REL PDBe PDBe PDBe 2015-10-22 2015-11-04 2015-12-16 2016-02-17 Negative stain structure of the Rix1-Ipi1dN50-Ipi3 complex Barrio-Garcia C Thoms M Flemming D Kater L Berninghausen O Bassler J Beckmann R Hurt E ribosome, ribosome biogenesis, ribosome assembly, pre-60S, 5S RNP, assembly intermediate, negative-stain, Rix1 complex, Rix1, Ipi1, Ipi3 Barrio-Garcia C Thoms M Flemming D Kater L Berninghausen O Bassler J Beckmann R Hurt E Architecture of the Rix1-Rea1 checkpoint machinery during pre-60S-ribosome remodeling. NAT.STRUCT.MOL.BIOL. 23 37 44 2016 26619264 doi:10.1038/nsmb.3132 Rix1-Ipi1dN50-Ipi3 complex Rix1-Ipi1dN50-Ipi3 complex 2 copies of Rix1, 1 copy of Ipi1 and 2 copies of Ipi3 3 0.330 0.334 size-exclusion chromatography coupled to multi-angle light scattering (SEC-MALS) Rix1 Saccharomyces cerevisiae baker's yeast 0.8675 2 heterotrimer false Ipi3 Saccharomyces cerevisiae baker's yeast 0.06178 2 heterotrimer false Ipi1dN50 Saccharomyces cerevisiae baker's yeast 0.03787 1 heterotrimer false singleParticle particle 7.5
20 mM Hepes, 200 mM NaCl, 10 mM KCl, 10 mM MgCl2 and 1 mM DTT
 NEGATIVE
stained with 2% (w/v) uranyl acetate
 NONE OTHER FEI TECNAI F20 SPOT SCAN BRIGHT FIELD FIELD EMISSION GUN 200 1.2 62000.0 SIDE ENTRY, EUCENTRIC 2013-03-06 FEI EAGLE (4k x 4k) 25
The particles were selected using the interactive selection program BOXER
C1 18.0 OTHER IMAGIC-4D, BOXER 4267 emd_3207.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 180 180 180 0 0 0 180 180 180 297.0 297.0 297.0 90.0 90.0 90.0 X Y Z -0.13170478 0.20288256 0.00068484 0.01617203 1.65 1.65 1.65 0.084 EMDB Reconstruction of mutant Rix1-Ipi1dN50-Ipi3 complex
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