWSIPIIIPDIASAMISEV SVLDGYFHNAFTFLETSVNTTTNPSLVIFEKFVIGIINSLFLILPTSTSHLITLRRFVMQGLEAGYMAGLGTLAGNFLWL ASIILGWRFFVIPWLSLDIFRYLLGFVLLVKYIWDSSKERRMALEDLSKWKIFLLNFLLALTEQSCIYPFISNLSFGPDA SILEGFPVDNYPQFLLIHGAYLLGILFGSFSLLQFTCWFWENPAFSIYLWITTKSSLKISTSSYYKILNFTFLYATMLCA IASIPYYGLDYTITNPIGLVPQDRILNQKKSQSDPDKLITETAFLNLNPTDKNSRIRDGVHARRERWKQRLIKYQAFDAS TYDQGVYDFLTIEDLNYGFDRFWLRRKMRNHQIRFRLFPGPWMRSLKKQLNNPANPSLETSTKAASGPRVEFFRILFEQF YHPNFHDRAAMQTNPAEARNKFISTSPLASTESKKALNSTFSLGNINNSSTGIEGLVLTNTQATLLPTDLQTKRTIKPGL IYTNSALRKFVRNVNTRLNLKLLNSKETNLTTKYKSQFIYSKRWKSIFSKIQPLQNGTTRKSYQLFRNVAKQILVTPDAK SLKLITINQKLSLKERKLLELRTQYNNNSTLTTTAPLTLVRPLNVYLQKEEAFKRKLRYYGTMPMRKLTVGNQAPYFKAL MKRGFYYYKPTLRWRKTLYVASLRRGFRKKSRKQRILVMPSNQQNFNNTLDNTKTNINQNNLANPLGGNEVPMYGADGEN SLITKPTHSYTVLGKRASRYRHQIYKDVLQHWYYTPFNRLLMKFDVDAFINRQPKSHFLTKNEERALHIRRFLLSEHYDT LRWYTYMQHYKTMKTNIGGTKSFANRAYNQQFQGTFKKIRHLFAITPKQGDFYTLKFDQPLYNDNKLKDNLYFHEELLTD YYNGTNLQTNQTSNISVNSTTTFIDNSLRTTQLPVPSSSFDIVNQSSTLIGLTTMQNALRKNVVESTLTSLNSDGEAATS QPKLNFVYSELFVKLIKECKKRIHDQTFLKNYITHRIEKREQLNQEQTKELNKRLEKLKVWLNSDKGSISKLQNTPVQDP NISSPDKVLTTAMQKAVNESISLSGIMPSDKIKTTYGNLTNAYTIKTENAILTKLNVINQLTNNETTTQKNTLIKSIGVN KIQTVLQTIITNFKSSLYNQTQLLRVKTDKDLQWWRTKQRVITKRKSARKRDRFKKQIAVVNKKLAALSKKVETEKSNLY QTLYGNYEISDYLLRNVPTGSSAVIDSTVLRKKQDNQAYLPKETNNVQFNSFVDSNNNVWQTFFAKKLRKKISSKGRRYR SLSLARYLTATRKPRLVGLDNLTKIDNITTLQGAFITKEEKQDSLNLTIQRKQELTNSLKKSQIKKRSRHSWKKRSRHQF SRNHYKYRKRHTHGNGKLRVMNKKLKKFKATNELRQWWWNSFLPRYLSNLQVNNSTLTNKNVSFKPLSNTNSVPSTNMAS PTTSRNLLDNLNSSNQISTSASMNQNIVTESVKVETNQVYLPEGEKSFDITSMTTTLPFYAGWDESLKKFVVTNRLLSRR DAGLSVNNNPQEINFTNPPIQGLNEGSFLYWQTEMPFNSYNIDQFITTNQSFYAPLGWRRFEFRHSILKTWVNNTKAGNN NIKKKTLIISLKNLQPLKSSQQKQNQIKTKKLVARRIKKRYKLLKQMPNQLMYSPTGPLLTEVLPSHYISVFDQQYRLPR NRYLKRNPLKTLKKTTLLALMDSSKQTNGVNKEFTLRKRVKPRRKYHRKRFIKKDGLIFPRRTKFNTNTTLTGNALITNN VNSIEEDDLRWRPSSRTKQKRKDNTRSSAASKTKSNKRVKTNPLRLRQLRRREFQQVLKPLQRYIPQNGGFTWPGDYLRL EIVEMPKLKSINIKKTSLKQKINVQPVGIMPRKYLIEKHNIKVLKKKLSQAYSTQQLTKVVQEYKNLIQNSPPAI P36495 Protein TIC 20 Chlamydomonas reinhardtii 0.02954548 1 LEVO MSALLSQASGFSGLALGSSASSKRLCKPLCRRPAVCVQAAHRPASAVSSGVPSTGFGPVSPLQRRPTLPTRKLVVASSQS GGRAEDAEKQDWKFGRNEGPMTWPWKLMCAILYMLPWVDVTEKTVYFVERFPAFVWTEYFSEPFEHWYNIHEYAPLFIFF ATYLGIVRNKKIPHVARYHVMMGVMLDIVAMILIVTEENLPTGVLWTPWSDLFYALMFWFIFLLVIYCLFFCFLGWYCEI PLISEGVYLQIEQAEQLGQ A8IZ79 Tic15 Chlamydomonas reinhardtii 0.014662775999999999 1 LEVO MDEEPPFNLALNVYKGPASIPHASAEVFGAFFLATNTALLAHMFPGKLFGSELHVRKWDPDYLASCCNEQGMRREALSGK KPNLWLLGGGPRLVNDSWERMWWNNLHWKRWKVPRTGPAFPQDMYWQ A8J1J3 Simp3 Chlamydomonas reinhardtii 0.02118565 1 LEVO MATCAAVSLATAVFQVAAKYVNKARDAVASALPSPSNIDGVQQDWRQQVKELKKHTRVLGFVLPLAKAFAAESLTSVYAR TFERAAFGFAKMYLFCLFMRVLLSWFPSIDWNSQPWAFLRLITEPYLQIYRGILPPLFGQLDFTPLFGFLILQDVVELMS PVYTLGHAKDTSMFWTTTDIMCYFDGH A0A2K3E0K3 Tic100 Chlamydomonas reinhardtii 0.105817695 1 LEVO MASKKGTDAPAALTDPLKEDPTVIRDEAQFPEPSLYFKVFESEAGEPEAKIRADVNKLYDRWIEKYGRRWPEDGINTEDM VWLAEEANKRKRAKPRPRGTVAAEKTEYEDEFMPDPTVGAPVSAADAAKAARRAKKDRKKKKAAGGAEQPAGPRTNYEKT VAGGKWVTDEFESADYEAGNLEKLWDMYLWDREGKPTMMPDTPAAQQEGEESEDFDDFYTAYRPRDVDSEEAREAVWATD EFESDEDNTESEWAPEYVGAGLGLVAEDPLNPQYSLRHSNHPLAPFPGEPLKWASYVYPDFTTFEGLSKQSIPHGMGVMT FGTGTGAGFAMSQTRYGDKYEGEFQAGYAHGLGQFTSEASGEVYIGEFFAGQRHGCGMTLDMKPYFYLLERGVDPVEAYR RTAGAIMKNVEVRTWYRGNKLGDAKEDEVVEINVLKDELDDPFEIALRNSLHDAKLRKWKAMSPQDKAMDRIVSIIERVQ RRNPGRFGAYYREDEKGRVRPVLDSDGADTDFDSVDMIQGVDTDGDLGPGWEGATDSEENPMDPRIRELMAAEGMDDKLE DEGFKDTVLGSAIINPYTGLDMKTYLDGKERHQAELVSVYKASREGRKYLNKVRKDKGGAAKDDESSYVEDDAASGHPGA LLSREAEDDRLARLYEQAGVSKEDERRVEGLAARWRRLLAADEEEVLGGAVGAFRRPGNPLAANDSDTGFETESDMMEMC DIPEILGTVQEARQIVERARMWRFKPYGEVGLRMAQDANGSPVSLMQEPLHYPHGTKFMAPGPLGLCHAVPDDPSLRQEM AKVAHNYAAIYRMYNFDWDPEPGTVQYKIDQRIRRAQELRNNAMARYLAAADEVLRDGAAPAGEGDQALLLASTSTGAPE AFDGQGNASGSGSSSALSSRGGSMFASMTLSRPAPMAGVVSLGRAARVVLGAFADAAKSVPMARPRLARPSGRRQ A0A2K3DQY7 Tic56 Chlamydomonas reinhardtii 0.028046526999999998 1 LEVO MSEPGAGPSDGQVVTRKIRLHKVMRPLDESSPSSQEQHMDRRLAEILPAIADLPVPGPSGAGGSPADARAVEMRRLRGTQ QELAQMEAMELATLFDMSKPHPLDNAAPATPWKGELRPVPRKIVLSPYQYEMINYQRMLMRKNIWYYRDRMNVPRGPCPL HVVKEAWVSGIVDENTLFWGHGLYDWLPAKNIKLLLPMVRTPEVRFATWIKRTFSLKPSLNRIREQRKEHRDPQEASLQV ELMR A8J6R5 Toc34 Chlamydomonas reinhardtii 0.044598612999999995 1 LEVO MAQPPRPAEEYDDDVQEDEDELKEGELDDDESHEAASEGGEAAAGDEEAEDDEQDEEDGDEDSQPWAGLNRLPERDDMLD ILNELRAEGRKQLTVLLLGKSSVGKSSLINSLLGEAVVRVQAFKLQADTDITTTVVRQVAVGNSEVDGFRLKLIDTCGLE DPEAGDTVNLGALSKIAEDVRGVGIDVVLYCDRLDLYRVDPLDKAIIDAISSTFGRGIWRRTVVALTHANLVQTPPGTDY DSFVNGRVRLIRGAVRGPLFFRPSLPVALVENSETCPVSSESGFRVLPDGEPWLVALVSQLVDMAAARRRPYKYHPRLSS KPSHRFRWLLPVAIAAEVLFYRRFLHPRLDDNQRRVEREEERVWALRGQQRRALGLHRPHRPDKDAAWRLEQMYDDD A8HYJ1 3.6.5.- Simp2 Chlamydomonas reinhardtii 0.013426157999999999 1 LEVO MSSDVQAKLSGLLGDIGVKCTLAFAGTVAAGAAIVVPSGKQVEAASLDIYGRPPSQLLPNERRAAEFAAGHRRWKGFVDN SIYSWTRTLPGHDNPIVNPYKGPRRPQRPQQKLEEEVEAAAKQE A8J5D4 Unknown peptide Chlamydomonas reinhardtii 0.0018630769999999999
Chain X belongs to an unidentified protein, which contains an alpha helix. The input sequence is a tentative one based on the model. The identity of this chain remains to be revealed in the future.
1 LEVO AAAAAFAAFAGFAFAAFAAAG Digitonin 0.0012293119999999998 5 AJP 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE 0.0007871579999999999 5 LMG HEXADECANE 0.000226441 1 R16 DODECANE 0.000170335 7 D12 INOSITOL HEXAKISPHOSPHATE 0.0006600349999999999 1 IHP 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE 0.00072297 5 LHG singleParticle particle 7.5 50.0 C4H11NO3 Tris 150.0 NaCl Sodium chloride 0.06 C56H92O29 Digitonin Quantifoil CARBON CONTINUOUS 2.0 PLASMA CLEANING ETHANE 100 FEI VITROBOT MARK IV FEI TITAN KRIOS OTHER BRIGHT FIELD FIELD EMISSION GUN 300 1.5 1.8 GATAN K2 QUANTUM (4k x 4k) SUPER-RESOLUTION 50.0 1 1 2.77 FSC 0.143 CUT-OFF 796731 NOT APPLICABLE NOT APPLICABLE emd_33528.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 640 640 640 0 0 0 640 640 640 432.0 432.0 432.0 90.0 90.0 90.0 X Y Z -0.3870784 0.9564988 0.00051257527 0.023445338 0.675 0.675 0.675 0.15 AUTHOR AB INITIO MODEL REAL emd_33528_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 640 640 640 0 0 0 640 640 640 432.0 432.0 432.0 90.0 90.0 90.0 X Y Z -0.6273116 1.2805448 0.0010263319 0.07232856 0.675 0.675 0.675 AUTHOR emd_33528_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 640 640 640 0 0 0 640 640 640 432.0 432.0 432.0 90.0 90.0 90.0 X Y Z -0.7346522 1.2479639 0.0010389428 0.07217785 0.675 0.675 0.675 AUTHOR